ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C11543

H2O

C928

CO2

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C10349

glycerone phosphate

C11479

phosphoenolpyruvate

C6444

oxaloacetate

C3821

5-methylcytosine

C1078

(S)-2-amino-6-oxohexanoate

C11539

xanthine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C11639

succinate semialdehyde

C11557

urocanate

C1285

4-imidazolone-5-propanoate

C13850

hydrogenobyrinate a,c-diamide

C6361

acetoacetate

C14218

L-β-lysine

C15181

(S)-5-amino-3-oxohexanoate

C623

(3S,5S)-3,5-diaminohexanoate

C873

coproporphyrinogen III

C3262

3-methyl-2-oxobutanoate

C3319

4-methyl-2-oxopentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C11800

(R)-pantothenate

C1268

(R)-4'-phosphopantothenate

C11701

α-D-ribose 1,5-bisphosphate

C927

carbon monoxide

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C13627

DNA without lesion

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C11849

norspermidine

C13257

carboxynorspermidine

C14924

carboxyphosphate

C2191

carbamoyl phosphate

C11988

mesaconate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C1353

3-phosphooxypyruvate

C1528

2-dehydropantoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C13702

1-piperideine 6-carboxylate

C1024

aminoacetone

C9431

1,2-dihydro-β-NADP

C1010

ammonia

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C5032

carbamate

C5583

L-methionine

C12067

glycine

C5596

L-aspartate

C5575

L-tryptophan

C5607

L-glutamate

C5609

L-glutamine

C5605

L-histidine

C5579

L-serine

C5584

L-lysine

C5603

L-isoleucine

C5577

L-threonine

C5571

L-valine

C5588

L-leucine

C5573

L-tyrosine

C5597

L-alanine

C15292

S-adenosyl-L-methionine

C12245

L-homoserine

C12247

L-homocysteine

C12201

L-2-amino-3-oxobutanoate

C12065

L-saccharopine

C11955

O-acetyl-L-homoserine

C6532

(2S, 3S)-3-methylaspartate

C3402

3-phospho-L-serine

C11435

(R)-β-lysine

C11441

β-alanine

C11517

acetate

C11482

(R)-pantoate

C951

4-hydroxybutanoate

C6185

(R)-lactate

C11476

(R)-glycerate

C3308

pyruvate

C3421

formate

C3420

propanoate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C7189

GDP-β-L-fucose

C8666

UDP-α-D-galactose

C7780

UDP-α-D-glucose

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7444

UDP-N-acetyl-α-D-glucosamine

C10338

5-phospho-α-D-ribose 1-diphosphate

C8815

α-D-galactose 1-phosphate

C8811

α-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2989

β-D-fructofuranose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C6661

sucrose 6G-phosphate

C973

D-ribulose-1,5-bisphosphate

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C8835

β-D-fructofuranose

C2108

β-D-galactopyranose

C2109

α-D-galactopyranose

C9494

D-glyceraldehyde

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C10690

maltopentaose

C10691

maltohexaose

C10688

maltotriose

C10689

maltotetraose

C10692

maltoheptaose

C6090

methylglyoxal

C3500

acetaldehyde

C10048

caldariellaquinone

C1869

caldariellaquinol

C12836

phenol

C8413

indole

C9454

adenine

C9455

guanine

C7809

AMP

C7811

XMP

C7741

IMP

C7827

GMP

C7745

GTP

C7844

ATP

C7757

ADP

C7795

GDP

C7823

dADP

C7807

dGDP

C7783

dATP

C7751

dGTP

C7785

hypoxanthine

C15088

adenosine

C15091

inosine

C15085

guanosine

C15094

xanthosine

C7755

2'-deoxyinosine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C12730

7,8-dihydroneopterin 3'-triphosphate

C8739

uracil

C8707

cytosine

C10601

thymine

C9540

preQ1

C8744

dTMP

C8770

dUMP

C8724

dUTP

C8761

CTP

C8760

UTP

C8752

dUDP

C8732

CDP

C8733

dCDP

C8720

dTDP

C8764

dTTP

C8772

dCTP

C6945

5-fluorouracil

C9874

cob(I)alamin

C5221

adenosylcobalamin

C10614

coenzyme A

C11254

5-chloro-5-deoxyribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C5552

5'-deoxyadenosine

C10288

adenylo-succinate

C4018

NADP+

C4020

NAD+

C14497

NADPH

C14500

NADH

C7306

5'-deoxy-5'-fluoroadenosine

C9773

5-fluorocytosine

C5392

(S)-NADHX

C5394

(R)-NADHX

C4901

succinyl-CoA

C5298

acetyl-CoA

C5302

4-hydroxybutanoyl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C4937

3'-dephospho-CoA

C2008

acetoacetyl-CoA

C1177

propanoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C1337

crotonyl-CoA

C5920

(R)-methylmalonyl-CoA

C5919

(S)-methylmalonyl-CoA

C4678

glutathione

C4580

(R)-S-lactoylglutathione

C3978

thiocyanate

C6524

2-aminoprop-2-enoate

C6708

2-iminopropanoate

C7016

sulfite

C7024

thiosulfate

C7036

hydrogencarbonate

C7034

hydrogensulfite

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C11009

Mg2+

C11006

Co2+

C11023

Fe2+

C4328

ammonium

C4320

H+

C13422

hydrogen cyanide

C13354

preQ0

C2017

α-D-glucosamine 6-phosphate

C6437

3-phospho-D-glyceroyl-phosphate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C7118

hydrogen sulfide

C9865

Mg-protoporphyrin

C7676

protoporphyrin IX

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C6624

protoheme

C9828

cob(II)yrinate a,c-diamide

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C10799

DNA with lesion