ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C160

2-carboxy-L-threo-pentonate

C159

2-carboxy-L-xylonolactone

C14153

2,3-dioxo-L-gulonate

C162

cyclic- 3,4-O-oxalyl-L-threonate

C435

bisorganyltrisulfane

C163

dehydroascorbate (bicyclic form)

C158

cyclic-2,3-O-oxalyl-L-threonate

C12054

L-dehydro-ascorbate

C13702

1-piperideine 6-carboxylate

C13983

α-D-galacturonate 1-phosphate

C14156

L-xylo-hex-3-ulono-1,4-lactone

C12046

L-gulono-1,4-lactone

C1010

ammonia

C335

7-epicholate

C908

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C352

2-iminoacetate

C12848

N5-carboxyaminoimidazole ribonucleotide

C4690

selenodiglutathione

C4688

glutathioselenol

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C183

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

C186

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

C187

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C3376

(S)-4-hydroxy-2-oxohexanoate

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C12415

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

C12626

3-oxo-5,6-didehydrosuberyl-CoA

C12628

2-oxepin-2(3H)-ylideneacetyl-CoA

C12630

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

C15180

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

C13929

cyclohexane-1-carbonyl-CoA

C13930

cyclohexane-1-carboxylate

C1357

3-oxopimeloyl-CoA

C1399

3-hydroxypimeloyl-CoA

C1148

6-oxocyclohex-1-ene-1-carbonyl-CoA

C1155

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

C12407

crotonate

C939

butanoyl phosphate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C6030

core oligosaccharide-lipid A (E. coli K-12 core type)

C15156

dialurate

C15181

(S)-5-amino-3-oxohexanoate

C623

(3S,5S)-3,5-diaminohexanoate

C11868

N2-succinyl-L-ornithine

C14075

N2-succinyl-L-arginine

C2470

sulfoethylcysteine

C14084

2-(sulfomethyl)thiazolidine-4-carboxylate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C4674

glutathione disulfide

C11711

(R)-1-amino-2-propanol O-2-phosphate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C7865

urea

C13928

urea-1-carboxylate

C12340

diethylthiophosphate

C13552

dimethylthiophosphate

C12342

diethylphosphate

C11760

prephenate

C12192

carbonic acid

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C1078

(S)-2-amino-6-oxohexanoate

C12350

7,8-diaminopelargonate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C1440

nigerose

C13638

N2-succinyl-L-glutamate 5-semialdehyde

C11869

N2-succinylglutamate

C14179

4-acetamidobutanal

C14137

4-acetamidobutanoate

C1038

α-ribazole

C11483

glycolate

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C10261

ADP-L-glycero-β-D-manno-heptose

C1098

acrylamide

C1096

acrylate

C1303

4-guanidinobutyramide

C13919

4-guanidinobutanoate

C8366

(indol-3-yl)acetamide

C11756

propionamide

C965

benzoylsuccinyl-CoA

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C13851

hydrogenobyrinate

C15215

(L-threonylcarbamoyl)adenylate

C12044

L-histidinol phosphate

C13627

DNA without lesion

C12352

(S)-dihydroorotate

C873

coproporphyrinogen III

C1196

S-methyl-5'-thioadenosine

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C12254

ethanolamine

C12409

creatinine

C3656

D-gluconate 6-phosphate

C1325

4-amino-4-deoxychorismate

C12288

(E)-2-benzylidenesuccinyl-CoA

C922

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

C11715

quinolinate

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C14218

L-β-lysine

C12394

6-phospho D-glucono-1,5-lactone

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C927

carbon monoxide

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C1530

(2R,3S)-3-isopropylmalate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C6359

(S)-2-acetolactate

C11539

xanthine

C192

adenosine 5'-phosphoselenate

C2325

α-D-galactosyl-diphosphoundecaprenol

C6361

acetoacetate

C11654

selenophosphate

C11836

hydroxypyruvate

C12214

(S)-4-amino-5-oxopentanoate

C12355

dethiobiotin

C13950

pimeloyl-CoA

C1130

8-amino-7-oxononanoate

C11946

N-(5-phosphoribosyl)-anthranilate

C1353

3-phosphooxypyruvate

C1538

2-C-methyl-D-erythritol 4-phosphate

C11802

4'-phosphopantetheine

C12218

α-D-glucosamine 1-phosphate

C12139

preuroporphyrinogen

C3319

4-methyl-2-oxopentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C11800

(R)-pantothenate

C15306

2,3-didehydroadipyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C2586

(E)-4-coumaroyl-CoA

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C13854

hydrogen selenide

C1102

O-acetyl-L-serine

C1268

(R)-4'-phosphopantothenate

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C12178

histidinal

C12176

histidinol

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C11826

oxalosuccinate

C3262

3-methyl-2-oxobutanoate

C12286

ectoine

C11928

(2S)-4-acetamido-2-aminobutanoate

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C12164

H2

C12390

D-erythro-imidazole-glycerol-phosphate

C12125

imidazole acetol-phosphate

C3684

3-deoxy-α-D-manno-2-octulosonate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C891

citrate

C11895

N-Formyl-L-kynurenine

C12315

5,6-dimethylbenzimidazole

C1036

α-ribazole 5'-phosphate

C8333

(indol-3-yl)pyruvate

C11693

(indol-3 yl)acetyl-CoA

C13681

5-carboxymethyl-2-hydroxymuconate

C933

L-canavanine

C6614

O-ureido-L-homoserine

C932

canavaninosuccinate

C12056

L-arginino-succinate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C11930

N-acetylglutamyl-phosphate

C10349

glycerone phosphate

C12274

enol-phenylpyruvate

C12162

hydrogen peroxide

C6099

lipid IVA

C949

lipid X

C10794

lipid A disaccharide (E. coli)

C285

coenzyme B

C13751

methanophenazine

C283

CoB-CoM heterodisulfide

C12331

dihydromethanophenazine

C1528

2-dehydropantoate

C3850

5-amino-6-(D-ribitylamino)uracil

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C12048

γ-L-glutamyl 5-phosphate

C11857

β-nicotinate D-ribonucleotide

C9422

nicotinate adenine dinucleotide

C11606

thiamine phosphate

C11604

thiamine diphosphate

C13850

hydrogenobyrinate a,c-diamide

C1265

4-phosphooxy-L-threonine

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C11832

orotidine 5'-phosphate

C928

CO2

C1231

5-aminolevulinate

C11767

porphobilinogen

C12402

cyclohex-1,5-diene-1-carbonyl-CoA

C1184

5-phospho-β-D-ribosylamine

C2191

carbamoyl phosphate

C655

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

C1002

anthranilate

C11479

phosphoenolpyruvate

C11653

shikimate

C11652

shikimate 3-phosphate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C12369

3-dehydroquinate

C1431

3-dehydroshikimate

C1108

acetyl phosphate

C996

adenosine 5'-phosphosulfate

C11794

3'-phosphoadenylyl-sulfate

C11543

H2O

C6444

oxaloacetate

C6043

4-methylphenol

C12247

L-homocysteine

C10799

DNA with lesion

C11480

phenylacetate

C803

ethylphosphate

C9821

cobalt-factor III

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9871

cobalt-precorrin-5A

C1218

adenosylcobalamin 5'-phosphate

C9822

cobalt-precorrin-3

C9847

cobalt-precorrin-4

C9811

cob(II)yrinate c-monoamide

C9861

cobyrinate

C9800

adenosylcobyrate

C9845

cobalt-sirohydrochlorin

C9799

cobalt-precorrin-2

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9855

adenosyl-cobinamide phosphate

C9830

adenosylcobinamide-GDP

C9828

cob(II)yrinate a,c-diamide

C9865

Mg-protoporphyrin

C6624

protoheme

C13422

hydrogen cyanide

C2255

N2

C7662

uroporphyrinogen-I

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C7676

protoporphyrin IX

C7632

siroheme

C7118

hydrogen sulfide

C7121

oxygen

C11281

2-chloroacetate

C8419

sn-glycerol 3-phosphate

C6430

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

C6426

2-O-(α-D-mannosyl)-D-glycerate

C11476

(R)-glycerate

C6427

2,3-diphospho-D-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C6744

CMP-N-acetyl-β-neuraminate

C6763

(R)-methylmalonate-semialdehyde

C6741

(S)-methylmalonate-semialdehyde

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6290

(S)-3-hydroxy-isobutanoate

C6287

2-octaprenylphenol

C8959

monodehydroascorbate radical

C8962

nitric oxide

C8958

superoxide

C12856

parathion

C12858

paraoxon

C12862

4-nitrophenol

C4960

N-acetyl-β-neuraminate

C4606

S-(hydroxymethyl)glutathione

C4734

dimethyl sulfide

C4678

glutathione

C3978

thiocyanate

C4644

S-sulfanylglutathione

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C12587

L-cysteate

C12637

3-sulfopyruvate

C12629

coenzyme M

C12623

sulfoacetaldehyde

C2209

(2R)-3-sulfolactate

C7994

(2R)-phospho-3-sulfolactate

C7864

Fe3+

C4328

ammonium

C4320

H+

C11023

Fe2+

C11006

Co2+

C11009

Mg2+

C7017

selenite

C7030

nitrate

C7028

nitrite

C7022

selenide

C7014

sulfate

C7020

selenate

C7024

thiosulfate

C7052

trithionate

C7025

OH-

C7034

hydrogensulfite

C7016

sulfite

C7036

hydrogencarbonate

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C1689

trimethyl sulfonium

C6596

2-iminosuccinate

C6599

2-iminobutanoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3564

spermine

C3548

putrescine

C3574

spermidine

C11220

glycerophosphoglycerol

C11219

glycerophosphoserine

C11222

sn-glycero-3-phosphoethanolamine

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C2860

fluoroacetaldehyde

C11509

fluoroacetate

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C7869

