an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
nicotinate adenine dinucleotide
glycerone phosphate
S-methyl-5-thio-α-D-ribose 1-phosphate
5-(methylsulfanyl)-ribulose 1-phosphate
urea
2-(α-hydroxyethyl)thiamine diphosphate
1-deoxy-L-glycero-tetrulose 4-phosphate
oxalosuccinate
(S)-dihydroorotate
hydrogen selenide
O-acetyl-L-serine
citrate
orotidine 5'-phosphate
2-methyl-1,4-benzoquinone
methyl-1,4-benzoquinol
4-amino-4-deoxychorismate
hydroxypyruvate
L-tartrate
S-adenosyl 3-(methylsulfanyl)propylamine
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one
isopentenyl diphosphate
5-amino-6-(5-phospho-D-ribitylamino)uracil
pseudouridine 5'-phosphate
β-nicotinate D-ribonucleotide
4-fumaryl-acetoacetate
acetoacetate
methylamine
dihydrolipoamide
hydrogen peroxide
lipoamide
L-canavanine
D-erythro-imidazole-glycerol-phosphate
histidinol
O-ureido-L-homoserine
canavaninosuccinate
histidinal
L-arginino-succinate
ammonia
carbamoyl phosphate
imidazole acetol-phosphate
L-histidinol phosphate
3-hydroxypropanoate
2-phosphoglycolate
3'-phosphoadenylyl-sulfate
prenyl diphosphate
coproporphyrinogen III
3-phosphooxypyruvate
porphobilinogen
(S)-4-amino-5-oxopentanoate
5-aminolevulinate
(R)-4-phosphopantoate
oxaloacetate
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
enol-phenylpyruvate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
phosphoenolpyruvate
myosin light-chain phosphate
a [myosin light-chain] L-serine
(R)-4'-phosphopantothenate
5-amino-6-(D-ribitylamino)uracil
(R)-4'-phosphopantothenoyl-L-cysteine
4'-phosphopantetheine
adenosine 5'-phosphoselenate
adenosine 5'-phosphosulfate
3-methyl-2-oxobutanoate
2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA
cyclohexane-1-carbonyl-CoA
cyclohexane-1-carboxylate
3-oxopimeloyl-CoA
3-hydroxypimeloyl-CoA
6-oxocyclohex-1-ene-1-carbonyl-CoA
6-hydroxycyclohex-1-ene-1-carbonyl-CoA
cyclohex-1,5-diene-1-carbonyl-CoA
crotonate
2-dehydropantoate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
thiamine phosphate
(R)-mevalonate
thiamine diphosphate
glycolate
2-dehydro-3-deoxy-D-gluconate
hexulose 6-phosphate
(R)-mevalonate diphosphate
quinolinate
H2
H2O
muconolactone
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
cis,cis-muconate
(lipoyl)adenylate
(indol-3-yl)pyruvate
(indol-3 yl)acetyl-CoA
CO2
N-succinyl-L,L-2,6-diaminopimelate
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
preuroporphyrinogen
S-ribosyl-L-homocysteine
autoinducer 2
4-prenylphlorisobutyrophenone
4-aminobutanoate
succinate semialdehyde
3-oxopropanoate
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
(R)-5-phosphomevalonate
S-methyl-5'-thioadenosine
(25S)-3-oxocholest-4-en-26-oate
(25S)-3-oxocholest-4-en-26-oyl-CoA
2-iminosuccinate
2-iminobutanoate
2-octaprenylphenol
N-acetyl-L-glutaminyl-L-glutamine
N-acetyl-L-glutaminyl-L-glutamine amide
myo-inositol
1D-myo-inositol 3-monophosphate
(3S)-linalool
(3R)-linalool
(2E,6E)-farnesyl diphosphate
pristanate
agmatine
dehydrospermidine
putrescine
spermidine
spermine
2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
(2Z)-2-aminobut-2-enoate
protoporphyrinogen IX
uroporphyrinogen-I
uroporphyrinogen-III
siroheme
protoheme
Fe3+
Na+
ammonium
H+
Co2+
Mn2+
Zn2+
Fe2+
sulfite
thiosulfate
molybdate
hydrogencarbonate
nitrate
sulfate
OH-
hydrogensulfite
selenate
tungstate
phosphate
triphosphate
diphosphate
chloride
trimethyl sulfonium
hydroxyl radical
hydrogen sulfide
oxygen
(R)-lipoate
coenzyme A
tetrahydropteroyl tri-L-glutamate
5,6,7,8-tetrahydrofolate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylene-tetrahydromethanopterin
tetrahydromethanopterin
nicotinate
riboflavin
pyridoxal 5'-phosphate
4-aminobenzoate
menaquinol-8
demethylmenaquinol-8
L-serine
L-threonine
L-glutamine
L-cysteine
glycine
L-asparagine
L-tyrosine
L-histidine
L-arginine
L-aspartate
L-glutamate
β-alanine
L-leucine
L-proline
L-alanine
O-acetyl-L-homoserine
N-carbamoyl-L-aspartate
