an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

ammonia

quinolinate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

hypotaurine

6-phospho D-glucono-1,5-lactone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

imidazole acetaldehyde

4-imidazoleacetate

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

3-methoxy-4-hydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetaldehyde

prop-2-ynal

propynoate

D-glucurono-6,3-lactone

4-acetamidobutanal

4-acetamidobutanoate

dimethylsulfoniopropanoate

propanoyl phosphate

(lipoyl)adenylate

DNA without lesion

4-methylumbelliferyl glucoside

4-hydroxybenzaldehyde

scopolin

cis-coumarinic acid-β-D-glucoside

xanthine

ethanolamine

O-phosphoethanolamine

phosphocholine

S-methyl-5'-thioadenosine

5-(methylsulfanyl)-α-D-ribose

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

hydrogen peroxide

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

dihydrolipoamide

S-acetyldihydrolipoamide

acetyl phosphate

4'-phosphopantetheine

phosphoenolpyruvate

CO₂

carbamoyl phosphate

N-carbamoylputrescine

N-acetyl-D-muramate 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

dihydroxyacetone

glycerone phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

H₂O

2-iminosuccinate

2-iminobutanoate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-homocysteine

DNA with lesion

hydrogen cyanide

oxygen

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

5,10-methenyltetrahydrofolate mono-L-glutamate

N-acetyl-β-neuraminate

dimethyl sulfide

3-dimethylsulfoniopropionaldehyde

2-sulfinoacetaldehyde

trimethyl sulfonium

sulfite

hydrogensulfite

phosphonate

phosphate

diphosphate

ammonium

H⁺

Mg²⁺

choline

(2Z)-2-aminobut-2-enoate

agmatine

spermidine

putrescine

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphocholine

sn-glycero-3-phosphoethanolamine

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

nicotinamide

(indol-3-yl)acetate

acetyl-CoA

3'-dephospho-CoA

oleoyl-CoA

propanoyl-CoA

hexadecanedioyl-CoA

tributyrin

1,2-dibutyrin

FMN

FAD

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

(R)-lipoate

coenzyme A

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

riboflavin

nicotinate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

adenine

guanine

2'-deoxyadenosine

2'-deoxyguanosine

2'-deoxyinosine

inosine

guanosine

xanthosine

adenosine

hypoxanthine

dAMP

dGMP

dGTP

dATP

dGDP

dADP

adenosine tetraphosphate

GDP

ADP

XMP

IMP

GMP

AMP

GTP

ATP

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dCTP

dTTP

CDP-choline

dTDP

UTP

CTP

dTMP

dUMP

cytidine-3'-monophosphate

uridine 3'-monophosphate

dCMP

dCDP

UDP

CDP

uracil

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

UMP

CMP

coumarin

scopoletin

4-methylumbelliferone

taxiphyllin

linustatin

neolinustatin

linamarin

lotaustralin

2-hydroxy-2-methylpropanenitrile

(2R)-2-hydroxy-2-methylbutanenitrile

vanillyl mandelate

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

3,4-dihydroxyphenylacetate

coumarinate

4-aminobenzoate

L-serine

glycine

L-glutamine

L-leucine

L-alanine

L-glutamate

L-aspartate

L-threonine

L-tyrosine

L-asparagine

L-cysteine

D-alanine

S-adenosyl-L-methionine

L-methionine

fumarate

D-glucarate

(R)-lactate

(S)-lactate

pyruvate

acetate

formate

propanoate

butanoate

octanoate

(2E,6E)-farnesoate

oleate

phytenate

2-oxobutanoate

(2E,6E)-farnesal

1-octanal

acetaldehyde

(S)-lactaldehyde

phytenal

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

glycerol

D-mannitol 1-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

sucrose

β-D-cellobiose

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

β-D-fructofuranose

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

sucrose 6^F-phosphate

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

adenylo-succinate

adenosine 3'-monophosphate

guanosine 3'-monophosphate

adenosine pentaphosphate

β-nicotinamide D-ribonucleotide