an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
5-dehydro-4-deoxy-D-glucarate
2-dehydro-3-deoxy-D-gluconate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
3-deoxy-D-glycero-2,5-hexodiulosonate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
4-methyl-3-oxoadipate-enol-lactone
4-methyl-3-oxoadipate
O-phosphoethanolamine
phosphocholine
glutathione disulfide
(L-threonylcarbamoyl)adenylate
N2-succinyl-L-glutamate 5-semialdehyde
N2-succinylglutamate
4-acetamidobutanal
4-acetamidobutanoate
MLPS
core oligosaccharide-lipid A (E. coli K-12 core type)
ethanolamine
DNA without lesion
acrylamide
acrylate
4-guanidinobutyramide
4-guanidinobutanoate
(indol-3-yl)acetamide
propionamide
prephytoene diphosphate
methylsalicylate
α-D-glucosamine 1-phosphate
(lipoyl)adenylate
α-D-galactosyl-diphosphoundecaprenol
1-phosphatidyl-myo-inositol
1-phosphatidyl-myo-inositol 2-mannose
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
prephenate
3-deoxy-D-arabino-heptulosonate 7-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
salicyl alcohol
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate
cis-coumarinic acid-β-D-glucoside
scopolin
4-hydroxybenzaldehyde
4-methylumbelliferyl glucoside
thiamine diphosphate
urea
hydrogen peroxide
4'-phosphopantetheine
2-C-methyl-D-erythritol-2,4-cyclodiphosphate
β-D-ribosylnicotinate
xanthine
quinolinate
3-methyl-2-oxobutanoate
2-deoxygluconate
3-dehydro-2-deoxy-D-gluconate
(R)-pantothenate
(R)-4'-phosphopantothenate
coproporphyrinogen III
tartronate semialdehyde
acetyl phosphate
3-dehydroquinate
3-dehydroshikimate
shikimate
shikimate 3-phosphate
prenyl diphosphate
(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate
butanoyl phosphate
β-nicotinate D-ribonucleotide
nicotinate adenine dinucleotide
hydrogen selenide
O-acetyl-L-serine
N-Formyl-L-kynurenine
6-phospho D-glucono-1,5-lactone
enol-phenylpyruvate
S-methyl-5'-thioadenosine
5-(methylsulfanyl)-α-D-ribose
2-C-methyl-D-erythritol 4-phosphate
isopentenyl diphosphate
glycerone phosphate
D-gluconate 6-phosphate
CO2
phosphoenolpyruvate
H2O
2-carboxy-L-threo-pentonate
2-carboxy-L-xylonolactone
2,3-dioxo-L-gulonate
cyclic- 3,4-O-oxalyl-L-threonate
dehydroascorbate (bicyclic form)
cyclic-2,3-O-oxalyl-L-threonate
ammonia
L-dehydro-ascorbate
α-D-galacturonate 1-phosphate
L-xylo-hex-3-ulono-1,4-lactone
L-gulono-1,4-lactone
2-amino-3-carboxymuconate-6-semialdehyde
N-acetyl-L-glutamate 5-semialdehyde
N-acetylglutamyl-phosphate
(R)-4'-phosphopantothenoyl-L-cysteine
anthranilate
N-(5-phosphoribosyl)-anthranilate
2-iminoacetate
hypotaurine
4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine 4-sulfate
2-phosphoglycolate
propanoyl phosphate
4-pyridoxolactone
glycolate
1,6-anhydro-N-acetyl-β-muramate
N-acetyl-D-muramate 6-phosphate
nigerose
N-acetyl-D-galactosamine 6-phosphate
D-galactosamine-6-phosphate
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
L-alanyl-γ-D-glutamyl-meso-diaminopimelate
L-homocysteine
4-methylphenol
DNA with lesion
cob(I)alamin
adenosylcobalamin
cob(I)yrinate a,c-diamide
adenosyl-cob(III)yrinate a,c-diamide
cob(I)inamide
adenosylcobinamide
protoheme
hydrogen cyanide
protoporphyrinogen IX
protoporphyrin IX
uroporphyrinogen-III
oxygen
hydrogen sulfide
sn-glycerol 3-phosphate
2,3-diphospho-D-glycerate
(R)-glycerate
3-phospho-D-glyceroyl-phosphate
2-phospho-D-glycerate
3-phospho-D-glycerate
α-D-glucosamine 6-phosphate
N-acetyl-D-mannosamine 6-phosphate
1-oleoyl-2-lyso-glycerone phosphate
5,10-methenyltetrahydrofolate mono-L-glutamate
superoxide
nitric oxide
monodehydroascorbate radical
dimethyl sulfide
glutathione
2-sulfinoacetaldehyde
N-acetyl-D-galactosamine 6-O-sulfate
(R)-S-lactoylglutathione
H+
ammonium
K+
Cd2+
Cu2+
Mn2+
Pb2+
Hg2+
Co2+
Zn2+
Fe2+
trimethyl sulfonium
hydrogencarbonate
thiosulfate
sulfate
hydrogensulfite
sulfite
phosphate
triphosphate
diphosphate
agmatine
N1-acetylspermidine
N-acetylputrescine
N1-acetylspermine
spermidine
spermine
cadaverine
putrescine
choline
glycine betaine
glycerophosphoglycerol
glycerophosphoserine
sn-glycero-3-phosphoethanolamine
sn-glycero-3-phosphocholine
1-oleoyl-2-palmitoyl-phosphatidylglycerol
5'-deoxy-5'-fluoroadenosine
5-fluoro-5-deoxy-D-ribose 1-phosphate
fluoroacetaldehyde
fluoroacetate
5'-chloro-5'-deoxyadenosine
5-chloro-5-deoxyribose 1-phosphate
acetamide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
5-amino-4-imidazolecarboxyamide
nicotinamide
methyl (indol-3-yl)acetate
(indol-3-yl)acetate
4-hydroxybutanoyl-CoA
2-methylacetoacetyl-CoA
malonyl-CoA
3'-dephospho-CoA
succinyl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
isobutanoyl-CoA
CoA-disulfide
acetyl-CoA
crotonyl-CoA
oleoyl-CoA
propanoyl-CoA
butanoyl-CoA
hexadecanedioyl-CoA
acetoacetyl-CoA
3-oxopentanoyl-CoA
all-trans-retinyl palmitate
L-galactono-1,4-lactone
FMNH2
FMN
FADH2
FAD
(S)-NADHX
(R)-NADHX
NADH
NADPH
NADP+
NAD+
ubiquinol-9
3-demethylubiquinol-9
(R)-lipoate
coenzyme A
7,8-dihydrofolate monoglutamate
5,6,7,8-tetrahydrofolate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
riboflavin
thiamine
nicotinate
L-ascorbate
pyridoxal
all-trans-retinol
(S)-1-pyrroline-5-carboxylate
reduced riboflavin
guanine
adenine
2'-deoxyinosine
2'-deoxyguanosine
2'-deoxyadenosine
xanthosine
guanosine
inosine
adenosine
hypoxanthine
dGTP
dATP
dGDP
dADP
GDP
ADP
GMP
IMP
XMP
AMP
GTP
ATP
dCMP
dTDP
dTMP
dUMP
uracil
dUTP
dCTP
UTP
CTP
dUDP
UDP
dCDP
CDP
CDP-choline
dTTP
UDP-N-acetyl-α-D-mannosamine
UDP-α-D-galactose
UDP-α-D-glucose
UDP-α-D-galacturonate
UDP-N-acetyl-α-D-muramate
UDP-α-D-glucuronate
UDP-N-acetyl-α-D-mannosaminuronate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-glucosamine
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
uridine
cytidine
2'-deoxycytidine
2'-deoxyuridine
thymidine
thymine
CMP
UMP
preQ1
scopoletin
coumarin
4-methylumbelliferone
neolinustatin
lotaustralin
linustatin
linamarin
taxiphyllin
preQ0
2-hydroxy-2-methylpropanenitrile
(2R)-2-hydroxy-2-methylbutanenitrile
salicyl-6-hydroxy-2-cyclohexene-on-oyl
6-hydroxy-2-cyclohexen-one-carboxylate
salicylaldehyde
urate
benzaldehyde
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
hydroquinone
coumarinate
salicylate
benzoate
chorismate
(4S)-4-hydroxy-2-oxoglutarate
fumarate
L-aspartate
(S)-malate
D-galactarate
4-hydroxybutanoate
(S)-lactate
(R)-lactate
propanoate
acetate
formate
pyruvate
butanoate
octanoate
3-oxoadipate
leukotriene-D4
leukotriene-E4
oleate
apo-4'-lycopenoate
palmitate
D-mannonate
D-tagaturonate
aldehydo-D-galacturonate
aldehydo-D-glucuronate
3-(4-hydroxyphenyl)pyruvate
3-phenyl-2-oxopropanoate
glyoxylate
4-(methylsulfanyl)-2-oxobutanoate
2-oxoglutarate
L-kynurenine
L-serine
L-leucine
glycine
L-alanine
