an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
acetyl phosphate
quinolinate
(indol-3-yl)pyruvate
(indol-3 yl)acetyl-CoA
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
DNA without lesion
3-oxopropanoate
4-aminobutanoate
succinate semialdehyde
ethanolamine
2-dehydropantoate
carbamoyl phosphate
(S)-2-acetolactate
(S)-2-aceto-2-hydroxybutanoate
α-ribazole
α-ribazole 5'-phosphate
4-(β-D-ribofuranosyl)hydroxybenzene 5'-phosphate
D-erythro-imidazole-glycerol-phosphate
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
(R)-4'-phosphopantothenoyl-L-cysteine
4'-phosphopantetheine
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA
hydrogenobyrinate
hydrogenobyrinate a,c-diamide
(S)-3-methyl-2-oxopentanoate
coenzyme B
CoB-CoM heterodisulfide
S-methyl-5'-thioadenosine
S-methyl-5-thio-α-D-ribose 1-phosphate
5-deoxy-α-ribose 1-phosphate
S-Inosyl-L-homocysteine
hexulose 6-phosphate
N1-(5-phospho-β-D-ribosyl)glycinamide
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
(2S)-2-isopropyl-3-oxosuccinate
4-methyl-2-oxopentanoate
3-ethylmalate
2-oxovalerate
O-ureido-L-homoserine
canavaninosuccinate
L-arginino-succinate
H2
hydrogen peroxide
2-phosphoglycolate
imidazole acetol-phosphate
N-acetyl-L-glutamate 5-semialdehyde
histidinal
tetrahydrogeranylgeranyl diphosphate
dihydrogeranylgeranyl diphosphate
(2S)-2-isopropylmalate
(2R,3S)-3-isopropylmalate
2-isopropylmaleate
L-histidinol phosphate
histidinol
oxaloacetate
thiamine diphosphate
(2Z,4E)-2-hydroxyhexa-2,4-dienedioate
coproporphyrinogen III
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
thiamine phosphate
5-amino-6-(5-phospho-D-ribitylamino)uracil
5-amino-6-(5-phospho-D-ribosylamino)uracil
acetoacetate
β-nicotinate D-ribonucleotide
β-D-ribosylnicotinate
L-β-lysine
5-phospho-β-D-ribosylamine
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
3-dehydroshikimate
phosphoenolpyruvate
5-enolpyruvoyl-shikimate 3-phosphate
prephenate
3-deoxy-D-arabino-heptulosonate 7-phosphate
3-dehydroquinate
glycerone phosphate
orotidine 5'-phosphate
1-deoxy-L-glycero-tetrulose 4-phosphate
glycolate
O-acetyl-L-serine
H2O
nicotinate adenine dinucleotide
α-D-ribose 1,5-bisphosphate
shikimate
shikimate 3-phosphate
3-methyl-2-oxobutanoate
CO2
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
ammonia
enol-phenylpyruvate
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
1,2-dihydro-β-NADP
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
S-ribosyl-L-homocysteine
autoinducer 2
oxalate
(R)-mevalonate diphosphate
sulfoethylcysteine
2-(sulfomethyl)thiazolidine-4-carboxylate
5-methylcytosine
N-acetylglutamyl-phosphate
anthranilate
5-amino-6-(D-ribitylamino)uracil
N5-carboxyaminoimidazole ribonucleotide
7-carboxy-7-deazaguanine
7,8-didemethyl-8-hydroxy-5-deazariboflavin
coenzyme F390-A
N-(5-phosphoribosyl)-anthranilate
methanophenazine
dihydromethanophenazine
3-phosphooxypyruvate
(2S)-lactyl-2-diphospho-5'-guanosine
(R)-mevalonate
(R)-5-phosphomevalonate
5-(methylsulfanyl)-ribulose 1-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
carbon monoxide
(R)-1-amino-2-propanol O-2-phosphate
(S)-dihydroorotate
carboxyphosphate
carbonic acid
(R)-2,3-dihydroxy-3-methylpentanoate
preuroporphyrinogen
5-aminolevulinate