acetamide

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C10996

nicotinamide

C4800

3α,7α,12β-trihydroxy-5β-cholan-24-oate

C4743

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

C4513

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C4560

3,24-dioxocholest-4-en-26-oyl-CoA

C4818

3-oxochol-4-en-24-oyl-CoA

C10548

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10544

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10545

9α-hydroxyandrosta-1,4-diene-3,17-dione

C10538

androsta-1,4-diene-3,17-dione

C10542

androst-4-ene-3,17-dione

C6306

3-dehydrocholate

C6352

isocholate

C6358

glycocholate

C6332

cholate

C9096

(indol-3-yl)acetate

C8496

N-acetyl-L-glutaminyl-L-glutamine

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C1434

D-alanyl-D-alanine

C5313

2-methylbutanoyl-CoA

C4924

glutaryl-CoA

C2242

(S)-3-aminobutanoyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C4920

isovaleryl-CoA

C5102

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

C5092

(3R)-hydroxy-5-trans-dodecenoyl-CoA

C5316

(R)-2-hydroxyglutaryl-CoA

C4927

(E)-glutaconyl-CoA

C4922

isobutanoyl-CoA

C4945

(2E,5Z)-tetradecenoyl-CoA

C5123

2-trans,6-cis-tridecadienoyl-CoA

C5143

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

C5137

(3E)-undec-2-enoyl-CoA

C5135

(3R)-hydroxy-undecanoyl-CoA

C5117

2-trans-6-trans-tridecadienoyl-CoA

C5144

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5127

(3R)-hydroxy, 4-trans-undecenoyl-CoA

C5133

(3R)-hydroxy-nonanoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5119

4-cis-undecenoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C4937

3'-dephospho-CoA

C5014

phenylacetyl-CoA

C4984

vinylacetyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C4911

methylacrylyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5314

2-methylacetoacetyl-CoA

C4901

succinyl-CoA

C5294

benzoyl-CoA

C5298

acetyl-CoA

C4192

chenodeoxycholoyl-CoA

C4961

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

C4196

choloyl-CoA

C5306

3-methylcrotonyl-CoA

C4899

3-methylglutaconyl-CoA

C5919

(S)-methylmalonyl-CoA

C5920

(R)-methylmalonyl-CoA

C1337

crotonyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C7343

(S)-malyl-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C5635

oleoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C5922

(S)-3-hydroxyhexanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C2744

(S)-3-hydroxyhexadecanoyl-CoA

C6059

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7162

cerotoyl-CoA

C7169

2-carboxy-cerotoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14662

hexanoyl-CoA

C14697

decanoyl-CoA

C14674

lauroyl-CoA

C14677

octanoyl-CoA

C10758

3-oxoadipyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C6197

3-oxooctanoyl-CoA

C6201

3-oxododecanoyl-CoA

C6198

3-oxodecanoyl-CoA

C6200

3-oxohexanoyl-CoA

C6083

3-oxo-palmitoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C6079

3-oxo-myristoyl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C10076

L-galactono-1,4-lactone

C10049

FMNH2

C10052

FMN

C10053

FAD

C10050

FADH2

C5392

(S)-NADHX

C5394

(R)-NADHX

C14497

NADPH

C14500

NADH

C4018

NADP+

C4020

NAD+

C1869

caldariellaquinol

C5563

ubiquinol-10

C5535

ubiquinol-7

C5543

ubiquinol-8

C5551

ubiquinol-9

C1680

menaquinol-8

C1863

demethylmenaquinol-8

C1866

3-demethylubiquinol-10

C1865

3-demethylubiquinol-7

C1867

3-demethylubiquinol-8

C1868

3-demethylubiquinol-9

C10048

caldariellaquinone

C10614

coenzyme A

C6007

MoO2-molybdopterin cofactor

C6003

guanylyl molybdenum cofactor

C10597

7,8-dihydrofolate monoglutamate

C7129

5,6,7,8-tetrahydrofolate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C10986

L-ascorbate

C10982

nicotinate

C10988

riboflavin

C4210

pyridoxal 5'-phosphate

C4214

pyridoxine 5'-phosphate

C10143

menadione

C4985

(S)-1-pyrroline-5-carboxylate

C2308

precorrin-6A

C2305

precorrin-1

C2302

precorrin-3A

C2311

precorrin-2

C2323

precorrin-7

C2297

precorrin-8x

C2317

precorrin-6B

C2300

precorrin-5

C2314

precorrin-3B

C2320

precorrin-4

C1705

sirohydrochlorin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12708

7,8-dihydroneopterin 3'-phosphate

C12664

7,8-dihydroneopterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C9454

adenine

C9455

guanine

C7755

2'-deoxyinosine

C7848

2'-deoxyguanosine

C7813

2'-deoxyadenosine

C15094

xanthosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C7785

hypoxanthine

C7743

dAMP

C7840

dGMP

C7834

dIMP

C7749

dITP

C7751

dGTP

C7783

dATP

C7747

dIDP

C7807

dGDP

C7823

dADP

C7817

IDP

C7795

GDP

C7757

ADP

C7827

GMP

C7741

IMP

C7811

XMP

C7809

AMP

C7753

XTP

C7759

ITP

C7745

GTP

C7844

ATP

C8755

dCMP

C11481

orotate

C8744

dTMP

C8770

dUMP

C8739

uracil

C8760

UTP

C8752

dUDP

C8724

dUTP

C8720

dTDP

C8764

dTTP

C8733

dCDP

C8772

dCTP

C8732

CDP

C8761

CTP

C8714

UDP

C7764

UDP-α-D-galacturonate

C7804

UDP-α-D-galactofuranose

C7794

UDP-N-acetyl-α-D-quinovosamine

C7826

UDP-N-acetyl-α-D-fucosamine

C8567

UDP-2-acetamido-2,6-dideoxy-β-L-arabino-hex-4-ulose

C8559

UDP-2-acetamido-2,6-dideoxy-α-D-xylo-hex-4-ulose

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7740

UDP-α-D-sulfoquinovopyranose

C8666

UDP-α-D-galactose

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7780

UDP-α-D-glucose

C7722

UDP-α-D-glucuronate

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7790

UDP-N-acetyl-α-D-mannosamine

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C1939

dTDP-α-D-glucose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C2245

CMP

C2241

UMP

C9540

preQ1

C13382

acrylonitrile

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C6829

salicylaldehyde

C3093

urate

C7060

3-hexaprenyl-4-hydroxybenzoate

C6934

4-hydroxybenzoate

C6868

futalosine

C6973

dehypoxanthine futalosine

C6975

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

C3477

amino-parathion

C3475

methyl parathion

C3649

benzaldehyde

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2915

menadiol

C12814

4-aminophenol

C11421

protocatechuate

C11429

salicylate

C8968

benzoate

C8974

4-aminobenzoate

C8950

chorismate

C6442

succinate

C6443

fumarate

C5596

L-aspartate

C2802

(S)-malate

C8536

3-carboxy-cis,cis-muconate

C8534

cis-aconitate

C3288

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

C8531

D-threo-isocitrate

C6185

(R)-lactate

C3420

propanoate

C3421

formate

C11517

acetate

C3308

pyruvate

C3418

butanoate

C3409

octanoate

C6371

3-oxoadipate

C13298

(3E,5Z)-tetradecadienoate

C5001

apo-4'-lycopenoate

C11482

(R)-pantoate

C2021

aldehydo-D-galacturonate

C2047

aldehydo-D-glucuronate

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3351

glyoxylate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C3536

L-α-amino-ε-keto-pimelate

C3526

L-kynurenine

C5579

L-serine

C11443

creatine

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C5588

L-leucine

C5581

L-proline

C5597

L-alanine

C12067

glycine

C5609

L-glutamine

C8797

D-glutamate

C5607

L-glutamate

C5630

Nω-hydroxy-L-arginine

C5605

L-histidine

C5584

L-lysine

C5642

L-arginine

C5573

L-tyrosine

C5612

L-cysteine

C5577

L-threonine

C5643

L-asparagine

C2469

L-phenylalanine

C5575

L-tryptophan

C8799

D-alanine

C12073

L-aspartyl-4-phosphate

C3402

3-phospho-L-serine

C3628

sarcosine

C15000

N-acetyl-L-ornithine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C13322

N-carbamoyl-L-aspartate

C11955

O-acetyl-L-homoserine

C12303

L-citrulline

C5603

L-isoleucine

C5571

L-valine

C12241

L-4-hydroxyglutamate semialdehyde

C12263

1-aminocyclopropane-1-carboxylate

C2426

S-sulfo-L-cysteine

C12229

O-phospho-L-homoserine

C12239

L-aspartate 4-semialdehyde

C12231

L-ornithine

C12233

L-glutamate-5-semialdehyde

C12245

L-homoserine

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C5583

L-methionine

C5580

L,L-diaminopimelate

C5595

L-cystathionine

C5618

L-2,4-diaminobutanoate

C5702

a coenzyme-A group

C6090

methylglyoxal

C2040

diacetyl

C10060

(R)-acetoin

C2858

glycolaldehyde

C3523

1-propanal

C3529

1-octanal

C3483

formaldehyde

C3500

acetaldehyde

C6245

(R)-lactaldehyde

C7087

α-D-glucopyranose

C7085

β-D-glucopyranose

C2065

aldehydo-D-ribose

C2061

α-D-ribofuranose

C2062

β-D-ribofuranose

C3450

ethanol

C3448

methanol

C3731

glycerol

C10527

myo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C4420

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

C6241

1-oleoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C10874

apo-4'-lycopenal

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C9077

(2E,6E)-farnesyl diphosphate

C11012

phytyl diphosphate

C4545

3-nonaprenyl-4-hydroxybenzoate

C4549

3-heptaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C4553

3-octaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C15301

all-trans-nonaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C10229

galactosyl-glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C6026

galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10228

galactosyl-(glucosyl)2-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10230

glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10231

glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate

C10232

glucosyl-(heptosyl)2-Kdo2-lipid A-phosphate

C10233

glucosyl-(heptosyl)2-Kdo2-lipid A

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C10227

heptosyl-Kdo2-lipid IVA

C10235

heptosyl-Kdo2-lipid A

C10234

(heptosyl)2-Kdo2-lipid A

C10224

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

C10226

α-Kdo-(2→6)-lipid IVA

C10688

maltotriose

C10689

maltotetraose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C10693

sucrose

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C14474

N-acetyl-α-D-mannosamine

C8835

β-D-fructofuranose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10381

a peptidoglycan dimer (mycobacteria)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10372

a peptidoglycan dimer (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C10263

ADP-α-D-glucose

C1009

GDP-α-D-mannose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10356

4-phospho-D-erythronate

C15289

D-sedoheptulose 7-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10340

D-erythrose 4-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C3678

aldehydo-L-galactonate

C3679

L-gulonate

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C10267

pppGpp

C10266

ppGpp

C10288

adenylo-succinate

C5552

5'-deoxyadenosine

C4240

reduced β-nicotinamide D-ribonucleotide

C4243

β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C1817

cyclic di-3',5'-guanylate