an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

2-dehydropantoate

3-deoxy-α-D-manno-2-octulosonate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

S-acetyldihydrolipoamide

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

O-acetyl-L-serine

hydrogen selenide

β-D-ribosylnicotinate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

porphobilinogen

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

2,2'-disulfonyl azobenzene

phthalate

DNA without lesion

cis,cis-muconate

(+)-muconolactone

muconolactone

(R)-mandelate

(S)-mandelate

4-amino-4-deoxychorismate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

all-trans-13,14-dihydroretinol

salicyl alcohol

methylsalicylate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

(E)-2-benzylidenesuccinyl-CoA

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

carbonic acid

ethanolamine

isochorismate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

4-guanidinobutyramide

5-hydroxy-feruloyl-CoA

5-hydroxyferulate

sinapoyl-CoA

sinapate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

pregn-5-ene-3,20-dione-17-ol

5-androstene-3,17-dione

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

pregn-5-ene-3,20-dione

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

dihydroxyacetone

4-pyridoxolactone

H₂

1,4-dihydroxy-2-naphthoate

1-deoxy-L-glycero-tetrulose 4-phosphate

acetoacetate

4-fumaryl-acetoacetate

(L-threonylcarbamoyl)adenylate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

2-oleoylglycerol

glutathione disulfide

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

N-succinyl-L,L-2,6-diaminopimelate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

7-epicholate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

L-arginino-succinate

2-iminoacetate

α-D-glucosamine 1-phosphate

N⁵-carboxyaminoimidazole ribonucleotide

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

glutathioselenol

selenodiglutathione

quinolinate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

N-acetyl-D-muramate 6-phosphate

2-amino-3-carboxymuconate-6-semialdehyde

α-D-galacturonate 1-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

L-dehydro-ascorbate

aminoacetone

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

H₂O

CO₂

8-amino-7-oxononanoate

pimeloyl-CoA

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(R)-pantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

lipid IV_A

lipid A disaccharide (E. coli)

hydroxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

lipoamide

dihydrolipoamide

isopentenyl diphosphate

autoinducer 2

S-ribosyl-L-homocysteine

(R)-mevalonate

3-amino-1-hydroxyacetone 1-phosphate

scopolin

4-hydroxybenzaldehyde

cis-coumarinic acid-β-D-glucoside

4-methylumbelliferyl glucoside

ammonia

glycerone phosphate

coproporphyrinogen III

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

thiamine phosphate

3-keto-β-D-galactose

phosphoenolpyruvate

citrate

oxaloacetate

oxalosuccinate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

hydrogen peroxide

dethiobiotin

7,8-diaminopelargonate

3-deoxy-D-manno-octulosonate 8-phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

(S)-dihydroorotate

lipid X

3-dehydroshikimate

shikimate

succinate semialdehyde

xanthine

5-enolpyruvoyl-shikimate 3-phosphate

orotidine 5'-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

acetyl phosphate

arsenite

urea

prenyl diphosphate

morphinone

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

3'-phosphoadenylyl-sulfate

prephenate

preuroporphyrinogen

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

(S)-4-amino-5-oxopentanoate

N-acetyl-L-glutamate 5-semialdehyde

shikimate 3-phosphate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

5-aminolevulinate

carbamoyl phosphate

anthranilate

N-(5-phosphoribosyl)-anthranilate

5-amino-6-(D-ribitylamino)uracil

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

dITP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

dIMP

XTP

cyclic-AMP

dGMP

dAMP

AMP

GDP

adenylo-succinate

IMP

GTP

ADP

ATP

pppGpp

ppGpp

GMP

dGDP

dGTP

dADP

dATP

XMP

hypoxanthine

2'-deoxyinosine

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

2'-deoxyadenosine

2'-deoxyguanosine

ITP

IDP

dIDP

5'-deoxyadenosine

guanine

adenine

thymine

uracil

preQ₁

dUDP

dCDP

dTDP

dUTP

dTTP

dCTP

dTMP

dUMP

dCMP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CMP

UMP

UDP

CDP

CTP

UTP

NADPH

NADH

NADP⁺

NAD⁺

cytidine-3'-monophosphate

uridine 3'-monophosphate

UDP-α-D-glucose

ADP-α-D-glucose

dTDP-α-D-glucose

CDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucuronate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

GDP-4-dehydro-6-deoxy-β-L-galactose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

CDP-ascarylose

CDP-3,6-dideoxy-D-glycero-4-hexulose

CMP-3-deoxy-β-D-manno-octulosonate

inosine

xanthosine

guanosine

adenosine

2'-deoxyuridine

2'-deoxycytidine

thymidine

uridine

cytidine

5'-deoxy-5'-fluoroadenosine

precorrin-1

precorrin-2

sirohydrochlorin

orotate

(S)-1-pyrroline-5-carboxylate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-phosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

6,7-dimethyl-8-(1-D-ribityl)lumazine

FMNH₂

FAD

FMN

riboflavin

coumarin

scopoletin

4-methylumbelliferone

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

all-trans-retinyl palmitate

all-trans-retinol

3-oxo-24-ethyl-cholest-5-ene

sitosterol

3-oxo-24-ethyl-cholest-4-ene

3-oxo-24-ethyl-26-hydroxy-cholest-4-ene

3-oxo-24-ethyl-cholest-4-en-26-oyl-CoA

3-oxo-24-ethyl-cholest-4,24-dien-26-oyl-CoA

3-oxo-24-(isopropanoyl)-cholest-4,24-dien-26-oyl-CoA

3,24-dioxo-cholest-4-en-26-oate

3-oxo-24-ethyl-cholest-4-en-26-oate

3-oxo-24-ethyl-26-al-cholest-4-ene

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

geranyl diphosphate

(3S)-linalool

(3R)-linalool

di-trans,octa-cis-undecaprenol

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

1-oleoyl-sn-glycerol 3-phosphate

α-Kdo-(2→6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

phlorisovalerophenone

morphine

deoxycohumulone

deoxyhumulone

4-prenylphlorisovalerophenone

L-galactono-1,4-lactone

D-glucono-1,5-lactone

isovaleryl-CoA

2-methylbutanoyl-CoA

phenylacetyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(3S)-hydroxyadipyl-CoA

(E)-2-methylcrotonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2E,5Z)-tetradecenoyl-CoA

methylacrylyl-CoA

4-hydroxybutanoyl-CoA

trans-caffeoyl-CoA

4-hydroxybenzoyl-CoA

2-methylacetoacetyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

acetyl-CoA

malonyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

(R)-methylmalonyl-CoA

phytenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

crotonyl-CoA

oleoyl-CoA

octanoyl-CoA

decanoyl-CoA

palmitoyl-CoA

propanoyl-CoA

butanoyl-CoA

pristanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

3-oxoadipyl-CoA

3-oxodecanoyl-CoA

acetoacetyl-CoA

D-gluconate

aldehydo-L-galactonate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

XXXG xyloglucan oligosaccharide

β-D-cellobiose

maltotriose

XLLG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

allolactose

sucrose

α-lactose

α-maltose

maltopentaose

maltohexaose

maltoheptaose

maltotetraose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

D-glyceraldehyde

glycolaldehyde

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-neuraminate

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

N-acetyl-α-D-glucosamine 1-phosphate

glycerol

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

lotaustralin

neolinustatin

linamarin

linustatin

taxiphyllin

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-glyceraldehyde 3-phosphate

aldehydo-D-galacturonate

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

4-methylphenol

L-homocysteine

pristanate

oleate

palmitate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

(3E,5Z)-tetradecadienoate

(15Z)-tetracosenoate

phytenate

octanoate

decanoate

butanoate

(R)-pantoate

acetate

aldehydo-D-glucuronate

salicylate

4-coumarate

4-aminobenzoate

glyoxylate

2-oxoglutarate

pyruvate

2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

4-hydroxybutanoate

(R)-lactate

(R)-glycerate

chorismate

succinate

L-aspartate

fumarate

(S)-malate

formate

cis-aconitate

D-threo-isocitrate

L-α-amino-ε-keto-pimelate

L-tyrosine

L-cysteine

L-glutamine

L-serine

L-asparagine

glycine

L-threonine

N^ω-hydroxy-L-arginine

L-lysine

L-arginine

L-glutamate

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

S-sulfanyl-L-cysteine

O-acetyl-L-homoserine

3-phospho-L-serine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

L-phenylalanine

L-tryptophan

L-alanine

L-leucine

L-proline

D-glutamate

β-alanine

L-citrulline

L-glutamate-5-semialdehyde

L-ornithine

hypoglycin A

S-sulfo-L-cysteine

1-aminocyclopropane-1-carboxylate

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-cystine

L-homoserine

S-adenosyl-L-homocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-selenocysteine

meso-diaminopimelate

L-isoleucine

L-valine

L-methionine

L,L-diaminopimelate

L-cystathionine

D-alanine

nicotinamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

androsterone

campest-4-en-3-one

phenylacetate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

pregnenolone

testosterone

progesterone

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3-oxocholest-4,24-dien-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

cholest-4-en-3-one

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

17-α-hydroxypregnenolone

3-β-hydroxyandrost-5-en-17-one

cholest-5-en-3-one

cholesterol

isocholate

3-dehydrocholate

glycocholate

cholate

campest-4-en-3β-ol

5α-androstane-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

phytate

D-myo-inositol (1,2,3,4,5)-pentakisphosphate

ethanol

butan-1-ol

methanol

selenate

thiosulfate

selenide

selenite

molybdate

sulfate

hydrogensulfite

hydrogencarbonate

sulfite

superoxide

phosphate

triphosphate

diphosphate

Fe³⁺

Mg²⁺

Cu²⁺

Fe²⁺

Ca²⁺

ammonium

H⁺

trimethyl sulfonium

L-ascorbate

thiamine

nicotinate

pyridoxal

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

menaquinol-7

menaquinol-6

menaquinol-8

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-8

Reactive Blue 5

(R)-NADHX

(S)-NADHX

agmatine

dehydrospermidine

spermidine

putrescine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

coenzyme A

dimethyl sulfide

glutathione

S-sulfanylglutathione

3-sulfopyruvate

L-cysteate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

(R)-S-lactoylglutathione

5,10-methenyltetrahydrofolate mono-L-glutamate

nitric oxide

monodehydroascorbate radical

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-D-mannosamine 6-phosphate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

oxygen

hydrogen sulfide

protoporphyrinogen IX

Mg-protoporphyrin

magnesium-protoporphyrin IX 13-monomethyl ester

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrin IX

siroheme

protoheme

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

nitrous oxide

N₂

hydrogen cyanide

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

ethylphosphate

DNA with lesion

preQ₀

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-hydroxybenzoate

urate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

coumarinate

trans-caffeate

1-propanal

butan-1-al

acetaldehyde

methylglyoxal

α-D-glucosamine 6-phosphate

2-iminosuccinate

2-iminobutanoate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B