porphobilinogen
(S)-4-amino-5-oxopentanoate
isochorismate
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
S-adenosyl 3-(methylsulfanyl)propylamine
isopentenyl diphosphate
4-prenylphlorisobutyrophenone
prenyl diphosphate
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
L-canavanine
DNA with lesion
L-homocysteine
phenylacetate
N2
Mg-protoporphyrin
cobalt-precorrin-5B
cobalt-precorrin-6A
cobalt-precorrin-4
cobalt-precorrin-5A
cobalt-precorrin-3
adenosylcobalamin
adenosylcobinamide-GDP
adenosylcobalamin 5'-phosphate
cobalt-sirohydrochlorin
cobalt-precorrin-2
cob(II)yrinate c-monoamide
cob(II)yrinate a,c-diamide
cobyrinate
adenosyl-cob(III)yrinate a,c-diamide
adenosylcobyrate
cobalt-factor III
cobalt-precorrin-7
cobalt-precorrin-8
cobalt-precorrin-6B
protoporphyrin IX
protoporphyrinogen IX
uroporphyrinogen-I
uroporphyrinogen-III
siroheme
oxygen
2-iminosuccinate
2-chloroacetate
β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)
sn-glycerol 3-phosphate
sn-glycerol 1-phosphate
3-phospho-D-glyceroyl-phosphate
3-phospho-D-glycerate
2-phospho-D-glycerate
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
ω-saturated C55 dolichol phosphate
(2S)-2-phospholactate
(2R)-2,3-dihydroxy-3-methylbutanoate
(S)-citramalate
preQ0
5-chloro-5-deoxy-D-ribonate
5-chloro-4-hydroxy-2-oxopentanoate
H+
ammonium
K+
Mg2+
Co2+
Mo2+
Zn2+
Fe2+
hydrogencarbonate
sulfite
molybdate
nitrate
phosphate
diphosphate
triphosphate
chloride
(2E,6E)-farnesyl diphosphate
pristanate
glycerophosphoglycerol
glycerophosphoserine
sn-glycero-3-phosphoethanolamine
1-oleoyl-2-palmitoyl-phosphatidylglycerol
agmatine
cadaverine
dehydrospermidine
spermidine
putrescine
glycine betaine
tyramine
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
5-(2-hydroxyethyl)-4-methylthiazole
4-methyl-5-(2-phosphooxyethyl)thiazole
L-cysteate
3-sulfopyruvate
sulfoacetaldehyde
coenzyme M
phenylacetyl-CoA
α-linolenoyl-CoA
linoleoyl-CoA
3'-dephospho-CoA
succinyl-CoA
2-methylacetoacetyl-CoA
acetyl-CoA
isobutanoyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
phytenoyl-CoA
oleoyl-CoA
ω-carboxy-(9Z)-octadec-9-enoyl-CoA
7-hydroxylauroyl-CoA
18-hydroxystearoyl-CoA
16-hydroxypalmitoyl-CoA
18-hydroxyoleoyl-CoA
(Z)-15-tetracosenoyl-CoA
propanoyl-CoA
octanoyl-CoA
lauroyl-CoA
decanoyl-CoA
stearoyl-CoA
palmitoyl-CoA
pristanoyl-CoA
acetoacetyl-CoA
3-oxopentanoyl-CoA
methane
(25S)-3-oxocholest-4-en-26-oate
(25S)-3-oxocholest-4-en-26-oyl-CoA
nicotinate
riboflavin
tetrahydropteroyl tri-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
5,10-methenyltetrahydromethanopterin
5-formyl-tetrahydromethanopterin
5,10-methylene-tetrahydromethanopterin
N5-methyltetrahydromethanopterin
tetrahydromethanopterin
pyridoxamine 5'-phosphate
pyridoxine 5'-phosphate
pyridoxal 5'-phosphate
FMNH2
FMN
FAD
(R)-NADHX
(S)-NADHX
NADH
NADPH
NAD+
NADP+
caldariellaquinone
caldariellaquinol
adenylo-succinate
cyclic-AMP
dGDP
dIDP
dITP
IDP
ITP
dADP
hypoxanthine
1-(5-phospho-β-D-ribosyl)-AMP
GDP
dATP
dGTP
GTP
5'-deoxyadenosine
XMP
GMP
IMP
AMP
ATP
ADP
1-(5-phospho-β-D-ribosyl)-ATP
5-fluorocytosine
5-fluorouracil
(R)-NADPHX
(S)-NADPHX
P1,P4-bis(5'-adenosyl) tetraphosphate
xanthosine
guanosine
inosine
adenosine
uridine
cytidine
2'-deoxycytidine
