an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
S-ribosyl-L-homocysteine
autoinducer 2
enolaldehyde
5,6-dimethylbenzimidazole
dialurate
(R)-mevalonate diphosphate
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
enol-phenylpyruvate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
ammonia
2-(α-hydroxyethyl)thiamine diphosphate
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one
5-amino-6-(5-phospho-D-ribitylamino)uracil
acetyl phosphate
L-β-lysine
4-pyridoxolactone
(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate
4-phosphooxy-L-threonine
orotidine 5'-phosphate
(R)-4'-phosphopantothenate
(R)-4'-phosphopantothenoyl-L-cysteine
4'-phosphopantetheine
hydrogen peroxide
oxalosuccinate
S-methyl-5-thio-α-D-ribose 1-phosphate
5-deoxy-α-ribose 1-phosphate
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
carbonic acid
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
prenyl diphosphate
(R)-5-phosphomevalonate
hydrogenobyrinate
(S)-4-amino-5-oxopentanoate
5-aminolevulinate
porphobilinogen
preuroporphyrinogen
α-ribazole
α-ribazole 5'-phosphate
N-(5-phosphoribosyl)-anthranilate
cyclohex-1,5-diene-1-carbonyl-CoA
2-oxopent-4-enoate
(S)-4-hydroxy-2-oxopentanoate
(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate
(4S)-4-hydroxy-2-oxoheptanedioate
3-phosphooxypyruvate
4-amino-2-methyl-5-pyrimidinemethanol
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
phosphoenolpyruvate
5-enolpyruvoyl-shikimate 3-phosphate
itaconate
(R)-1-aminopropan-2-ol
prephenate
3-dehydroquinate
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate
(4-hydroxyphenyl)acetate
L-arginino-succinate
canavaninosuccinate
L-canavanine
anthranilate
hexulose 6-phosphate
(2S)-2-isopropyl-3-oxosuccinate
3-ethylmalate
2-oxovalerate
2-dehydropantoate
3-dehydroshikimate
butanoyl phosphate
2-phosphoglycolate
glycolate
4-(2'-carboxyphenyl)-4-oxobutyryl-CoA
1,4-dihydroxy-2-naphthoyl-CoA
(2S)-lactyl-2-diphospho-5'-guanosine
isopentenyl diphosphate
β-nicotinate D-ribonucleotide
D-erythro-imidazole-glycerol-phosphate
glycerone phosphate
thiamine phosphate
thiamine diphosphate
urea
S-adenosyl 3-(methylsulfanyl)propylamine
S-methyl-5'-thioadenosine
histidinal
histidinol
(R)-pantothenate
(R)-2,3-dihydroxy-3-methylpentanoate
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
benzoylsuccinyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
4-guanidinobutyramide
(S)-3-methyl-2-oxopentanoate
4-methyl-2-oxopentanoate
3-methyl-2-oxobutanoate
(S)-2-acetolactate
(S)-2-aceto-2-hydroxybutanoate
2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
(S)-2,3,4,5-tetrahydrodipicolinate
citrate
α-D-ribose 1,5-bisphosphate
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
coenzyme B
methanophenazine
CoB-CoM heterodisulfide
dihydromethanophenazine
(2S)-2-isopropylmalate
(2R,3S)-3-isopropylmalate
2-isopropylmaleate
3'-phosphoadenylyl-sulfate
α-D-glucosamine 1-phosphate
N-acetyl-L-glutamate 5-semialdehyde
N-acetylglutamyl-phosphate
carbamoyl phosphate
O-ureido-L-homoserine
nicotinate adenine dinucleotide
shikimate
shikimate 3-phosphate
carbon monoxide
(5S)-5-benzyl-hydantoin
(5R)-5-benzyl-hydantoin
acetoacetate
oxaloacetate
1-deoxy-L-glycero-tetrulose 4-phosphate
(R)-mevalonate
(E)-2-benzylidenesuccinyl-CoA
2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
(E)-4-coumaroyl-CoA
2,3-didehydroadipyl-CoA
adenosine 5'-phosphosulfate
adenosine 5'-phosphoselenate
5-amino-6-(D-ribitylamino)uracil
7,8-didemethyl-8-hydroxy-5-deazariboflavin
oxalate
5-phospho-β-D-ribosylamine
N1-(5-phospho-β-D-ribosyl)glycinamide
N5-carboxyaminoimidazole ribonucleotide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
4,8,12-trimethyltridecanoyl-CoA
3-oxopristanoyl-CoA
imidazole acetol-phosphate
L-histidinol phosphate
(S)-dihydroorotate
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
H2
