an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

1-piperideine-2-carboxylate

ammonia

1,2-dihydro-β-NADP

1-piperideine 6-carboxylate

5-aminopentanoate

4-oxoglutaramate

selenodiglutathione

preuroporphyrinogen

shikimate

shikimate 3-phosphate

S-ribosyl-L-homocysteine

autoinducer 2

isopropylamine

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

2-keto-L-gulonate

hydrogen selenide

enol-phenylpyruvate

glutathioselenol

hydrogenobyrinate

N-succinyl-L,L-2,6-diaminopimelate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-aminobutanoate

4-imidazolone-5-propanoate

urocanate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(S)-ureidoglycolate

L-histidinol phosphate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

glutathione disulfide

2-dehydro-3-deoxy-D-galactonate 6-phosphate

6-phospho D-glucono-1,5-lactone

3-hydroxy-4-methylbenzaldehyde

5-(hydroxymethyl)-2-methylphenol

(salicyl)adenylate

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-carboxymethylmuconate semialdehyde

3-deoxy-α-D-manno-2-octulosonate

5-dehydro-4-deoxy-D-glucarate

2,5-dioxopentanoate

hydroxypyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(S)-mandelate

(R)-mandelate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(4-hydroxyphenyl)acetate

acrylate

3-maleylpyruvate

4-methylgentisate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

3-methylgentisate

(2E)-2-methyl-4,6-dioxohept-2-enedioate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

glycolate

2-dehydro-3-deoxy-D-galactonate

5-dehydro-D-fructose

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

3-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

(4,5-dihydro-5-oxofuran-2-yl)-acetate

muconolactone

(+)-muconolactone

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

carboxyphosphate

2-phosphoglycolate

7-carboxy-7-deazaguanine

chloramphenicol

glutathionylspermidine

(2R,3S)-2,3-dimethylmalate

diethylthiophosphate

diethylphosphate

dimethylthiophosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

histidinal

histidinol

(S)-2-amino-6-oxohexanoate

D-gluconate 6-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

ethanolamine

4-methyl-3-oxoadipate

creatinine

prenyl diphosphate

α-D-ribose-1-methylphosphonate 5-phosphate

5-phospho-α-D-ribose 1,2-cyclic phosphate

N-acetyl-D-muramate 6-phosphate

hydrogenobyrinate a,c-diamide

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

O-acetyl-L-serine

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

N-(5-phosphoribosyl)-anthranilate

3-deoxy-D-manno-octulosonate 8-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

cis,cis-muconate

(4Z)-2-oxohept-4-enedioate

(4S)-4-hydroxy-2-oxoheptanedioate

propanoyl phosphate

5-amino-6-(D-ribitylamino)uracil

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

DNA without lesion

4-amino-4-deoxychorismate

orotidine 5'-phosphate

xanthine

acetoacetate

6-amino-2-oxohexanoate

coproporphyrinogen III

5-guanidino-2-oxopentanoate

carbonic acid

citraconate

(2R,3S)-3-methylmalate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

γ-L-glutamyl 5-phosphate

hydrogen peroxide

4-hydroxy-2-nonenal

oxalosuccinate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

hydroxyatrazine

N-isopropylammelide

ethylamine

urea

anthranilate

2-dehydro-3-deoxy-D-gluconate

5-dehydro-D-gluconate

tartronate semialdehyde

5-enolpyruvoyl-shikimate 3-phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

3-oxopropanoate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2-dehydro-3-deoxy-D-gluconate 6-phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

L-canavanine

prephenate

α-D-glucosamine 1-phosphate

isopentenyl diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

carbamoyl phosphate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

3-deoxy-D-glycero-2,5-hexodiulosonate

3-dehydroquinate

3-dehydroshikimate

5-aminolevulinate

porphobilinogen

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

5-phospho-β-D-ribosylamine

(S)-dihydroorotate

glycerone phosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

succinate semialdehyde

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

(R)-pantothenate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

citrate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

oxaloacetate

phosphoenolpyruvate

4'-phosphopantetheine

CO₂

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

H₂O

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

ethylphosphate

hydrogen cyanide

cob(II)yrinate a,c-diamide

protoheme

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrin IX

siroheme

hydrogen sulfide

oxygen

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

acrylonitrile

preQ₀

chloramphenicol 3-acetate

parathion

paraoxon

4-nitrophenol

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

Fe³⁺

K⁺

H⁺

ammonium

Co²⁺

Fe²⁺

Ni²⁺

Mo²⁺

Mn²⁺

hydrogensulfite

selenite

OH^-

superoxide

thiosulfate

hydrogencarbonate

selenate

sulfite

nitrate

sulfate

phosphonate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

sn-glycero-3-phosphoethanolamine

ferrichrome

glycine betaine

betaine aldehyde

choline

choline sulfate

betaine aldehyde hydrate

(2Z)-2-aminobut-2-enoate

agmatine

spermidine

putrescine

cadaverine

S-(hydroxymethyl)glutathione

thiocyanate

glutathione

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

3-(N-morpholino)propanesulfonate

1-butanesulfonate

isethionate

(R)-S-lactoylglutathione

2-methylbutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

anthraniloyl-CoA

(+)-7-epi-jasmonoyl-CoA

salicyl-CoA

gentisyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

4-hydroxybenzoyl-CoA

isobutanoyl-CoA

3-methylglutaconyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

malonyl-CoA

acetyl-CoA

succinyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(S)-malyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

