an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-amino-3-carboxymuconate-6-semialdehyde

2-carboxy-L-xylonolactone

ammonia

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

2-carboxy-L-threo-pentonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

H₂O

xanthine

CO₂

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

nicotinate adenine dinucleotide

phosphoenolpyruvate

2-amino-2-deoxy-D-gluconate 6-phosphate

glycerone phosphate

orotidine 5'-phosphate

guanidinoacetate

S-ribosyl-L-homocysteine

β-nicotinate D-ribonucleotide

acetyl phosphate

DNA without lesion

S-acetyldihydrolipoamide

dihydrolipoamide

ethanolamine

(lipoyl)adenylate

β-D-ribosylnicotinate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

hydrogen peroxide

quinolinate

autoinducer 2

carbamoyl phosphate

L-dehydro-ascorbate

dehydroascorbate (bicyclic form)

3-keto-L-gulonate 6-phosphate

2,3-dioxo-L-gulonate

3-keto-L-gulonate

(S)-dihydroorotate

L-methionine

glycine

L-leucine

L-asparagine

L-glutamate

L-glutamine

L-serine

L-aspartate

L-tyrosine

N-carbamoyl-L-aspartate

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-homocysteine

creatine

ADP

dADP

GDP

dGDP

ATP

AMP

2'-deoxyadenosine

2'-deoxyguanosine

hypoxanthine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

GTP

dATP

dGTP

GMP

IMP

XMP

adenylo-succinate

GDP-α-D-mannose

UDP-α-D-glucose

adenine

guanine

thymine

uracil

dTMP

dUMP

dCMP

dCDP

dUDP

dTDP

dUTP

dCTP

dTTP

CDP

UDP

β-nicotinamide D-ribonucleotide

CTP

UTP

UMP

CMP

NADP⁺

NAD⁺

NADPH

NADH

2'-deoxyuridine

thymidine

2'-deoxycytidine

adenosine

inosine

guanosine

xanthosine

uridine

cytidine

5'-deoxy-5'-fluoroadenosine

1-(β-D ribofuranosyl)nicotinamide

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

β-D-fructofuranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

N-acetyl-β-D-mannosamine

N-acetyl-β-neuraminate

glycerol

D-mannitol 1-phosphate

sucrose

dioleoyl phosphatidate

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

acetaldehyde

pyruvate

acetate

orotate

formate

(S)-lactate

fumarate

urate

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

FMN

riboflavin

FMNH₂

reduced riboflavin

L-ascorbate

nicotinate

nicotinamide

coenzyme A

(R)-lipoate

(R)-NADHX

(S)-NADHX

acetyl-CoA

3'-dephospho-CoA

oleoyl-CoA

hexadecanedioyl-CoA

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

hydrogencarbonate

phosphate

diphosphate

ammonium

H⁺

Na⁺

monodehydroascorbate radical

5,10-methenyltetrahydrofolate mono-L-glutamate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

oxygen

DNA with lesion

2-iminosuccinate