(R)-1-amino-2-propanol O-2-phosphate
(indol-3-yl)pyruvate
(indol-3 yl)acetyl-CoA
CO2
H2O
dimethyl sulfide
5-(2-hydroxyethyl)-4-methylthiazole
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
4-methyl-5-(2-phosphooxyethyl)thiazole
coenzyme M
L-cysteate
3-sulfopyruvate
sulfate
molybdate
trithionate
OH-
hydrogensulfite
hydrogencarbonate
sulfite
selenate
nitrite
nitrate
phosphate
triphosphate
diphosphate
Co2+
Mg2+
H+
ammonium
trimethyl sulfonium
agmatine
putrescine
dehydrospermidine
spermidine
tyramine
2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
sn-glycero-3-phosphoethanolamine
5-chloro-5-deoxy-D-ribonate
5-chloro-4-hydroxy-2-oxopentanoate
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA
3,24-dioxocholest-4-en-26-oyl-CoA
phenylacetate
2-methylbutanoyl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
anthraniloyl-CoA
benzoyl-CoA
(R)-2-hydroxyglutaryl-CoA
(E)-glutaconyl-CoA
itaconyl-CoA
phenylacetyl-CoA
2-methylacetoacetyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
6-cis, 3-oxo-tridecenoyl-CoA
6-trans-3-oxo-tridecenoyl-CoA
4-trans-3-oxo-undecenoyl-CoA
(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA
5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA
(3R)-hydroxy-5-trans-dodecenoyl-CoA
(5E)-3-oxo-dodec-5-enoyl-CoA
3'-dephospho-CoA
acetyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
methylacrylyl-CoA
(2E,5Z)-tetradecenoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA
(3S)-hydroxyadipyl-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
3-hydroxyisovaleryl-CoA
(E)-2-methylcrotonoyl-CoA
2-trans,6-cis-tridecadienoyl-CoA
(3R)-hydroxy, 6-cis-tridecenoyl-CoA
(3E)-undec-2-enoyl-CoA
(3R)-hydroxy-undecanoyl-CoA
2-trans-6-trans-tridecadienoyl-CoA
(3R)-hydroxy, 6-trans-tridecenoyl-CoA
2-trans, 4-trans-undecadienoyl-CoA
(3R)-hydroxy, 4-trans-undecenoyl-CoA
2-trans-nonenoyl-CoA
(3R)-hydroxy-nonanoyl-CoA
succinyl-CoA
(S)-methylmalonyl-CoA
(R)-methylmalonyl-CoA
crotonyl-CoA
(2E)-dec-2-enoyl-CoA
(2E)-oct-2-enoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(S)-3-hydroxyhexanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(S)-3-hydroxyhexadecanoyl-CoA
(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA
(3R)-3-hydroxybutanoyl-CoA
butanoyl-CoA
propanoyl-CoA
decanoyl-CoA
octanoyl-CoA
3-oxoadipyl-CoA
3-oxopentanoyl-CoA
acetoacetyl-CoA
3-oxodecanoyl-CoA
3-oxohexanoyl-CoA
3-oxooctanoyl-CoA
3-oxo-(5Z)-tetradecenoyl-CoA
3-oxo-palmitoyl-CoA
(S)-3-hydroxy-isobutanoyl-CoA
FMNH2
FAD
FADH2
FMN
(S)-NADHX
(R)-NADHX
NADH
NADPH
NAD+
NADP+
5,10-methenyl-tetrahydrosarcinapterin
methyl-CoM
5-formyl-tetrahydrosarcinapterin
tetrahydrosarcinapterin
5-methyl-tetrahydrosarcinapterin
molybdopterin
coenzyme A
oxidized coenzyme F420-0
MoO2-molybdopterin cofactor
guanylyl molybdenum cofactor
N5-methyltetrahydromethanopterin
tetrahydromethanopterin
5-formyl-tetrahydromethanopterin
5,10-methylene-tetrahydromethanopterin
5,10-methenyltetrahydromethanopterin
tetrahydropteroyl tri-L-glutamate
5,6,7,8-tetrahydrofolate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
nicotinate
riboflavin
pyridoxal
(S)-1-pyrroline-5-carboxylate
adenine
2'-deoxyadenosine
2'-deoxyguanosine
adenosine
dAMP
dGMP
dATP
dGTP
dITP
dADP
dGDP
dIDP
GDP
IDP
ADP
IMP
GMP
AMP
ITP
ATP
GTP
dTMP
dCMP
dUMP
orotate
cytosine
uracil
dTDP
dTTP
CDP
CTP
dCDP
dCTP
dUDP
dUTP
UDP
UTP
UMP
CMP
UDP-N-acetyl-α-D-mannosamine
UDP-α-D-sulfoquinovopyranose
UDP-α-D-glucose
UDP-α-D-galactose
UDP-N-acetyl-α-D-glucosamine
cob(I)alamin
adenosylcobalamin
cobalt-precorrin-7
cobalt-precorrin-8
cobalt-precorrin-6B
cobalt-precorrin-5B
cobalt-precorrin-6A
cobalt-precorrin-4
cobalt-precorrin-5A
precorrin-8x
precorrin-3B
precorrin-4
precorrin-5
precorrin-1
precorrin-2
cobalt-precorrin-2
cobalt-precorrin-3
sirohydrochlorin
cobyrinate
6,7-dimethyl-8-(1-D-ribityl)lumazine
7,8-dihydroneopterin 2'-phosphate