2'-deoxyuridine
thymidine
dUTP
dCTP
dTTP
UTP
CTP
dUMP
dCMP
dTMP
CMP
UMP
dTDP
dUDP
dCDP
UDP
CDP
β-nicotinamide D-ribonucleotide
GDP-α-D-mannose
GDP-α-D-mannuronate
cytosine
uracil
thymine
adenine
UDP-α-D-glucose
dTDP-α-D-glucose
UDP-α-D-galactose
UDP-α-D-glucuronate
dTDP-β-L-rhamnose
dTDP-4-dehydro-β-L-rhamnose
methyl-CoM
coenzyme A
oxidized coenzyme F420-0
oxidized coenzyme F420-2
MoO2-molybdopterin cofactor
guanylyl molybdenum cofactor
precorrin-8x
precorrin-2
precorrin-7
precorrin-6B
precorrin-6A
precorrin-5
precorrin-4
precorrin-3B
precorrin-3A
precorrin-1
sirohydrochlorin
6,7-dimethyl-8-(1-D-ribityl)lumazine
reduced riboflavin
7,8-dihydroneopterin 3'-triphosphate
6-carboxy-5,6,7,8-tetrahydropterin
(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin
orotate
4-hydroxybenzoate
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
diacetyl
acetone
methylglyoxal
acetaldehyde
formaldehyde
D-glyceraldehyde
methanol
ethanol
glycerol
myo-inositol
1D-myo-inositol 1-monophosphate
1D-myo-inositol 3-monophosphate
1-(β-D ribofuranosyl)nicotinamide
maltotriose
maltotetraose
maltoheptaose
maltohexaose
maltopentaose
keto-D-fructose
β-D-fructofuranose
D-ribulose-1,5-bisphosphate
α-D-glucopyranose 1-phosphate
D-glyceraldehyde 3-phosphate
5-phospho-α-D-ribose 1-diphosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
β-D-fructose 1,6-bisphosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
D-ribulose 5-phosphate
2-deoxy-α-D-ribose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
18-hydroxystearate
16-hydroxypalmitate
18-hydroxyoleate
saturated CDP-archaeol
unsaturated CDP-archaeol
2,3-bis-O-phytanyl-sn-glycerol 1-phosphate
2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate
saturated archaetidylserine
saturated archaetidylethanolamine
unsaturated archaetidylserine
unsaturated archaetidylethanolamine
phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)
geranyl diphosphate
phytyl diphosphate
geranylgeranyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
phlorisovalerophenone
deoxyhumulone
deoxycohumulone
4-prenylphlorisovalerophenone
phosphoribulosylformimino-AICAR-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
5-amino-4-imidazolecarboxyamide
(3E)-2-oxohex-3-enedioate
chorismate
L-aspartate
succinate
fumarate
(S)-malate
α,ω-9Z-octadecenedioate
cis-homoaconitate
(2R)-homocitrate
3-phenyl-2-oxopropanoate
3-(4-hydroxyphenyl)pyruvate
2-oxobutanoate
pyruvate
2-oxoglutarate
formate
acetate
(R)-lactate
(S)-lactate
octanoate
7-hydroxylaurate
laurate
decanoate
(15Z)-tetracosenoate
oleate
α-linolenate
linoleate
stearate
palmitate
phytenate
(R)-pantoate
carbamate
L-serine
L-threonine
glycine
L-glutamine
L-cysteine
L-tyrosine
L-histidine
L-arginine
L-lysine
L-glutamate
L-valine
L-alanine
L-leucine
L-phenylalanine
L-isoleucine
L-methionine
L-tryptophan
β-alanine
(R)-β-lysine
D-alanine
L-aspartyl-4-phosphate
L,L-diaminopimelate
L-ornithine
N-carbamoyl-L-aspartate
N-acetyl-L-ornithine
N-acetyl-L-citrulline
L-threonine 3-O-phosphate
3-phospho-L-serine
N-acetyl-L-glutamate
L-citrulline
L-homoserine
L-aspartate 4-semialdehyde
O-phospho-L-homoserine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
L-canaline
meso-diaminopimelate
D-alanyl-D-alanine