an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

CO₂

3-methyl-2-oxobutanoate

H₂O

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

histidinol

L-histidinol phosphate

glycerone phosphate

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

selenophosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

glycolate

L-β-lysine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(R)-5-phosphomevalonate

(R)-mevalonate

isopentenyl diphosphate

(R)-mevalonate diphosphate

oxaloacetate

citrate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

lipid IV_A

quinolinate

L-selenocystathionine

phosphoenolpyruvate

3-dehydroshikimate

3-dehydroquinate

DNA without lesion

coproporphyrinogen III

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

orotidine 5'-phosphate

2-maleylacetate

nicotinate adenine dinucleotide

3-deoxy-D-arabino-heptulosonate 7-phosphate

hydrogen peroxide

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

4-methyl-2-oxopentanoate

L-gulono-1,4-lactone

N-carbamoylputrescine

lipid A disaccharide (E. coli)

lipid X

luteolin 7-O-β-D-glucuronide

luteolin 7-O-β-D-diglucuronide

luteolin 7-O-[β-D-glucosyluronate-(1,2)-β-D-glucosiduronate]-4'-O-β-D-glucosiduronate

α-D-glucosamine 1-phosphate

2-dehydropantoate

3-phosphooxypyruvate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

4-chloro-2-methyl-cis,cis-muconate

4-methylmuconolactone

2-chloro-4-methyl-cis,cis-muconate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

1,4-dihydroxy-2-naphthoate

O-acetyl-L-serine

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-C-methyl-D-erythritol 4-phosphate

urocanate

4-imidazolone-5-propanoate

prenyl diphosphate

formate

carboxyphosphate

carbamoyl phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

thiamine diphosphate

thiamine phosphate

3-deoxy-α-D-manno-2-octulosonate

cyclopentanone

cyclopentanol

1-deoxy-L-glycero-tetrulose 4-phosphate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

5-amino-6-(D-ribitylamino)uracil

(R)-pantothenate

urea

L-canavanine

7-carboxy-7-deazaguanine

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

8-amino-7-oxononanoate

pimeloyl-CoA

(S)-2-amino-6-oxohexanoate

norspermidine

carboxynorspermidine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

(2R,3S)-3-methylmalate

citraconate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

aminoacetone

3-(4-deoxy-β-D-gluc-4-enuronosyl)-N-acetyl-D-glucosamine

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

porphobilinogen

5-aminolevulinate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

5-phospho-β-D-ribosylamine

(R)-4'-phosphopantothenate

(S)-dihydroorotate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

3-deoxy-D-manno-octulosonate 8-phosphate

(lipoyl)adenylate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

acetyl phosphate

butanoyl phosphate

oxalosuccinate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

5-enolpyruvoyl-shikimate 3-phosphate

4-amino-4-deoxychorismate

shikimate

xanthine

N¹-(5-phospho-β-D-ribosyl)glycinamide

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

shikimate 3-phosphate

ethanolamine

cis,cis-muconate

(+)-muconolactone

muconolactone

N-acetyl-D-muramate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

histidinal

canavaninosuccinate

L-arginino-succinate

N-acetylglutamyl-phosphate

γ-L-glutamyl 5-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-acetyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

anthranilate

N-(5-phosphoribosyl)-anthranilate

3-deoxy-D-glycero-2,5-hexodiulosonate

5-dehydro-D-gluconate

prephenate

2-amino-3-carboxymuconate-6-semialdehyde

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

autoinducer 2

S-ribosyl-L-homocysteine

N⁵-carboxyaminoimidazole ribonucleotide

N-succinyl-L,L-2,6-diaminopimelate

glutathione disulfide

hydrogen selenide

glutathioselenol

selenodiglutathione

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

1,4-dihydroxy-2-naphthoyl-CoA

2-keto-L-gulonate

1-piperideine 6-carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

carbamate

L-α-amino-ε-keto-pimelate

L-citrulline

L-cysteine

L-methionine

L-phenylalanine

L-lysine

L-glutamate

L-glutamine

L-aspartate

L-valine

glycine

L-histidine

L-isoleucine

L-leucine

L-arginine

L-alanine

L-serine

L-threonine

L-proline

L-tryptophan

L-tyrosine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-homocysteine

L-aspartate 4-semialdehyde

O-succinyl-L-homoserine

L-homoserine

hypoglycin A

L-canaline

L-ornithine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

D-ornithine

meso-diaminopimelate

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

L-saccharopine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-carbamoyl-L-aspartate

3-phospho-L-serine

L-cystathionine

L,L-diaminopimelate

D-glutamate

D-alanine

D-proline

D-lysine

(R)-β-lysine

β-alanine

protocatechuate

2,3-dihydroxybenzoate

4-aminobenzoate

acetate

D-gluconate

(R)-pantoate

5-chloro-5-deoxy-D-ribonate

D-mannonate

orotate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-threo-hex-4-enopyranuronate

D-tagaturonate

4-deoxy-L-erythro-hex-4-enopyranuronate

aldehydo-D-galacturonate

β-D-glucuronate

pristanate

palmitate

stearate

octanoate

laurate

7-hydroxylaurate

decanoate

butanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

(15Z)-tetracosenoate

oleate

phytenate

linoleate

α-linolenate

4-hydroxybutanoate

(R)-lactate

propanoate

pyruvate

2-oxobutanoate

2-oxoglutarate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-oxoadipate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

3-methyl-cis,cis-muconate

α,ω-9Z-octadecenedioate

fumarate

succinate

(S)-malate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phlorisovalerophenone

α-Kdo-(2→6)-lipid IV_A

daunorubicin

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

geranyl diphosphate

4-prenylphlorisovalerophenone

deoxycohumulone

deoxyhumulone

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

L-gulonate

L-idonate

D-altronate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-α-D-glucose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-D-fructofuranose

β-D-galactopyranose

α-D-galactopyranose

α-D-xylopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

keto-D-fructose

D-xylulose

D-ribulose

L-ribulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

sucrose

isoprimeverose

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

α,α-trehalose

maltopentaose

maltohexaose

maltotetraose

maltoheptaose

maltotriose

stachyose

unsaturated gellan tetrasaccharide

raffinose

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

4,5-dichlorobenzene-1,2-diol

4,6-dichloro-3-methylcatechol

3,6-dichloro-4-methylcatechol

5-chloro-3-methylcatechol

3,4-dichloro-6-methylcatechol

myo-inositol

1D-myo-inositol 3-monophosphate

ethanol

butan-1-ol

methylglyoxal

acetaldehyde

butan-1-al

caldariellaquinone

diacetyl

urate

luteolin

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

2,5-dichlorotoluene

(1R,2S)-3,6-dichloro-4-methylcyclohexa-3,5-diene-1,2-diol

3,4-dichlorotoluene

(1R,2S)-3,4-dichloro-6-methylcyclohexa-3,5-diene-1,2-diol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

adenine

guanine

XMP

IMP

AMP

GMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dATP

dGTP

dITP

dGMP

dAMP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

7,8-dihydrolumazine

tetrahydromethanopterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

reduced riboflavin

FMNH₂

riboflavin

FMN

6,7-dimethyl-8-(1-D-ribityl)lumazine

uracil

preQ₁

isoguanine

UDP

dUDP

CDP

dCDP

CTP

dTMP

dUMP

dTTP

dCMP

dUTP

UTP

dCTP

dTDP

CMP

UMP

cytidine

uridine

2'-deoxyuridine

2'-deoxycytidine

thymidine

adenosylcobalamin

cobyrinate

precorrin-2

precorrin-1

coenzyme A

(R)-lipoate

adenylo-succinate

cyclic-GMP

5'-deoxyadenosine

ppGpp

pppGpp

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NAD⁺

NADP⁺

NADH

NADPH

5'-deoxy-5'-fluoroadenosine

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

cob(I)alamin

phenylacetate

isobutanoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

acetyl-CoA

succinyl-CoA

malonyl-CoA

3-methylglutaconyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

phenylacetyl-CoA

4-hydroxybutanoyl-CoA

(E)-glutaconyl-CoA

3'-dephospho-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

16-hydroxypalmitoyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

(+)-2-chloromuconolactone

(+)-5-chloromuconolactone

2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

2-chloro-4-methyl-cis-dienelactone

2,5-dichloro-3-methyl-muconolactone

3,6-dichloro-3a-methyl-dihydro-3H-furo[3,2-b]furan-2,5-dione

3,5-dichloro-2-methyl-muconolactone

5-chloro-3-methyl-cis-dienelactone

2,5-dichloro-4-methyl-muconolactone

5-chloro-trans-dienelactone

3-chloro-2-methyl-dienelactone

2-chloro-5-methyl-dienelactone

2-chloro-3-methyl-dienelactone

2-methyl-cis-dienelactone

2-methyl-trans-dienelactone

5-chloro-2-methyl-dienelactone

glutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

thiocyanate

methanethiol

S-sulfanylglutathione

agmatine

spermine

spermidine

cadaverine

putrescine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

superoxide

hydroxyl radical

sulfate

selenide

hydrogencarbonate

sulfite

thiosulfate

selenate

selenite

OH^-

hydrogensulfite

chloride

phosphonate

phosphate

triphosphate

diphosphate

Fe³⁺

Mo²⁺

Zn²⁺

Mg²⁺

Fe²⁺

ammonium

H⁺

Na⁺

2-chloroacetate

2-chloro-cis,cis-muconate

2,3-dichloro-5-methyl-muconate

2-chloro-2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

3,5-dichloro-2-methyl-muconate

2-(2,4-dichloro-5-oxofuran-2-yl)propanoate

2,5-dichloro-3-methyl-muconate

2,3-dichloro-cis,cis-muconate

2-chloro-2-(2-chloro-5-oxofuran-2-yl)acetate

3-chloro-cis,cis-muconate

5-chloromaleylacetate

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

2-chloro-3-methyl-maleylacetate

5-chloro-2-methyl-maleylacetate

preQ₀

hydrogen cyanide

(R)-citramalate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

ω-saturated C55 dolichol phosphate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)

2-iminosuccinate

2-iminobutanoate

oxygen

hydrogen sulfide

protoporphyrinogen IX

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

Mg-protoporphyrin

protoheme

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosyl-cobinamide phosphate

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

ethylphosphate

DNA with lesion