methane

(+)-7-epi-jasmonate

nicotinate

riboflavin

thiamine

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

menadione

FAD

FADH₂

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinone

caldariellaquinol

ubiquinol-8

3-demethylubiquinol-8

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

isoguanine

8-oxo-dGTP

8-oxo-GTP

2'-deoxyadenosine

2'-deoxyinosine

pppGpp

ppGpp

hypoxanthine

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

IMP

5'-deoxyadenosine

adenylo-succinate

XMP

GMP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

dADP

dATP

IDP

ITP

dIDP

dITP

dGDP

dGTP

GDP

GTP

AMP

ATP

ADP

xanthosine

inosine

adenosine

guanosine

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dCTP

dUTP

UTP

CTP

dCMP

dTMP

dUMP

UMP

CMP

dTDP

dCDP

dUDP

UDP

CDP

cytidine-3'-monophosphate

uridine 3'-monophosphate

GDP-α-D-glucose

ADP-α-D-glucose

preQ₁

uracil

thymine

adenine

guanine

5,6-dihydrouracil

5,6-dihydrothymine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

coenzyme A

(S)-1-pyrroline-5-carboxylate

precorrin-7

precorrin-8x

precorrin-6B

precorrin-6A

precorrin-3B

precorrin-3A

precorrin-4

precorrin-5

precorrin-2

precorrin-1

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

orotate

cyanuric acid

benzene

salicylaldehyde

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

urate

toluene

atrazine

amino-parathion

methyl parathion

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,5-xylenol

3-hydroxy-5-methylbenzaldehyde

3-(hydroxymethyl)-5-methylphenol

3,5-xylenol

4-aminophenol

3,4-dihydroxyphenylacetate

protocatechuate

catechol

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

salicylate

3-hydroxy-4-methyl-benzoate

3-hydroxy-5-methyl-benzoate

benzoate

4-aminobenzoate

diacetyl

methylglyoxal

3-(N-morpholino)propanal

glycolaldehyde

formaldehyde

acetaldehyde

butan-1-al

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-ribopyranose

α-L-arabinopyranose

α-D-xylopyranose

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

methanol

ethanol

glycerol

D-mannitol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

5-dehydro-4-deoxy-D-glucuronate

maltotriose

isoprimeverose

raffinose

maltotetraose

stachyose

maltopentaose

maltoheptaose

maltohexaose

4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

sucrose

α,α-trehalose

keto-D-tagatose

keto-D-sorbose

keto-D-psicose

keto-L-sorbose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

4-deoxy-L-threo-hex-4-enopyranuronate

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

4-phospho-D-erythronate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 1,7-bisphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

L-idonate

D-galactonate

D-mannonate

D-gluconate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

allantoate

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(3E)-2-oxohex-3-enedioate

chorismate

L-aspartate

succinate

fumarate

(S)-malate

α,ω-9Z-octadecenedioate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(2R,3S)-2-methylisocitrate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

2-oxobutanoate

glyoxylate

2-oxoglutarate

acetate

formate

propanoate

(R)-lactate

decanoate

7-hydroxylaurate

laurate

octanoate

gentisate

(15Z)-tetracosenoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

linoleate

α-linolenate

stearate

palmitate

oleate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

phytenate

5-deoxy-D-glucuronate

L-α-amino-ε-keto-pimelate

carbamate

L-serine

L-asparagine

L-tyrosine

L-threonine

glycine

L-glutamine

L-cysteine

L-histidine

L-lysine

L-arginine

L-glutamate

L-valine

L-phenylalanine

L-alanine

L-isoleucine

L-tryptophan

L-proline

L-leucine

L-methionine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-lysine

D-aspartate

D-alanine

D-arginine

cis-4-hydroxy-D-proline

L-isoglutamine

L-ornithine

L,L-diaminopimelate

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

L-saccharopine

iminoarginine

seleno-L-homocysteine

L-selenomethionine

3-phospho-L-serine

sarcosine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

L-proline betaine

D-proline betaine

N-methyl-L-proline

O-acetyl-L-homoserine

L-citrulline

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

L-canaline

S-adenosyl-L-methionine

hypoglycin A

O-phospho-L-homoserine

L-homoserine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine