an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

CO₂

coproporphyrinogen III

shikimate 3-phosphate

shikimate

acetoacetate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

carbamoyl phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

urea

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

S-formylglutathione

phosphoenolpyruvate

3-deoxy-D-manno-octulosonate 8-phosphate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

3-dehydroshikimate

oxaloacetate

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

7,8-diaminopelargonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

8-amino-7-oxononanoate

hydroxypyruvate

L-histidinol phosphate

imidazole acetol-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

prephenate

citrate

selenophosphate

canavaninosuccinate

O-ureido-L-homoserine

L-arginino-succinate

(S)-dihydroorotate

4-amino-4-deoxychorismate

prenyl diphosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

D-gluconate 6-phosphate

oxalosuccinate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N-(5-phosphoribosyl)-anthranilate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

2-dehydro-3-deoxy-D-gluconate

2,5-dioxopentanoate

5-dehydro-4-deoxy-D-glucarate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

3'-phosphoadenylyl-sulfate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-deoxy-α-D-manno-2-octulosonate

S-methyl-5-thio-α-D-ribose 1-phosphate

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

carboxyphosphate

α-D-glucosamine 1-phosphate

4-maleyl-acetoacetate

homogentisate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

quinolinate

β-nicotinate D-ribonucleotide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

hydrogen peroxide

1-deoxy-L-glycero-tetrulose 4-phosphate

γ-L-glutamyl 5-phosphate

5-methylcytosine

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

D-erythro-imidazole-glycerol-phosphate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

4-carboxy-2-hydroxymuconate-6-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

anthranilate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

N-ethylsuccinimide

N-ethylmaleimide

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

lipid IV_A

ADP-L-glycero-β-D-manno-heptose

4-methyl-2-oxopentanoate

3-dehydroquinate

4'-phosphopantetheine

4-fumaryl-acetoacetate

3-phosphooxypyruvate

xanthine

4-hydroxy-2-nonenal

glycolate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

porphobilinogen

dethiobiotin

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

2-iminoacetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

6-amino-2-oxohexanoate

lipid A disaccharide (E. coli)

lipid X

2-C-methyl-D-erythritol 4-phosphate

isopentenyl diphosphate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

(2-hydroxyphenyl)acetate

(R)-mandelate

(S)-mandelate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

3-oxopropanoate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

DNA without lesion

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-adenosyl 3-(methylsulfanyl)propylamine

hydrogenobyrinate a,c-diamide

glutathione disulfide

N-ethylammeline

deethylsimazine

2-phosphoglycolate

pimeloyl-CoA

(S)-2-amino-6-oxohexanoate

6-phospho D-glucono-1,5-lactone

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-methylmalate

citraconate

histidinol

histidinal

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

orotidine 5'-phosphate

ethanolamine

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

L-gulono-1,4-lactone

2-aminoacetaldehyde

2-maleylacetate

2-protocatechuoylphloroglucinolcarboxylate

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

(4S)-4-hydroxy-2-oxoheptanedioate

(4Z)-2-oxohept-4-enedioate

tartronate semialdehyde

7-carboxy-7-deazaguanine

4-methyl-3-oxoadipate

(S)-ureidoglycolate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(D-ribitylamino)uracil

α-ribazole

α-ribazole 5'-phosphate

hydrogenobyrinate

glycerone phosphate

2-dehydropantoate

N⁵-carboxyaminoimidazole ribonucleotide

(R)-3-(phenyl)lactoyl-CoA

N-acetyl-D-muramate 6-phosphate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

(R)-4'-phosphopantothenate

(R)-pantothenate

nicotinate adenine dinucleotide

5-amino-6-(5-phospho-D-ribitylamino)uracil

5,6-dimethylbenzimidazole

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

N-ethylammelide

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-oxoglutaramate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

2-pyrone-4,6-dicarboxylate

preuroporphyrinogen

thiamine diphosphate

hydrogen selenide

glutathioselenol

selenodiglutathione

5-aminopentanoate

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

enol-phenylpyruvate

ammonia

1-piperideine-2-carboxylate

bisorganyltrisulfane

L-cysteinylglycine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

carbamate

L-α-amino-ε-keto-pimelate

L-citrulline

L-leucine

L-glutamate

L-glutamine

L-aspartate

glycine

L-alanine

L-tyrosine

L-phenylalanine

L-tryptophan

L-histidine

L-proline

L-serine

L-threonine

L-valine

L-isoleucine

L-arginine

L-lysine

L-cysteine

L-methionine

L-homocysteine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

L-ornithine

L-glutamate-5-semialdehyde

L-homoserine

L-aspartate 4-semialdehyde

L-cystine

O-succinyl-L-homoserine

L-canaline

hypoglycin A

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

S-sulfanyl-L-cysteine

L-saccharopine

L-aspartyl-4-phosphate

2-hydroxy-5-oxoproline

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

cis-4-hydroxy-D-proline

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

3-phospho-L-serine

L-cystathionine

L,L-diaminopimelate

D-alanine

D-glutamate

D-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

protocatechuate

5-chloroprotocatechuate

trans-cinnamate

4-aminobenzoate

acetate

D-mannonate

5-chloro-5-deoxy-D-ribonate

D-gluconate

(R)-pantoate

orotate

5-deoxy-D-glucuronate

(S)-1-pyrroline-5-carboxylate

pristanate

palmitate

stearate

octanoate

laurate

7-hydroxylaurate

decanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

(15Z)-tetracosenoate

oleate

phytenate

linoleate

α-linolenate

(2R,3S)-2-methylisocitrate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(R)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

pyruvate

formate

propanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

glyoxylate

2-oxoglutarate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

4-(methylsulfanyl)-2-oxobutanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

3-oxoadipate

3-carboxy-cis,cis-muconate

cis-aconitate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

chorismate

D-glucarate

D-galactarate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

acetamide

α-Kdo-(2→6)-lipid IV_A

(heptosyl)₂-Kdo₂-lipid A

heptosyl-Kdo₂-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

L-gulonate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-glucuronate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactofuranose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

β-L-rhamnopyranose

α-L-rhamnopyranose

β-D-fructofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-ribopyranose

β-D-glucopyranose

α-D-glucopyranose

β-D-allopyranose

β-D-allofuranose

D-glyceraldehyde

α-L-arabinopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

glycolaldehyde

keto-D-fructose

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

glycerol

D-mannitol

α,α-trehalose

maltopentaose

maltohexaose

maltotriose

maltotetraose

maltoheptaose

3,4-dihydroxyphenylacetate

myo-inositol

scyllo-inositol

1D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1-keto-D-chiro-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

ethanol

methanol

3-(N-morpholino)propanal

methylglyoxal

butan-1-al

acetaldehyde

formaldehyde

menadione

caldariellaquinone

diacetyl

4-hydroxybenzoate

urate

quercetin

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-9

3-demethylubiquinol-7

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

ubiquinol-10

ubiquinol-9

ubiquinol-7

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

guanine

adenine

AMP

XMP

IMP

GMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dGTP

dATP

dITP

dAMP

dGMP

hypoxanthine

adenosine

guanosine

2'-deoxyguanosine

7,8-dihydrolumazine

(6R)-4a-hydroxy-tetrahydrobiopterin

6-carboxy-5,6,7,8-tetrahydropterin

tetrahydromethanopterin

5,6,7,8-tetrahydromonapterin

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin triphosphate

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

thio-molybdenum cofactor

MoO₂-molybdopterin cofactor

FMNH₂

reduced riboflavin

FADH₂

FMN

riboflavin

FAD

6,7-dimethyl-8-(1-D-ribityl)lumazine

uracil

cytosine

thymine

preQ₁

isoguanine

CTP

UTP

UDP

dTDP

dTMP

CDP

dCDP

dUDP

dCMP

dUMP

dUTP

dCTP

dTTP

CMP

UMP

5-fluorouracil

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

cobyrinate

precorrin-5

precorrin-4

precorrin-3A

precorrin-3B

precorrin-6A

precorrin-2

precorrin-1

precorrin-6B

precorrin-8x

precorrin-7

coenzyme A

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

5-fluorocytosine

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

ethene

(indol-3-yl)acetate

(+)-7-epi-jasmonate

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

acetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

malonyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3'-dephospho-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

isobutanoyl-CoA

isovaleryl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

hexadecanedioyl-CoA

16-hydroxypalmitoyl-CoA

palmitoyl-CoA

stearoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

propanoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-dodec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

taurine

isethionate

1-butanesulfonate

3-(N-morpholino)propanesulfonate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

methanethiol

S-sulfanylglutathione

betaine aldehyde hydrate

choline sulfate

choline

betaine aldehyde

agmatine

spermidine

putrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

superoxide

hydroxyl radical

hydrogencarbonate

selenide

selenate

sulfite

OH^-

selenite

hydrogensulfite

sulfate

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Ni²⁺

Cu²⁺

Zn²⁺

Fe²⁺

Co²⁺

Mg²⁺

H⁺

ammonium

2-chloroacetate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

preQ₀

(indole-3-yl)acetonitrile

acrylonitrile

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(R)-3-(phenyl)lactate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminosuccinate

2-iminobutanoate

oxygen

hydrogen sulfide

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrinogen IX

protoporphyrin IX

Mg-protoporphyrin

siroheme

protoheme

adenosylcobyrate

adenosyl-cob(III)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(I)yrinate a,c-diamide

cob(II)yrinate c-monoamide

cob(I)inamide

adenosylcobinamide-GDP

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal