an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
3-ureidopropanoate
coproporphyrinogen III
1-deoxy-L-glycero-tetrulose 4-phosphate
3-dehydroquinate
3-dehydroshikimate
2-phosphoglycolate
glycolate
α-D-glucosamine 1-phosphate
5-(methylsulfanyl)-ribulose 1-phosphate
(R)-1-amino-2-propanol O-2-phosphate
(R)-1-aminopropan-2-ol
α-ribazole
α-ribazole 5'-phosphate
thiamine diphosphate
5-oxo-L-proline
β-D-ribosylnicotinate
L-histidinol phosphate
4'-phosphopantetheine
(R)-4'-phosphopantothenoyl-L-cysteine
(R)-4'-phosphopantothenate
(R)-pantothenate
histidinal
histidinol
oxalosuccinate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
5-phospho-β-D-ribosylamine
γ-L-glutamyl 5-phosphate
glutathione disulfide
adenosine 5'-phosphosulfate
adenosine 5'-phosphoselenate
(indol-3-yl)pyruvate
(indol-3 yl)acetyl-CoA
(R)-2,3-dihydroxy-3-methylpentanoate
(S)-2-aceto-2-hydroxybutanoate
5-deoxy-α-ribose 1-phosphate
S-methyl-5'-thioadenosine
S-methyl-5-thio-α-D-ribose 1-phosphate
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
thiamine phosphate
O-ureido-L-homoserine
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
prephenate
shikimate
shikimate 3-phosphate
CDP-glycerol
5-amino-6-(D-ribitylamino)uracil
carbon monoxide
carbamoyl phosphate
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
pseudouridine 5'-phosphate
orotidine 5'-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
(S)-2,3,4,5-tetrahydrodipicolinate
(S)-2-acetolactate
canavaninosuccinate
L-canavanine
L-arginino-succinate
glycerone phosphate
H2
hydrogenobyrinate
hydrogenobyrinate a,c-diamide
L-β-lysine
(S)-4-amino-5-oxopentanoate
5-aminolevulinate
porphobilinogen
preuroporphyrinogen
5-carboxymethyl-2-hydroxymuconate
5-amino-6-(5-phospho-D-ribitylamino)uracil
5-amino-6-(5-phospho-D-ribosylamino)uracil
N-(5-phosphoribosyl)-anthranilate
anthranilate
3-phosphooxypyruvate
(R)-mevalonate
(R)-5-phosphomevalonate
isopentenyl diphosphate
prenyl diphosphate
D-erythro-imidazole-glycerol-phosphate
imidazole acetol-phosphate
N-acetyl-L-glutamate 5-semialdehyde
N-acetylglutamyl-phosphate
citrate
(S)-3-methyl-2-oxopentanoate
urea
hexulose 6-phosphate
N1-(5-phospho-β-D-ribosyl)glycinamide
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
nicotinate adenine dinucleotide
3-methyl-2-oxobutanoate
coenzyme B
methanophenazine
CoB-CoM heterodisulfide
dihydromethanophenazine
(2S)-2-isopropylmalate
2-isopropylmaleate
(2R,3S)-3-isopropylmalate
(2S)-2-isopropyl-3-oxosuccinate
4-methyl-2-oxopentanoate
3-ethylmalate
2-oxovalerate
propionamide
(indol-3-yl)acetamide
acrylamide
acrylate
4-guanidinobutyramide
4-guanidinobutanoate
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
oxaloacetate
β-nicotinate D-ribonucleotide
quinolinate
phosphoenolpyruvate
hydrogen peroxide
H2O
CO2
2-carboxy-L-threo-pentonate
2-carboxy-L-xylonolactone
2,3-dioxo-L-gulonate
cyclic- 3,4-O-oxalyl-L-threonate
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
bisorganyltrisulfane
dehydroascorbate (bicyclic form)
cyclic-2,3-O-oxalyl-L-threonate
enol-phenylpyruvate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
ammonia
L-dehydro-ascorbate
4-(β-D-ribofuranosyl)-N-succinylaminobenzene 5'-phosphate
4-(β-D-ribofuranosyl)hydroxybenzene 5'-phosphate
α-D-galacturonate 1-phosphate
L-xylo-hex-3-ulono-1,4-lactone
L-gulono-1,4-lactone
2-(α-hydroxyethyl)thiamine diphosphate
2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one
sulfoethylcysteine
2-(sulfomethyl)thiazolidine-4-carboxylate
(2R,3S)-3-methylmalate
citraconate
4-amino-2-methyl-5-pyrimidinemethanol
dialurate
enolaldehyde
acetyl phosphate
(R)-mevalonate diphosphate
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-5-[1-α -D- ribofuranosyl 5-phosphate]-D-ribitol
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-5-[1-α -D- ribofuranosyl triphosphate]-D-ribitol
S-ribosyl-L-homocysteine
autoinducer 2