L-glutamine
L-proline
L-glutamate
L-histidine
Nω-hydroxy-L-arginine
L-arginine
L-lysine
L-threonine
L-tyrosine
L-asparagine
L-cysteine
L-phenylalanine
L-tryptophan
D-alanine
N-acetyl-L-citrulline
N-acetyl-L-ornithine
N-acetyl-L-glutamate
L-citrulline
L-ornithine
S-sulfo-L-cysteine
S-adenosyl-L-methionine
S-adenosyl-L-homocysteine
L-glutamate-5-semialdehyde
L-selenocysteine
L-methionine
methylglyoxal
1-octanal
isobutanal
acetaldehyde
(S)-lactaldehyde
D-glyceraldehyde
α-D-glucopyranose
β-D-glucopyranose
β-D-ribopyranose
α-D-galactopyranose
β-D-galactopyranose
β-L-rhamnopyranose
α-L-rhamnopyranose
aldehydo-D-ribose
α-D-ribofuranose
β-D-ribofuranose
methanol
ethanol
glycerol
phytosphingosine
D-erythro-sphinganine
sphinganine 1-phosphate
phytosphingosine 1-phosphate
myo-inositol
1D-myo-inositol 2-monophosphate
1D-myo-inositol 1-monophosphate
1D-myo-inositol 6-monophosphate
1D-myo-inositol 5-monophosphate
1D-myo-inositol 4-monophosphate
1D-myo-inositol 3-monophosphate
1-(oleoyl)-sn-glycero-3-phosphoethanolamine
1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate
1-oleoyl-sn-glycerol 3-phosphate
dioleoyl phosphatidate
phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)
apo-4'-lycopenal
all-trans-phytoene
all-trans phytofluene
15-cis-phytoene
all-trans-lycopene
γ-carotene
β-carotene
δ-carotene
α-carotene
(2E,6E)-farnesyl diphosphate
di-trans,octa-cis-undecaprenyl phosphate
geranylgeranyl diphosphate
all-trans-heptaprenyl diphosphate
2-cis,6-trans,10-trans-geranylgeranyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
1-(β-D ribofuranosyl)nicotinamide
5-dehydro-4-deoxy-D-glucuronate
β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp
maltotriose
unsaturated gellan tetrasaccharide
maltotetraose
maltoheptaose
maltopentaose
maltohexaose
4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine
4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl--D-galactosamine 6-sulfate
sucrose
β-D-cellobiose
colanic acid
N-acetyl-α-D-muramoyl-L-alanine(1-)
N-acetylmuramate
N-acetyl-α-D-glucosamine 1-phosphate
N-acetyl-β-D-galactosamine
N-acetyl-β-D-glucosamine
keto-D-fructose
β-D-fructofuranose
keto-L-rhamnulose
D-xylulose
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala
D-ribulose-1,5-bisphosphate
N-monoacetylchitobiose 6'-phosphate
N,N'-diacetylchitobiose 6'-phosphate
sucrose 6F-phosphate
β-D-cellobiose 6'-phosphate
ADP-α-D-glucose
GDP-α-D-mannose
GDP-α-D-mannuronate
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
D-erythrose 4-phosphate
D-sedoheptulose 7-phosphate
5-phospho-α-D-ribose 1-diphosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
β-D-fructose 1,6-bisphosphate
salicin 6-phosphate
arbutin-6-phosphate
D-tagatofuranose 6-phosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
α-D-galactose 6-phosphate
D-xylulose 5-phosphate
1-deoxy-D-xylulose 5-phosphate
D-ribulose 5-phosphate
aldehydo-D-ribose 5-phosphate
α-D-ribose 5-phosphate
β-D-ribose 5-phosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
L-rhamnulose 1-phosphate
α-D-galactose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
methyl β-D-glucoside 6-phosphate
D-altronate
aldehydo-L-galactonate
L-gulonate
cyclic-AMP
adenylo-succinate
5'-deoxyadenosine
pppGpp
ppGpp
reduced β-nicotinamide D-ribonucleotide
β-nicotinamide D-ribonucleotide
cyclic di-3',5'-guanylate
2-iminosuccinate