7,8-dihydroneopterin
7,8-dihydroneopterin 3'-phosphate
6-(hydroxymethyl)-7,8-dihydropterin
7,8-dihydroneopterin 2',3'-cyclic phosphate
molybdopterin adenine dinucleotide
cyclic pyranopterin phosphate
(7,8-dihydropterin-6-yl)methyl diphosphate
7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
7,8-dihydropteroate
3-hexaprenyl-4-hydroxybenzoate
4-hydroxybenzoate
4-methylphenol
4-aminobenzoate
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
butanoate
decanoate
octanoate
oleate
(R)-pantoate
acetate
3-phenyl-2-oxopropanoate
3-(4-hydroxyphenyl)pyruvate
2-oxobutanoate
4-(methylsulfanyl)-2-oxobutanoate
pyruvate
2-oxoglutarate
L-α-amino-ε-keto-pimelate
L-cysteine
L-tyrosine
L-serine
glycine
L-glutamine
L-histidine
L-arginine
L-lysine
L-aspartate
L-glutamate
L-tryptophan
L-phenylalanine
D-aspartate
L-aspartyl-4-phosphate
N-acetyl-L-ornithine
N-acetyl-L-citrulline
N-acetyl-L-methionine
N-acetyl-L-glutamate
N-carbamoyl-L-aspartate
L-threonine 3-O-phosphate
3-phospho-L-serine
L-citrulline
L-glutamate-5-semialdehyde
L-homoserine
L-aspartate 4-semialdehyde
L-homocysteine
L-ornithine
L-canaline
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
meso-diaminopimelate
L-methionine
L-proline
L-alanine
L-isoleucine
L-leucine
L-valine
L,L-diaminopimelate
β-alanine
chorismate
succinate
fumarate
(S)-malate
cis-aconitate
D-threo-isocitrate
(S)-lactate
propanoate
formate
methylglyoxal
diacetyl
acetone
glycolaldehyde
hydroxypyruvaldehyde phosphate
formaldehyde
acetaldehyde
(S)-lactaldehyde
(3R)-linalool
(3S)-linalool
D-myo-inositol (1,4,5)-trisphosphate
D-myo-inositol (1,3,4)-trisphosphate
D-myo-inositol (1,3,4,5)-tetrakisphosphate
D-myo-inositol (1,4)-bisphosphate
1-(oleoyl)-sn-glycero-3-phosphoethanolamine
saturated CDP-archaeol
unsaturated CDP-archaeol
2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate
2,3-bis-O-phytanyl-sn-glycerol 1-phosphate
geranyl diphosphate
(2E,6E)-farnesyl diphosphate
phytyl diphosphate
3-nonaprenyl-4-hydroxybenzoate
3-heptaprenyl-4-hydroxybenzoate
3-decaprenyl-4-hydroxybenzoate
3-octaprenyl-4-hydroxybenzoate
geranylgeranyl diphosphate
all-trans-nonaprenyl diphosphate
all-trans-octaprenyl diphosphate
all-trans-hexaprenyl diphosphate
all-trans-heptaprenyl diphosphate
all-trans-decaprenyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
sucrose
N-acetyl-α-D-glucosamine 1-phosphate
N-acetyl-α-D-mannosamine
β-D-fructofuranose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
D-erythrose 4-phosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
5-phospho-α-D-ribose 1-diphosphate
β-D-fructose 1,6-bisphosphate
D-fructose 6-phosphate
6-deoxy-5-ketofructose 1-phosphate
β-D-fructofuranose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-mannopyranose 6-phosphate
β-D-glucose 6-phosphate
α-D-glucose 6-phosphate
D-ribulose 5-phosphate
α-D-galactose 1-phosphate
β-D-glucopyranose 1-phosphate
α-D-mannose 1-phosphate
D-ribulose-1,5-bisphosphate
GDP-α-D-mannose
GDP-4-dehydro-α-D-rhamnose
adenylo-succinate
1-(5-phospho-β-D-ribosyl)-AMP
cyclic-AMP
1-(5-phospho-β-D-ribosyl)-ATP
5'-deoxyadenosine
β-nicotinamide D-ribonucleotide
Mg-protoporphyrin
adenosylcobinamide-GDP
adenosylcobalamin 5'-phosphate
adenosyl-cobinamide phosphate
cob(I)yrinate a,c-diamide
cob(I)inamide
adenosylcobinamide
cob(II)yrinate c-monoamide
cob(II)yrinate a,c-diamide
adenosyl-cob(III)yrinate a,c-diamide
adenosylcobyrate
cobalt-sirohydrochlorin
cobalt-factor III
protoheme
uroporphyrinogen-I
protoporphyrinogen IX
protoporphyrin IX
uroporphyrinogen-III
S0
oxygen
hydrogen sulfide
sn-glycerol 1-phosphate
sn-glycerol 3-phosphate
2,3-diphospho-D-glycerate
3-phospho-D-glyceroyl-phosphate
2-phospho-D-glycerate
3-phospho-D-glycerate
(2S)-2-phospholactate
(2R)-2,3-dihydroxy-3-methylbutanoate
(R)-citramalate
5,10-methenyltetrahydrofolate mono-L-glutamate
2-octaprenylphenol