31-O-desmethylFK-506
FK-506
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
N2-succinyl-L-glutamate 5-semialdehyde
4-acetamidobutanal
4-acetamidobutanoate
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate
4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine
(L-threonylcarbamoyl)adenylate
5,6-dimethylbenzimidazole
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
N2-succinylglutamate
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
(S)-dihydroorotate
isopentenyl phosphate
oxalate
coenzyme F390-A
7,8-didemethyl-8-hydroxy-5-deazariboflavin
(2S)-lactyl-2-diphospho-5'-guanosine
DNA without lesion
(2E,6E)-farnesyl diphosphate
2-iminosuccinate
DNA with lesion
phenylacetate
adenosylcobalamin
cobalt-precorrin-5B
cobalt-precorrin-6A
adenosylcobinamide
adenosylcobalamin 5'-phosphate
adenosyl-cobinamide phosphate
adenosylcobinamide-GDP
Mg-protoporphyrin
cob(II)yrinate a,c-diamide
cobalt-precorrin-2
cobalt-precorrin-3
cobalt-sirohydrochlorin
cobalt-factor III
adenosyl-cob(III)yrinate a,c-diamide
adenosylcobyrate
cobalt-precorrin-7
cobalt-precorrin-8
cobalt-precorrin-6B
cobalt-precorrin-4
cob(I)yrinate a,c-diamide
cob(II)yrinate c-monoamide
cobyrinate
cobalt-precorrin-5A
N2
hydrogen cyanide
protoporphyrinogen IX
uroporphyrinogen-III
protoporphyrin IX
uroporphyrinogen-I
coproporphyrinogen I
siroheme
S0
hydrogen sulfide
oxygen
2-chloroacetate
sn-glycerol 3-phosphate
sn-glycerol 1-phosphate
2-O-(α-D-mannosyl)-3-phospho-D-glycerate
2-O-(α-D-mannosyl)-D-glycerate
3-phospho-D-glyceroyl-phosphate
2,3-diphospho-D-glycerate
3-phospho-D-glycerate
2-phospho-D-glycerate
(2S)-2-phospholactate
(2R)-2,3-dihydroxy-3-methylbutanoate
(R)-citramalate
5,10-methenyltetrahydrofolate mono-L-glutamate
3-(all-trans-octaprenyl)benzene-1,2-diol
2-octaprenylphenol
(S)-2-hydroxyglutarate
monodehydroascorbate radical
S-(hydroxymethyl)glutathione
dimethyl sulfide
glutathione
thiocyanate
methanethiol
S-sulfanylglutathione
5-(2-hydroxyethyl)-4-methylthiazole
4-methyl-5-(2-phosphooxyethyl)thiazole
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
L-cysteate
3-sulfopyruvate
sulfoacetaldehyde
coenzyme M
trimethyl sulfonium
sulfate
sulfite
selenite
selenate
thiosulfate
nitrate
hydrogensulfite
hydrogencarbonate
molybdate
chloride
phosphate
diphosphate
triphosphate
Fe3+
ammonium
H+
Mo2+
Fe2+
Co2+
Mg2+
Cu2+
glycine betaine
agmatine
putrescine
dehydrospermidine
spermidine
2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
acetamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
methane
(indol-3-yl)acetate
succinyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
phenylacetyl-CoA
isobutanoyl-CoA
acetyl-CoA
3'-dephospho-CoA
4-hydroxybenzoyl-CoA
propanoyl-CoA
acetoacetyl-CoA
L-galactono-1,4-lactone
FMN
FAD
FMNH2
(S)-NADHX
(R)-NADHX
NADPH
NADH
NADP+
NAD+
caldariellaquinol
caldariellaquinone
N,N-dimethylglycine
L-homocysteine
methyl-CoM
coenzyme A
tetrahydrosarcinapterin
5-methyl-tetrahydrosarcinapterin
guanylyl molybdenum cofactor
MoO2-molybdopterin cofactor
oxidized coenzyme F420-2
oxidized coenzyme F420-0
5,10-methenyltetrahydromethanopterin
N5-methyltetrahydromethanopterin
tetrahydromethanopterin
5-formyl-tetrahydromethanopterin
demethylated 7,8-dihydromethanopterin
7,8-dihydromethanopterin
5,10-methylene-tetrahydromethanopterin
5,6,7,8-tetrahydrofolate
tetrahydropteroyl tri-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
7,8-dihydrofolate monoglutamate
riboflavin
L-ascorbate
nicotinate
menadione
(S)-1-pyrroline-5-carboxylate
precorrin-1
precorrin-2
precorrin-3B
precorrin-4
precorrin-5
precorrin-7
precorrin-8x
precorrin-6B
precorrin-6A
precorrin-3A
sirohydrochlorin
hydantoin
6,7-dimethyl-8-(1-D-ribityl)lumazine
reduced riboflavin
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydroneopterin 2',3'-cyclic phosphate
(7,8-dihydropterin-6-yl)methyl diphosphate
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin
7,8-dihydroneopterin 2'-phosphate
7,8-dihydroneopterin 3'-phosphate
7,8-dihydroneopterin
6-(hydroxymethyl)-7,8-dihydropterin
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-D-ribitol 5'-phosphate
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-(4-aminophenyl)-1-deoxy-D-ribitol
7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate
7,8-dihydropteroate
adenine
2'-deoxyadenosine
2'-deoxyguanosine
xanthosine
adenosine
inosine
guanosine
dAMP
dGMP
dITP
dGTP
dATP
dIDP
dGDP
dADP
IDP
GDP
ADP
IMP
XMP
GMP
AMP
ITP
GTP
ATP
5,6-dihydrouracil
5,6-dihydrothymine
uridine 3'-monophosphate
cytidine-3'-monophosphate
orotate
dUMP
dUDP
dUTP
dTTP
dCTP
uracil
dCMP
dCDP
UDP
UTP
dTMP
dTDP
CTP
CDP
UDP-α-D-galactose
UDP-α-D-glucose
UDP-α-D-glucuronate
UDP-α-D-galacturonate
UDP-N-acetyl-α-D-glucosamine
cytidine
uridine
thymidine
2'-deoxycytidine
2'-deoxyuridine
thymine
CMP
UMP
(indole-3-yl)acetonitrile
salicylaldehyde
4-hydroxybenzoate
benzaldehyde
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
menadiol
salicylate
4-aminobenzoate
benzoate
L-α-amino-ε-keto-pimelate
L-serine
β-alanine
L-proline
L-alanine
L-glutamine
L-leucine
glycine
L-glutamate
L-histidine
L-arginine
L-lysine
L-aspartate
L-threonine
L-tyrosine
L-cysteine
L-tryptophan
L-phenylalanine
D-alanine
L-aspartyl-4-phosphate
sarcosine
N-carbamoylglycine
N-acetyl-L-aspartate
N-acetyl-L-ornithine
N-acetyl-L-methionine
N-acetyl-L-glutamate
N-carbamoyl-L-aspartate
O-acetyl-L-homoserine
L-threonine 3-O-phosphate
3-phospho-L-serine
L-citrulline
L-valine
L-isoleucine
L-homoserine
L-glutamate-5-semialdehyde
L-aspartate 4-semialdehyde
L-ornithine
O-phospho-L-homoserine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
meso-diaminopimelate
L-methionine
L,L-diaminopimelate
chorismate
succinate
fumarate
(S)-malate
3-(carbamoylamino)-2-methylpropanoate
(3E,5R)-5-carboxy-2-oxohept-3-enedioate
cis-aconitate
D-threo-isocitrate
(R)-lactate
(S)-lactate
pyruvate
acetate
formate
propanoate
octanoate
apo-4'-lycopenoate
(R)-pantoate
aldehydo-D-glucuronate
aldehydo-D-galacturonate
3-(4-hydroxyphenyl)pyruvate
3-phenyl-2-oxopropanoate
2-oxobutanoate
2-oxoglutarate
methylglyoxal
diacetyl
(R)-acetoin
glycolaldehyde
hydroxypyruvaldehyde phosphate
formaldehyde
acetaldehyde
1-octanal
(S)-lactaldehyde
(R)-lactaldehyde
D-glyceraldehyde
α-D-glucopyranose
β-D-glucopyranose
methanol
ethanol
(3R)-linalool
(3S)-linalool
myo-inositol
1D-myo-inositol 2-monophosphate
1D-myo-inositol 1-monophosphate
1D-myo-inositol 6-monophosphate
1D-myo-inositol 5-monophosphate
1D-myo-inositol 4-monophosphate
1D-myo-inositol 3-monophosphate
saturated CDP-archaeol
unsaturated CDP-archaeol
2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate
2,3-bis-O-phytanyl-sn-glycerol 1-phosphate
geranyl diphosphate
geranylgeranyl diphosphate
all-trans-octaprenyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
apo-4'-lycopenal
phytyl diphosphate
3-octaprenyl-4-hydroxybenzoate
1-(β-D ribofuranosyl)nicotinamide
maltotriose
maltotetraose
maltopentaose
maltohexaose
sucrose
keto-D-fructose
N-acetyl-α-D-glucosamine 1-phosphate
β-D-fructofuranose
D-ribulose-1,5-bisphosphate
sucrose 6F-phosphate
GDP-α-D-mannose
GDP-4-dehydro-α-D-rhamnose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
5-phospho-α-D-ribose 1-diphosphate
D-erythrose 4-phosphate
β-D-fructose 1,6-bisphosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
6-deoxy-5-ketofructose 1-phosphate
α-D-mannopyranose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
D-ribulose 5-phosphate
2-deoxy-α-D-ribose 1-phosphate
α-D-galactose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
aldehydo-L-galactonate
L-gulonate
adenosine 3'-monophosphate
guanosine 3'-monophosphate
5'-deoxyadenosine
adenylo-succinate
1-(5-phospho-β-D-ribosyl)-ATP
1-(5-phospho-β-D-ribosyl)-AMP
cyclic-AMP
β-nicotinamide D-ribonucleotide