an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

bisorganyltrisulfane

enol-phenylpyruvate

ammonia

glutathione disulfide

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

2-amino-3-carboxymuconate-6-semialdehyde

urea

acetoacetate

2-iminoacetate

N⁵-carboxyaminoimidazole ribonucleotide

dialurate

(R)-1-amino-2-propanol O-2-phosphate

6-phospho D-glucono-1,5-lactone

acetyl phosphate

4-pyridoxolactone

oxaloacetate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

preuroporphyrinogen

(S)-4-amino-5-oxopentanoate

1-deoxy-L-glycero-tetrulose 4-phosphate

L-histidinol phosphate

(L-threonylcarbamoyl)adenylate

2-isopropylmaleate

(S)-2,3,4,5-tetrahydrodipicolinate

α-ribazole

3-phosphooxypyruvate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

D-gluconate 6-phosphate

(S)-dihydroorotate

L-canavanine

4-amino-4-deoxychorismate

DNA without lesion

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

2-oleoylglycerol

coproporphyrinogen III

hydrogen peroxide

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

orotidine 5'-phosphate

2-C-methyl-D-erythritol 4-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate

shikimate 3-phosphate

3-dehydroshikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

isopentenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

(R)-pantothenate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

γ-L-glutamyl 5-phosphate

hydrogen selenide

O-acetyl-L-serine

5-aminolevulinate

porphobilinogen

anthranilate

N-(5-phosphoribosyl)-anthranilate

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

hydroxypyruvate

2-dehydropantoate

histidinal

histidinol

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

prenyl diphosphate

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

coenzyme B

methanophenazine

CoB-CoM heterodisulfide

dihydromethanophenazine

carbon monoxide

N-Formyl-L-kynurenine

carbamoyl phosphate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

phosphoenolpyruvate

L-β-lysine

5-carboxymethyl-2-hydroxymuconate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

quinolinate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

thiamine phosphate

thiamine diphosphate

4'-phosphopantetheine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

H₂

(2S)-4-acetamido-2-aminobutanoate

ectoine

glycerone phosphate

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

arsenite

prephenate

selenophosphate

carbonic acid

CO₂

H₂O

nitric oxide

dimethyl sulfide

S-(hydroxymethyl)glutathione

thiocyanate

glutathione

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

coenzyme M

hydrogensulfite

sulfite

selenide

thiosulfate

nitrite

nitrate

hydrogencarbonate

phosphate

triphosphate

diphosphate

H⁺

ammonium

Co²⁺

Fe²⁺

Mg²⁺

trimethyl sulfonium

(2Z)-2-aminobut-2-enoate

glycine betaine

acetamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

(indol-3-yl)acetate

(S)-3-aminobutanoyl-CoA

isobutanoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

succinyl-CoA

3'-dephospho-CoA

acetyl-CoA

crotonyl-CoA

(S)-malyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

butanoyl-CoA

propanoyl-CoA

acetoacetyl-CoA

D-glucono-1,5-lactone

FAD

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

riboflavin

nicotinate

pyridoxal

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

menadione

(S)-1-pyrroline-5-carboxylate

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-5A

precorrin-2

precorrin-1

precorrin-6B

precorrin-7

precorrin-8x

cobalt-precorrin-3

cobalt-precorrin-4

sirohydrochlorin

cobyrinate

cob(I)alamin

adenosylcobalamin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

adenine

guanine

2'-deoxyadenosine

2'-deoxyguanosine

guanosine

adenosine

hypoxanthine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

XMP

IMP

GMP

AMP

ITP

GTP

ATP

dCMP

orotate

uracil

dUMP

dTMP

dUTP

dTDP

dTTP

dCTP

dUDP

UDP

dCDP

CDP

UTP

CTP

UDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CMP

UMP

preQ₁

preQ₀

(indole-3-yl)acetonitrile

hydrogen cyanide

4-hydroxybenzoate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

4-methylphenol

4-aminobenzoate

chorismate

fumarate

succinate

L-aspartate

(S)-malate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

D-threo-isocitrate

(S)-lactate

(R)-lactate

(R)-glycerate

pyruvate

formate

acetate

propanoate

butanoate

D-gluconate

(R)-pantoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

L-α-amino-ε-keto-pimelate

L-kynurenine

L-cysteine

L-tyrosine

L-serine

L-threonine

glycine

L-glutamine

N^ω-hydroxy-L-arginine

L-lysine

L-arginine

L-histidine

L-glutamate

L-tryptophan

D-alanine

L-aspartyl-4-phosphate

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

O-acetyl-L-homoserine

3-phospho-L-serine

L-citrulline

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-homoserine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

L-ornithine

L-homocysteine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

meso-diaminopimelate

L-selenocysteine

L-methionine

L-isoleucine

L-leucine

L-valine

L-alanine

L-proline

L-cystathionine

L,L-diaminopimelate

L-2,4-diaminobutanoate

β-alanine

methylglyoxal

diacetyl

glycolaldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

formaldehyde

acetaldehyde

ethanol

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

(2E,6E)-farnesyl diphosphate

3-octaprenyl-4-hydroxybenzoate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

sucrose

keto-D-fructose

β-D-fructofuranose

D-xylulose

ADP-α-D-glucose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

sucrose 6^F-phosphate

5'-deoxyadenosine

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

pppGpp

ppGpp

cyclic di-3',5'-guanylate

2-iminobutanoate

2-iminosuccinate

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine

DNA with lesion

ethylphosphate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

cobalt-factor III

cobalt-sirohydrochlorin

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

adenosylcobyrate

Mg-protoporphyrin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

protoheme

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

siroheme

oxygen

hydrogen sulfide

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2-O-(α-D-mannosyl)-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate