an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
enol-phenylpyruvate
ammonia
octadecanal
(S)-4-amino-5-oxopentanoate
(R)-2,3-dihydroxy-3-methylpentanoate
(S)-2-aceto-2-hydroxybutanoate
pseudouridine
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate
(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA
5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
(2Z,4Z)-2-hydroxyhexa-2,4-dienoate
(S)-4-hydroxy-2-oxohexanoate
(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate
N1-(5-phospho-β-D-ribosyl)glycinamide
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
2-iminoacetate
ADP-L-glycero-β-D-manno-heptose
core oligosaccharide-lipid A (E. coli K-12 core type)
oxalosuccinate
hydrogen peroxide
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA
benzoylsuccinyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol
DNA without lesion
pseudouridine 5'-phosphate
N-succinyl-L,L-2,6-diaminopimelate
3-deoxy-D-manno-octulosonate 8-phosphate
acetyl phosphate
(S)-2,3,4,5-tetrahydrodipicolinate
N-succinyl-2-amino-6-ketopimelate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
2-(α-hydroxyethyl)thiamine diphosphate
thiamine diphosphate
lipid X
3-deoxy-α-D-manno-2-octulosonate
3-methyl-2-oxobutanoate
4-methyl-2-oxopentanoate
(S)-3-methyl-2-oxopentanoate
glycerone phosphate
isopentenyl diphosphate
preuroporphyrinogen
prenyl diphosphate
porphobilinogen
phosphoenolpyruvate
3-demethylubiquinol-6
lipid A disaccharide (E. coli)
lipid IVA
5-aminolevulinate
oxaloacetate
citrate
H2O
coproporphyrinogen III
CO2
(2E,6E)-farnesyl diphosphate
(2Z)-2-aminobut-2-enoate
L-homocysteine
4-methylphenol
1-oleoyl-2-palmitoyl-phosphatidylglycerol
heptadecane
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA
3,24-dioxocholest-4-en-26-oyl-CoA
3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione
9α-hydroxyandrosta-1,4-diene-3,17-dione
androsta-1,4-diene-3,17-dione
androst-4-ene-3,17-dione
2-methylbutanoyl-CoA
(E)-2-methylcrotonoyl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
(3R)-hydroxy, 6-cis-tridecenoyl-CoA
6-cis, 3-oxo-tridecenoyl-CoA
(3R)-hydroxy, 6-trans-tridecenoyl-CoA
6-trans-3-oxo-tridecenoyl-CoA
(3R)-hydroxy, 4-trans-undecenoyl-CoA
4-trans-3-oxo-undecenoyl-CoA
(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA
5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA
(3R)-hydroxy-5-trans-dodecenoyl-CoA
(5E)-3-oxo-dodec-5-enoyl-CoA
(3S)-hydroxyadipyl-CoA
3'-dephospho-CoA
2-methylacetoacetyl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
malonyl-CoA
succinyl-CoA
acetyl-CoA
(S)-methylmalonyl-CoA
(R)-methylmalonyl-CoA
crotonyl-CoA
oleoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxyhexanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA
(S)-3-hydroxyhexadecanoyl-CoA
(3R)-3-hydroxybutanoyl-CoA
(3R)-3-hydroxypentanoyl-CoA
cerotoyl-CoA
2-carboxy-cerotoyl-CoA
butanoyl-CoA
propanoyl-CoA
3-oxoadipyl-CoA
3-oxopentanoyl-CoA
acetoacetyl-CoA
3-oxodecanoyl-CoA
3-oxohexanoyl-CoA
3-oxooctanoyl-CoA
3-oxo-(5Z)-tetradecenoyl-CoA
3-oxo-palmitoyl-CoA
FMNH2
FMN
(S)-NADHX
(R)-NADHX
NADPH
NADH
NADP+
NAD+
caldariellaquinol
ubiquinol-10
ubiquinol-7
ubiquinol-6
ubiquinol-8
ubiquinol-9
menaquinol-8
demethylmenaquinol-8
3-demethylubiquinol-10
3-demethylubiquinol-7
3-demethylubiquinol-8
3-demethylubiquinol-9
caldariellaquinone
coenzyme A
7,8-dihydrofolate monoglutamate
5,6,7,8-tetrahydrofolate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
2'-deoxyadenosine
2'-deoxyguanosine
dAMP
dGMP
dITP
dGTP
dATP
dIDP
dGDP
dADP
IDP
GDP
ADP
XMP
IMP
GMP
AMP
ITP
GTP
ATP
uracil
dTTP
dCTP
UTP
CTP
dUTP
dUMP
dUDP
dCMP
dCDP
UDP
CDP
dTMP
dTDP
CMP
UMP
UDP-α-D-galactose
UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine
UDP-N-acetyl-α-D-mannosamine
UDP-α-D-glucose
UDP-α-D-glucuronate
UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine
UDP-N-acetyl-α-D-muramate
UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-mannosaminuronate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-glucosamine
preQ1
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydropteroate
preQ0
3-hexaprenyl-4-hydroxybenzoate
4-hydroxybenzoate
4-aminobenzoate
2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol
L-α-amino-ε-keto-pimelate
L-glutamine
L-threonine
L-tyrosine
L-serine
glycine
L-lysine
L-glutamate
L-aspartate
L-phenylalanine
D-alanine
D-glutamate
L-aspartyl-4-phosphate
L-homoserine
L-aspartate 4-semialdehyde
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
meso-diaminopimelate
L-methionine
L-leucine
L-isoleucine
L-valine
L-alanine
L,L-diaminopimelate
acetate
3-phenyl-2-oxopropanoate
pyruvate
glyoxylate
2-oxoglutarate
2-oxobutanoate
succinate
fumarate
(S)-malate
cis-aconitate
D-threo-isocitrate
formate
propanoate
butanoate
1-propanal
1-oleoyl-2-lyso-glycerone phosphate
1-oleoyl-sn-glycerol 3-phosphate
dioleoyl phosphatidate
phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)
trans,octacis-decaprenyl phosphate
di-trans,octa-cis-undecaprenyl phosphate
all-trans-nonaprenyl diphosphate
all-trans-octaprenyl diphosphate
all-trans-hexaprenyl diphosphate
all-trans-heptaprenyl diphosphate
all-trans-decaprenyl diphosphate
mono-trans,octa-cis-decaprenyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
3-nonaprenyl-4-hydroxybenzoate
3-octaprenyl-4-hydroxybenzoate
3-heptaprenyl-4-hydroxybenzoate
3-decaprenyl-4-hydroxybenzoate
galactosyl-glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate
glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate
glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate
glucosyl-(heptosyl)2-Kdo2-lipid A-phosphate
glucosyl-(heptosyl)2-Kdo2-lipid A
(heptosyl)2-Kdo2-lipid A
heptosyl-Kdo2-lipid A
α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A
α-Kdo-(2→6)-lipid IVA
galactosyl-(glucosyl)2-(heptosyl)3-Kdo2-lipid A-bisphosphate
galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid A-bisphosphate
α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA
N-acetyl-α-D-mannosamine
N-acetyl-α-D-glucosamine 1-phosphate
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
a peptidoglycan dimer (mycobacteria)
decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
a peptidoglycan with D,D cross-links (mycobacteria)
a peptidoglycan with L,D cross-links (mycobacteria)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
CMP-3-deoxy-β-D-manno-octulosonate
D-glyceraldehyde 3-phosphate
β-D-fructose 1,6-bisphosphate
D-fructose 6-phosphate
β-D-fructofuranose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-mannopyranose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
1-deoxy-D-xylulose 5-phosphate
aldehydo-D-arabinose 5-phosphate
D-ribulose 5-phosphate
α-D-mannose 1-phosphate
adenylo-succinate
pppGpp
ppGpp
5'-deoxyadenosine
2-sulfanyl-N6-dimethylallyladenosine37 in tRNA
2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA
2-iminobutanoate
D-alanyl-D-alanine
DNA with lesion
protoheme
protoporphyrinogen IX
protoporphyrin IX
uroporphyrinogen-III
uroporphyrinogen-I
coproporphyrinogen I
oxygen
sn-glycerol 3-phosphate
3-phospho-D-glyceroyl-phosphate
2-phospho-D-glycerate
3-phospho-D-glycerate
5,10-methenyltetrahydrofolate mono-L-glutamate
2-methoxy-6-(all-trans-octaprenyl)phenol
superoxide
dimethyl sulfide
L-cysteate
3-sulfopyruvate
trimethyl sulfonium
hydrogencarbonate
phosphate
diphosphate
ammonium
H+
Fe2+