an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
L-arginino-succinate
pseudouridine
α-D-glucosamine 1-phosphate
2-amino-3-carboxymuconate-6-semialdehyde
quinolinate
N1-(5-phospho-β-D-ribosyl)glycinamide
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
thiamine phosphate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
2-dehydro-3-deoxy-D-gluconate 6-phosphate
autoinducer 2
(R)-pantothenate
coproporphyrinogen III
(L-threonylcarbamoyl)adenylate
5-phospho-β-D-ribosylamine
DNA without lesion
hydrogen peroxide
ethanolamine
S-methyl-5'-thioadenosine
5-(methylsulfanyl)-α-D-ribose
S-ribosyl-L-homocysteine
P1,P4-bis(5'-guanosyl) tetraphosphate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
phosphoenolpyruvate
D-gluconate 6-phosphate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
1,6-anhydro-N-acetyl-β-muramate
acetyl phosphate
6-phospho D-glucono-1,5-lactone
N-acetyl-D-muramate 6-phosphate
glycerone phosphate
2-amino-2-deoxy-D-gluconate 6-phosphate
methylsalicylate
salicyl alcohol
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate
(R)-mevalonate diphosphate
isopentenyl diphosphate
(R)-mevalonate
(R)-5-phosphomevalonate
N-acetyl-D-galactosamine 6-phosphate
D-galactosamine-6-phosphate
β-nicotinate D-ribonucleotide
nicotinate adenine dinucleotide
(R)-4'-phosphopantothenate
(R)-4'-phosphopantothenoyl-L-cysteine
4'-phosphopantetheine
pseudouridine 5'-phosphate
prenyl diphosphate
H2O
CO2
carbamoyl phosphate
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
ammonia
2-iminosuccinate
L-alanyl-γ-D-glutamyl-meso-diaminopimelate
D-alanyl-D-alanine
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
DNA with lesion
protoheme
protoporphyrin IX
uroporphyrinogen-III
protoporphyrinogen IX
oxygen
sn-glycerol 3-phosphate
2,3-diphospho-D-glycerate
3-phospho-D-glyceroyl-phosphate
3-phospho-D-glycerate
2-phospho-D-glycerate
α-D-glucosamine 6-phosphate
N-acetyl-D-mannosamine 6-phosphate
1-oleoyl-2-lyso-glycerone phosphate
5,10-methenyltetrahydrofolate mono-L-glutamate
superoxide
dimethyl sulfide
5-(2-hydroxyethyl)-4-methylthiazole
4-methyl-5-(2-phosphooxyethyl)thiazole
Na+
H+
ammonium
Fe2+
trimethyl sulfonium
hydrogencarbonate
selenide
phosphate
diphosphate
sn-glycero-3-phosphoethanolamine
glycerophosphoserine
glycerophosphoglycerol
L-homocysteine
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
5-amino-4-imidazolecarboxyamide
nicotinamide
methyl (indol-3-yl)acetate
(indol-3-yl)acetate
2-methylacetoacetyl-CoA
linoleoyl-CoA
α-linolenoyl-CoA
acetyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
3'-dephospho-CoA
crotonyl-CoA
phytenoyl-CoA
oleoyl-CoA
(3R)-3-hydroxybutanoyl-CoA
(Z)-15-tetracosenoyl-CoA
butanoyl-CoA
propanoyl-CoA
decanoyl-CoA
octanoyl-CoA
palmitoyl-CoA
pristanoyl-CoA
3-oxopentanoyl-CoA
acetoacetyl-CoA
all-trans-retinyl palmitate
(S)-NADHX
(R)-NADHX
NADPH
NADH
NADP+
NAD+
coenzyme A
tetrahydropteroyl tri-L-glutamate
5,6,7,8-tetrahydrofolate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
7,8-dihydrofolate monoglutamate
nicotinate
pyridoxal
pyridoxal 5'-phosphate
pyridoxamine
pyridoxamine 5'-phosphate
pyridoxine
pyridoxine 5'-phosphate
all-trans-retinol
7,8-dihydropteroate
adenine
guanine
2'-deoxyadenosine
2'-deoxyguanosine
guanosine
adenosine
hypoxanthine
dAMP
dGMP
dITP
dGTP
dATP
dIDP
dGDP
dADP
IDP
GDP
ADP
GMP
IMP
AMP
ITP
GTP
ATP
dUDP
dUTP
dTTP
dCTP
UTP
dUMP
dTMP
dTDP
CTP
uracil
dCMP
dCDP
UDP
CDP
UDP-α-D-glucuronate
UDP-α-D-galacturonate
UDP-α-D-glucose
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-muramate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-glucosamine
cytidine
uridine
2'-deoxycytidine
thymidine
2'-deoxyuridine
UMP
CMP
preQ1
preQ0
salicyl-6-hydroxy-2-cyclohexene-on-oyl
6-hydroxy-2-cyclohexen-one-carboxylate
salicylate
fumarate
L-aspartate
(R)-lactate
(S)-lactate
formate
pyruvate
acetate
butanoate
decanoate
octanoate
(15Z)-tetracosenoate
oleate
linoleate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate
α-linolenate
phytenate
pristanate
palmitate
L-serine
L-leucine
L-glutamine
glycine
L-alanine
L-glutamate
D-glutamate
L-arginine
L-tyrosine
L-threonine
L-cysteine
D-alanine
L-citrulline
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
L-ornithine
meso-diaminopimelate
L-selenocysteine
L-methionine
D-glyceraldehyde
α-D-glucopyranose
β-D-glucopyranose
aldehydo-D-ribose
α-D-ribofuranose
β-D-ribofuranose
methanol
glycerol
(3R)-linalool
(3S)-linalool
1-oleoyl-sn-glycerol 3-phosphate
dioleoyl phosphatidate
geranyl diphosphate
mono-trans,octa-cis-decaprenyl diphosphate
trans,octacis-decaprenyl phosphate
(2E,6E)-farnesyl diphosphate
di-trans,octa-cis-undecaprenol
di-trans,octa-cis-undecaprenyl phosphate
geranylgeranyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
1-(β-D ribofuranosyl)nicotinamide
maltotriose
maltotetraose
maltohexaose
maltopentaose
sucrose
N-acetyl-α-D-muramoyl-L-alanine(1-)
N-acetylmuramate
N-acetyl-α-D-glucosamine 1-phosphate
N-acetyl-β-D-glucosamine
β-D-fructofuranose
D-xylulose
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
a peptidoglycan dimer (mycobacteria)
a peptidoglycan dimer (E. faeciums)
a peptidoglycan dimer (S. aureus)
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)
a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)
a peptidoglycan with D,D cross-link (S. aureus)
a peptidoglycan with D,D cross-links (mycobacteria)
a peptidoglycan with L,D cross-links (mycobacteria)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
sucrose 6F-phosphate
GDP-α-D-mannose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
5-phospho-α-D-ribose 1-diphosphate
β-D-fructose 1,6-bisphosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-mannopyranose 6-phosphate
β-D-glucose 6-phosphate
α-D-glucose 6-phosphate
β-D-galactose 6-phosphate
α-D-galactose 6-phosphate
D-xylulose 5-phosphate
D-ribulose 5-phosphate
α-D-ribose-1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
5'-deoxyadenosine
pppGpp
ppGpp
adenylo-succinate
cyclic-AMP
β-nicotinamide D-ribonucleotide