an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-carboxy-L-threo-pentonate

ammonia

2-carboxy-L-xylonolactone

pseudouridine

2-amino-3-carboxymuconate-6-semialdehyde

quinolinate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

3-keto-L-gulonate

2,3-dioxo-L-gulonate

L-dehydro-ascorbate

dehydroascorbate (bicyclic form)

hydrogen peroxide

2-dehydro-3-deoxy-D-gluconate 6-phosphate

4'-phosphopantetheine

N,N-dimethyl-1,4-phenylenediamine

(lipoyl)adenylate

DNA without lesion

β-D-ribosylnicotinate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

acetyl phosphate

ethanolamine

β-nicotinate D-ribonucleotide

S-methyl-5'-thioadenosine

5-(methylsulfanyl)-α-D-ribose

pseudouridine 5'-phosphate

3-keto-L-gulonate 6-phosphate

phosphoenolpyruvate

nicotinate adenine dinucleotide

xanthine

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

glycerone phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

dihydrolipoamide

S-acetyldihydrolipoamide

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

CO₂

H₂O

aniline

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

acetamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

nicotinamide

(indol-3-yl)acetate

3'-dephospho-CoA

acetyl-CoA

oleoyl-CoA

hexadecanedioyl-CoA

O-acetyl-L-carnitine

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

(R)-lipoate

coenzyme A

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

nicotinate

L-ascorbate

L-carnitine

guanine

adenine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

xanthosine

guanosine

inosine

adenosine

hypoxanthine

dAMP

dGMP

dGTP

dATP

dGDP

dADP

GDP

ADP

XMP

IMP

GMP

AMP

GTP

ATP

dCTP

dUTP

dTTP

dTDP

dCMP

dUMP

dTMP

dUDP

UDP

dCDP

CDP

uracil

UTP

CTP

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

CMP

UMP

UDP-α-D-glucose

urate

L-serine

glycine

L-tyrosine

L-glutamine

L-aspartate

L-glutamate

N-formyl-L-methionine

L-homocysteine

S-adenosyl-L-methionine

L-methionine

L-leucine

acetate

pyruvate

fumarate

(S)-lactate

formate

propanoate

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

acetaldehyde

glycerol

D-mannitol 1-phosphate

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-(β-D ribofuranosyl)nicotinamide

β-D-fructofuranose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

L-xylulose 5-phosphate

D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

sucrose

adenylo-succinate

β-nicotinamide D-ribonucleotide

2-iminosuccinate

DNA with lesion

oxygen

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

4-dimethylaminophenylazobenzene

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

5,10-methenyltetrahydrofolate mono-L-glutamate

monodehydroascorbate radical

dimethyl sulfide

trimethyl sulfonium

phosphate

diphosphate

ammonium

H⁺