sarcosine
3-phospho-L-serine
L-phenylalanine
L-citrulline
S-sulfo-L-cysteine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
L-homocysteine
L-homoserine
L-aspartate 4-semialdehyde
L-ornithine
L-glutamate-5-semialdehyde
O-phospho-L-homoserine
O-succinyl-L-homoserine
L-selenocysteine
L-methionine
L-cystathionine
L,L-diaminopimelate
2-chloroacetate
β-D-glucopyranose
α-D-glucopyranose
D-glyceraldehyde
acetaldehyde
formaldehyde
(S)-lactaldehyde
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
sn-glycerol 1-phosphate
3-phospho-D-glyceroyl-phosphate
(R)-glycerate
3-phospho-D-glycerate
2-phospho-D-glycerate
dimethyl sulfide
methanethiol
4-methyl-5-(2-phosphooxyethyl)thiazole
L-cysteate
3-sulfopyruvate
FMN
FAD
(S)-NADHX
(R)-NADHX
NADH
NADPH
NADP+
NAD+
D-glucono-1,5-lactone
2-methylacetoacetyl-CoA
succinyl-CoA
vinylacetyl-CoA
4-hydroxybutanoyl-CoA
3-hydroxypropanoyl-CoA
3'-dephospho-CoA
acryloyl-CoA
dihomo γ-linolenoyl-CoA
glutaryl-CoA
(E)-glutaconyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
2-methylfumaryl-CoA
3-methylfumaryl-CoA
(2R,3S)-β-methylmalyl-CoA
acetyl-CoA
isobutanoyl-CoA
linoleoyl-CoA
malonyl-CoA
α-linolenoyl-CoA
(3S)-citramalyl-CoA
(R)-methylmalonyl-CoA
(S)-methylmalonyl-CoA
crotonyl-CoA
phytenoyl-CoA
oleoyl-CoA
(Z)-15-tetracosenoyl-CoA
cerotoyl-CoA
2-carboxy-cerotoyl-CoA
lauroyl-CoA
decanoyl-CoA
octanoyl-CoA
propanoyl-CoA
pristanoyl-CoA
stearoyl-CoA
icosanoyl-CoA
myristoyl-CoA
palmitoyl-CoA
(3R)-3-hydroxybutanoyl-CoA
(S)-3-hydroxybutanoyl-CoA
acetoacetyl-CoA
3-oxopentanoyl-CoA
unsaturated CDP-archaeol
saturated CDP-archaeol
2,3-bis-O-phytanyl-sn-glycerol 1-phosphate
2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate
geranyl diphosphate
di-trans,octa-cis-undecaprenyl phosphate
geranylgeranyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
3-octaprenyl-4-hydroxybenzoate
phlorisovalerophenone
deoxyhumulone
deoxycohumulone
4-prenylphlorisovalerophenone
chorismate
fumarate
succinate
(S)-malate
orotate
acetate
D-gluconate
(R)-pantoate
(S)-1-pyrroline-5-carboxylate
4-hydroxybutanoate
(15Z)-tetracosenoate
laurate
decanoate
octanoate
oleate
di-homo-γ-linolenate
linoleate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate
α-linolenate
phytenate
stearate
arachidate
myristate
palmitate
pyruvate
2-oxoglutarate
2-oxobutanoate
glyoxylate
3-phenyl-2-oxopropanoate
cis-aconitate
D-threo-isocitrate
formate
maltotriose
maltotetraose
sucrose
β-D-fructofuranose
N-acetyl-β-D-glucosamine
D-ribulose-1,5-bisphosphate
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
dTDP-α-D-glucose
ADP ribose 1'',2''-cyclic phosphate
ADP ribose 1''-phosphate
ADP-D-ribose
UDP-α-D-glucose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
sucrose 6F-phosphate
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
5-phospho-α-D-ribose 1-diphosphate
D-ribulose 5-phosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
β-D-fructose 1,6-bisphosphate
L-fuculose 1-phosphate
β-D-glucopyranose 1-phosphate
α-D-mannose 1-phosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
α-D-mannopyranose 6-phosphate
β-D-mannopyranose 6-phosphate
5,10-methenyltetrahydrofolate mono-L-glutamate
(S)-3-hydroxy-isobutanoate
IMP
XMP
adenylo-succinate
GMP
5'-deoxyadenosine
1-(5-phospho-β-D-ribosyl)-ATP
1-(5-phospho-β-D-ribosyl)-AMP
AMP
dGDP
dGTP
ITP
8-oxo-GTP
8-oxo-dGTP
isoguanine
IDP
dADP
dATP
ADP
GTP
GDP
dAMP
dGMP
2'-deoxyadenosine
2'-deoxyguanosine
ATP
2-hydroxy-dATP
5-hydroxy-CTP
UDP
CDP
UMP
CMP
UTP
CTP
β-nicotinamide D-ribonucleotide
dCDP
dUDP
dTDP
dCTP
dUTP
dTTP
dCMP
dTMP
dUMP
thymidine
2'-deoxyuridine
2'-deoxycytidine
cytidine
uridine
adenosine
adenine
uracil
thymine
cytosine
7,8-dihydroneopterin 3'-triphosphate
(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin
6,7-dimethyl-8-(1-D-ribityl)lumazine
cob(I)alamin
adenosylcobalamin
precorrin-1
precorrin-2
sirohydrochlorin
(S)-methylmalonate-semialdehyde
(R)-methylmalonate-semialdehyde