an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2-carboxy-L-threo-pentonate

cyclic- 3,4-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

cyclic-2,3-O-oxalyl-L-threonate

2-carboxy-L-xylonolactone

pyruvic oxime

4-oxoglutaramate

1-piperideine 6-carboxylate

5-oxo-L-proline

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-maleyl-acetoacetate

homogentisate

selenodiglutathione

glutathioselenol

pseudouridine

creatinine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

ammonia

2-(α-hydroxyethyl)thiamine diphosphate

2-amino-3-carboxymuconate-6-semialdehyde

autoinducer 2

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

butanoyl phosphate

N⁵-carboxyaminoimidazole ribonucleotide

4-amino-2-methyl-5-pyrimidinemethanol

3-keto-L-gulonate 6-phosphate

L-dehydro-ascorbate

dehydroascorbate (bicyclic form)

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

3-keto-L-gulonate

2,3-dioxo-L-gulonate

2-iminoacetate

(4-hydroxyphenyl)acetate

(4S)-4-hydroxy-2-oxoheptanedioate

2-hydroxy-5-carboxymethylmuconate semialdehyde

(lipoyl)adenylate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

S-adenosyl 3-(methylsulfanyl)propylamine

(R)-pantothenate

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

S-ribosyl-L-homocysteine

(S)-2,3,4,5-tetrahydrodipicolinate

2-dehydropantoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

β-D-ribosylnicotinate

lipid X

5-(methylsulfanyl)-α-D-ribose

S-methyl-5-thio-α-D-ribose 1-phosphate

carbon monoxide

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

5-(methylsulfanyl)-ribulose 1-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

itaconate

formamide

4-imidazolone-5-propanoate

urocanate

pimeloyl-CoA

(S)-2-amino-6-oxohexanoate

hydroxylamine

3-phosphooxypyruvate

lipid A disaccharide (E. coli)

lipid IV_A

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(5S)-5-benzyl-hydantoin

(5R)-5-benzyl-hydantoin

3-ureidopropanoate

hydroxypyruvate

propanoyl phosphate

selenophosphate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

DNA without lesion

nicotinate adenine dinucleotide

5-amino-6-(D-ribitylamino)uracil

dethiobiotin

urea-1-carboxylate

dimethyl sulfoxide

benzoylsuccinyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

4-acetamidobutanal

4-acetamidobutanoate

(E)-3-(methoxycarbonyl)pent-2-enedioate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

(L-threonylcarbamoyl)adenylate

(S)-4-amino-5-oxopentanoate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

nitrilotriacetate

iminodiacetate

3-methylmuconolactone

histidinal

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

α-D-galactosyl-diphosphoundecaprenol

α-D-glucopyranosyl-diphosphoundecaprenol

pseudouridine 5'-phosphate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(indol-3-yl)pyruvate

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

5-dehydro-2-deoxy-D-gluconate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

3-amino-1-hydroxyacetone 1-phosphate

γ-L-glutamyl 5-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

3'-phosphoadenylyl-sulfate

3-deoxy-D-glycero-2,5-hexodiulosonate

isopentenyl diphosphate

prenyl diphosphate

4-fumaryl-acetoacetate

acetoacetate

glutathionylspermidine

1-deoxy-L-glycero-tetrulose 4-phosphate

urea

1-pyrroline

2-dehydro-3-deoxy-D-gluconate

acetyl phosphate

O-ureido-L-homoserine

4-hydroxy-2-nonenal

malonate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

salicyl alcohol

methylsalicylate

3α,7α-dihydroxy-24-oxo-5β-cholestanoyl CoA

3-oxo-3-phenylpropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

2-maleylacetate

nigerose

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

(enterobacterial common antigen)-undecaprenyl diphosphate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

(R)-2,3-dihydroxy-3-methylpentanoate

L-arginino-succinate

canavaninosuccinate

L-canavanine

N-acetyl-L-glutamate 5-semialdehyde

1,4-dihydroxy-2-naphthoate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

N-(5-phosphoribosyl)-anthranilate

L-quinate

3-dehydroshikimate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

orotidine 5'-phosphate

1,6-anhydro-N-acetyl-β-muramate

carbamoyl phosphate

5-carboxymethyl-2-hydroxymuconate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

β-nicotinate D-ribonucleotide

quinolinate

dihydrolipoamide

S-acetyldihydrolipoamide

L-histidinol phosphate

histidinol

5-aminolevulinate

porphobilinogen

thiamine diphosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

adenosine 3',5'-bisphosphate

(L-aspartyl)adenylate

(2,3-dihydroxybenzoyl)adenylate

3-dehydroquinate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

thiamine phosphate

(S)-dihydroorotate

4-amino-4-deoxychorismate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

oxalosuccinate

carbonic acid

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-aminopentanal

aminoacetone

shikimate

shikimate 3-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

chloramphenicol

(+)-muconolactone

cis,cis-muconate

muconolactone

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

4-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

S-formylglutathione

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

isochorismate

5-phospho-β-D-ribosylamine

5-enolpyruvoyl-shikimate 3-phosphate

xanthine

O-acetyl-L-serine

hydrogen selenide

3-keto-β-D-galactose

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

prephenate

phosphoenolpyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(2S)-2-isopropylmalate

