an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
H2O
phosphoenolpyruvate
DNA without lesion
glycolate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
formate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
D-gluconate 6-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
N5-carboxyaminoimidazole ribonucleotide
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
5-phospho-β-D-ribosylamine
N1-(5-phospho-β-D-ribosyl)glycinamide
glycerone phosphate
acetyl phosphate
prenyl diphosphate
selenophosphate
CO2
coproporphyrinogen III
isopentenyl diphosphate
2-C-methyl-D-erythritol 4-phosphate
L-selenocystathionine
2-C-methyl-D-erythritol-2,4-cyclodiphosphate
(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
(R)-4'-phosphopantothenate
(R)-pantothenate
β-D-ribosylnicotinate
β-nicotinate D-ribonucleotide
thiamine diphosphate
2-(α-hydroxyethyl)thiamine diphosphate
hydrogen peroxide
O-D-alanyl-poly(ribitol phosphate)
poly(ribitol phosphate)
nicotinate adenine dinucleotide
thiamine phosphate
ethanolamine
xanthine
phosphocholine
choline
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
isochorismate
D-glycero-β-D-manno-heptose 1-phosphate
D-glycero-β-D-manno-heptose 1,7-bisphosphate
4-aminobutanoate
orotidine 5'-phosphate
(S)-dihydroorotate
carbamoyl phosphate
S-ribosyl-L-homocysteine
5-(methylsulfanyl)-α-D-ribose
S-methyl-5'-thioadenosine
α-D-glucosamine 1-phosphate
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
O-ureido-L-homoserine
carboxyphosphate
oxaloacetate
quinolinate
6-phospho D-glucono-1,5-lactone
autoinducer 2
glutathione disulfide
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
aminoacetone
1,2-dihydro-β-NADP
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
ammonia
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
D-alanyl-D-alanine
carbamate
L-citrulline
L-cysteine
L-methionine
L-aspartate
L-leucine
L-alanine
glycine
L-serine
L-glutamate
L-glutamine
L-asparagine
L-tyrosine
L-threonine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
L-homocysteine
L-aspartate 4-semialdehyde
L-homoserine
L-canaline
L-ornithine
meso-diaminopimelate
seleno-L-homocysteine
L-2-amino-3-oxobutanoate
L-aspartyl-4-phosphate
O-acetyl-L-homoserine
N-carbamoyl-L-aspartate
L-cystathionine
D-alanine
D-glutamate
2,3-dihydroxybenzoate
acetate
orotate
oleate
(R)-lactate
pyruvate
2-oxoglutarate
chorismate
fumarate
(S)-malate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
5-amino-4-imidazolecarboxyamide
(2E,6E)-farnesyl diphosphate
trans,octacis-decaprenyl phosphate
di-trans,octa-cis-undecaprenyl phosphate
all-trans-heptaprenyl diphosphate
geranylgeranyl diphosphate
di-trans,octa-cis-undecaprenol
1-(oleoyl)-sn-glycero-3-phosphoethanolamine
1-oleoyl-sn-glycerol 3-phosphate
1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate
1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate
1-(β-D ribofuranosyl)nicotinamide
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-N-acetyl-α-D-muramate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine
UDP-α-D-galactose
UDP-α-D-glucose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-glucosamine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
D-galactosylononitol
galactinol
5-phospho-α-D-ribose 1-diphosphate
D-ribitol 5-phosphate
D-sedoheptulose 7-phosphate
D-erythrose 4-phosphate
α-D-glucopyranose 1-phosphate
N-acetyl-α-D-glucosamine 1-phosphate
β-D-fructofuranose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 6-phosphate
β-D-fructose 1,6-bisphosphate
D-fructose 6-phosphate
α-D-ribose-1-phosphate
5-fluoro-5-deoxy-D-ribose 1-phosphate
2-deoxy-α-D-ribose 1-phosphate
D-xylulose 5-phosphate
D-ribulose 5-phosphate
D-glyceraldehyde 3-phosphate
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
D-glyceraldehyde
glycerol
myo-inositol
D-ononitol
1-dodecanol
butan-1-ol
methylglyoxal
acetaldehyde
butan-1-al
urate
guanine
adenine
AMP
IMP
GMP
XMP
ATP
GTP
ADP
GDP
dADP
dGDP
dATP
dGTP
hypoxanthine
adenosine
inosine
guanosine
xanthosine
2'-deoxyinosine
2'-deoxyguanosine
2'-deoxyadenosine
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate
2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin
(7,8-dihydropterin-6-yl)methyl diphosphate
6-(hydroxymethyl)-7,8-dihydropterin
tetrahydropteroyl tri-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
thio-molybdenum cofactor
MoO2-molybdopterin cofactor
uracil
thymine
preQ1
isoguanine
dUMP
dUTP
CTP
UDP
dCDP
dCMP
CDP
UTP
dUDP
dTMP
dTDP
dCTP
dTTP
CDP-choline
UMP
CMP
uridine
cytidine
2'-deoxyuridine
2'-deoxycytidine
thymidine
coenzyme A
adenylo-succinate
cyclic-AMP
pppGpp
5'-deoxyadenosine
ppGpp
5-chloro-5-deoxyribose 1-phosphate
5'-chloro-5'-deoxyadenosine
8-oxo-GTP
8-oxo-dGTP
2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA
2-sulfanyl-N6-dimethylallyladenosine37 in tRNA
β-nicotinamide D-ribonucleotide
5-hydroxy-CTP
2-hydroxy-dATP
cyclic di-3',5'-guanylate
NADP+
NAD+
NADPH
NADH
5'-deoxy-5'-fluoroadenosine
(S)-NADHX
(R)-NADHX
thiamine
nicotinate
cholate
glycocholate
acetyl-CoA
(E)-glutaconyl-CoA
(R)-2-hydroxyglutaryl-CoA
malonyl-CoA
oleoyl-CoA
hexadecanedioyl-CoA
18-hydroxyoleoyl-CoA
glutathione
(R)-S-lactoylglutathione
dodecyl sulfate
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
methanethiol
spermidine
putrescine
2-aminoprop-2-enoate
2-iminopropanoate
glycerophosphoserine
glycerophosphoglycerol
sn-glycero-3-phosphoethanolamine
superoxide
hydroxyl radical
sulfate
molybdate
selenide
hydrogencarbonate
OH-
chloride
phosphonate
phosphate
diphosphate
Fe3+
Zn2+
Mo2+
Co2+
Mg2+
Fe2+
ammonium
H+
2-chloroacetate
preQ0
3-phospho-D-glyceroyl-phosphate
3-phospho-D-glycerate
2-phospho-D-glycerate
sn-glycerol 3-phosphate
2-iminosuccinate
oxygen
hydrogen sulfide
protoporphyrinogen IX
Mg-protoporphyrin
protoporphyrin IX
uroporphyrinogen-III
protoheme
DNA with lesion