H₂

5-dehydro-4-deoxy-D-glucarate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

citrate

oxaloacetate

L-selenocystathionine

tartronate semialdehyde

α-D-glucosamine 1-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

3-deoxy-α-D-manno-2-octulosonate

anthranilate

ethanolamine

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

glutathione disulfide

preuroporphyrinogen

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

N-acetylglutamyl-phosphate

N-acetyl-D-muramate 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

dihydroxyacetone

2-amino-2-deoxy-D-gluconate 6-phosphate

glycerone phosphate

hydrogen peroxide

D-gluconate 6-phosphate

coproporphyrinogen III

CO₂

2-phosphoglycolate

H₂O

glycolate

(R)-lipoate

molybdopterin

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

nicotinamide

nicotinate

riboflavin

thiamine

L-ascorbate

pyridoxal

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

menadione

all-trans-retinol

dCMP

orotate

5,6-dihydrouracil

5,6-dihydrothymine

dTDP

cytidine 2',3'-cyclic monophosphate

cytidine-3'-monophosphate

uridine 2'3'-cyclic monophosphate

uridine 3'-monophosphate

dUTP

dCTP

CTP

UTP

dTTP

dCDP

CDP

dUDP

dUMP

dTMP

UDP

uracil

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-α-D-xylose

dTDP-4-acetamido-4,6-dideoxy-α-D-galactose

dTDP-viosamine

dTDP-α-D-glucose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

thymine

CMP

UMP

preQ₁

guanine

adenine

hypoxanthine

cobalt-precorrin-3

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

precorrin-1

precorrin-2

cobyrinate

sirohydrochlorin

cob(I)alamin

adenosylcobalamin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

FADH₂

reduced riboflavin

FMNH₂

FAD

FMN

7,8-dihydroneopterin 3'-phosphate

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

7,8-dihydroneopterin 2',3'-cyclic phosphate

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(S)-1-pyrroline-5-carboxylate

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

xanthosine

guanosine

inosine

adenosine

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

IDP

GDP

ADP

GMP

IMP

XMP

AMP

ITP

GTP

ATP

acrylonitrile

preQ₀

(indole-3-yl)acetonitrile

hydrogen cyanide

salicylaldehyde

urate

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-vinylguaiacol

ferulate

protocatechuate

salicylate

2,3-dihydroxybenzoate

benzoate

4-aminobenzoate

benzaldehyde

phenylacetaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

ubiquinol-8

menaquinol-8

menaquinol-6

menaquinol-7

demethylmenaquinol-6

demethylmenaquinol-7

demethylmenaquinol-8

3-demethylubiquinol-8

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

4-nitrophenol

4-methylphenol

2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-phenylethylamine

4,6-dichloro-3-methylcatechol

3,4-dihydroxyphenylacetate

catechol

2,4-dichlorotoluene

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

3-(methylsulfanyl)propanoate

3-(4-hydroxyphenyl)pyruvate

4-(methylsulfanyl)-2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

glyoxylate

2-oxoglutarate

2-oxobutanoate

pyruvate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

L-α-amino-ε-keto-pimelate

L-citrulline

L-methionine

L-tyrosine

L-histidine

L-arginine

L-cysteine

L-proline

L-asparagine

glycine

L-alanine

L-lysine

L-tryptophan

L-serine

L-threonine

L-valine

L-leucine

L-isoleucine

L-aspartate

L-glutamate

L-glutamine

1-aminocyclopropane-1-carboxylate

L-homoserine

L-canaline

L-ornithine

O-succinyl-L-homoserine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-homocysteine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

hypoglycin A

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

L-selenocysteine

L-isoglutamine

L,L-diaminopimelate

N^ω-hydroxy-L-arginine

L-cystathionine

L-aspartyl-4-phosphate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-carbamoyl-L-aspartate

D-serine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

D-glutamate

D-cysteine

D-proline

D-alanine

L-saccharopine

L-2-amino-3-oxobutanoate

L-selenomethionine

seleno-L-homocysteine

3-phospho-L-serine

S-methyl-L-methionine

sarcosine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

3-methyl-cis,cis-muconate

chorismate

succinate

fumarate

(S)-malate

D-galactarate

D-glucarate

3-(carbamoylamino)-2-methylpropanoate

3-carboxy-cis,cis-muconate

trans-aconitate

cis-aconitate

D-threo-isocitrate

(S)-lactate

(R)-lactate

(R)-glycerate

sophorosyloxydocosanoate

13-sophorosyloxydocosanoate 6',6''-diacetate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

propanoate

acetate

formate

butanoate

octanoate

3-oxoadipate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

oleate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

di-homo-γ-linolenate

γ-linolenate

linoleate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

stearate

palmitate

fluoroacetate

D-gluconate

(R)-pantoate

D-mannonate

5-chloro-5-deoxy-D-ribonate

5-deoxy-D-glucuronate

4-deoxy-L-threo-hex-4-enopyranuronate

D-tagaturonate

aldehydo-D-galacturonate

a coenzyme-A group

Reactive Blue 5

methylglyoxal

diacetyl

fluoroacetaldehyde

3-(N-morpholino)propanal

glycolaldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-mannose

β-D-mannopyranose

β-D-ribopyranose

β-D-galactopyranose

α-D-galactopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

L-glyceraldehyde

1-propanal

butan-1-al

1-octanal

formaldehyde

acetaldehyde

(S)-lactaldehyde

(R)-lactaldehyde

propan-1-ol

butan-1-ol

methanol

ethanol

glycerol

D-mannitol

D-mannitol 1-phosphate

ethylene glycol

(S)-propane-1,2-diol

(R)-propane-1,2-diol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

1-oleoyl-2-lyso-glycerone phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

apo-4'-lycopenal

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

all-trans-retinyl palmitate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

β-L-fucopyranose

α-L-fucopyranose

keto-D-fructose

β-D-fructofuranose

L-fuculose

keto-L-rhamnulose

D-ribulose

D-xylulose

L-ribulose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-neuraminate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

3'-ketolactose

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

ADP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

D-tagatofuranose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

L-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

aldehydo-D-arabinose 5-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-fuculose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

XLLG xyloglucan oligosaccharide

XXXG xyloglucan oligosaccharide

XLXG xyloglucan oligosaccharide

XXLG xyloglucan oligosaccharide

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

allolactose

4-(4-deoxy-α-D-galact-4-enuronosyl)-D-galacturonate

sucrose

α,α-trehalose

α-lactose

D-altronate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

ppGpp

pppGpp

adenosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

5'-deoxyadenosine

adenylo-succinate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

cyclic-AMP

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

cyclic di-3',5'-guanylate

NADH

NADPH

NAD⁺

NADP⁺

5'-deoxy-5'-fluoroadenosine

hypoglycin B

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phenylacetate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

cobalt-factor III

cobalt-sirohydrochlorin

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

protoheme

nitrous oxide

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

siroheme

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-mannosyl)-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

monodehydroascorbate radical

nitric oxide

superoxide

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

chloramphenicol 3-acetate

4-nitrophenyl phosphate

dimethyl sulfide

S-(hydroxymethyl)glutathione

thiocyanate

glutathione

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

methanesulfonate

1-butanesulfonate

isethionate

3-(N-morpholino)propanesulfonate

(R)-S-lactoylglutathione

Fe³⁺

K⁺

ammonium

H⁺

Co²⁺

Ni²⁺

Fe²⁺

Mg²⁺

Cu²⁺

trimethyl sulfonium

hydrogensulfite

selenite

selenide

selenate

sulfite

sulfate

nitrate

molybdate

hydrogencarbonate

nitrite

thiosulfate

phosphonate

phosphate

triphosphate

diphosphate

chloride

2-iminopropanoate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

4-aminobutanal

putrescine

spermidine

cadaverine

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

2-chloro-5-methyl-maleylacetate

3-chloro-2-methyl-dienelactone

3-chloro-2-methyl-maleylacetate

3-chloro-cis,cis-muconate

3,5-dichloro-2-methyl-muconate

2-chloro-5-methyl-dienelactone

3,5-dichloro-2-methyl-muconolactone

acetamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

2-iminosuccinate

2-iminobutanoate

2-methylbutanoyl-CoA

isobutanoyl-CoA

dihomo γ-linolenoyl-CoA

itaconyl-CoA

phenylacetyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

(3S)-hydroxyadipyl-CoA

2-methylacetoacetyl-CoA

3α,7α,12α-trihydroxy-24-oxo-5-β-cholestanoyl CoA

choloyl-CoA

chenodeoxycholoyl-CoA

benzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

4-hydroxybenzoyl-CoA

3'-dephospho-CoA

succinyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(3S)-citryl-CoA

acetyl-CoA

malonyl-CoA

crotonyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

butanoyl-CoA

propanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

trans-dienelactone

cis-dienelactone

D-glucono-1,5-lactone

(S)-NADHX

(R)-NADHX