an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

betaine aldehyde

H₂O

phosphoenolpyruvate

N-succinyl-L,L-2,6-diaminopimelate

CO₂

3-dehydroshikimate

3-dehydroquinate

(S)-dihydroorotate

citrate

3-deoxy-D-glycero-2,5-hexodiulosonate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

prenyl diphosphate

isopentenyl diphosphate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

urocanate

4-imidazolone-5-propanoate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

4-methyl-2-oxopentanoate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

succinate semialdehyde

formate

oxalosuccinate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

oxaloacetate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

5-phospho-β-D-ribosylamine

N-(5-phosphoribosyl)-anthranilate

N-acetyl-L-glutamate 5-semialdehyde

canavaninosuccinate

O-ureido-L-homoserine

L-arginino-succinate

(S)-2-amino-6-oxohexanoate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

4-amino-4-deoxychorismate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

quinolinate

β-nicotinate D-ribonucleotide

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-dehydro-4-deoxy-D-glucarate

2-hydroxy-5-carboxymethylmuconate semialdehyde

(2-hydroxyphenyl)acetate

homogentisate

glycolate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

xanthine

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

2-dehydro-3-deoxy-D-gluconate

hydrogen peroxide

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

shikimate

carbamoyl phosphate

carboxyphosphate

orotidine 5'-phosphate

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

D-gluconate 6-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

quercitrin

N,N-dimethylaniline-N-oxide

N,N-dimethylaniline

nicotine-1'-N-oxide

glycerone phosphate

DNA without lesion

D-erythro-imidazole-glycerol-phosphate

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

coproporphyrinogen III

creatinine

acetoacetate

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

5-methylcytosine

cyanamide

urea

L-selenocystathionine

2-dehydropantoate

4-aminobutanoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

β-D-fructose 2,6-bisphosphate

autoinducer 2

S-ribosyl-L-homocysteine

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

4-phosphooxy-L-threonine

gallate

digallate

nicotinate adenine dinucleotide

γ-L-glutamyl 5-phosphate

(2R,3S)-3-methylmalate

citraconate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(lipoyl)adenylate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

carbonic acid

histidinol

L-histidinol phosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

5-aminolevulinate

2-dehydro-3-deoxy-D-galactonate

acetyl phosphate

(R)-4'-phosphopantothenate

(R)-pantothenate

α-D-glucosamine 1-phosphate

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

1,4-dihydroxy-2-naphthoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

2-phosphoglycolate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

preuroporphyrinogen

porphobilinogen

(S)-4-amino-5-oxopentanoate

L-gulono-1,4-lactone

oxalate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3-phosphooxypyruvate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

histidinal

imidazole acetol-phosphate

N-acetylglutamyl-phosphate

L-canavanine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

chlorite

4-methyl-3-oxoadipate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

6-chlorohydroxyquinol

N-acetyl-D-muramate 6-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

prephenate

coenzyme F₃₉₀-A

2-C-methyl-D-erythritol 4-phosphate

urea-1-carboxylate

ethanolamine

2,5-dioxopentanoate

2-maleylacetate

5-aminopentanoate

glutathione disulfide

(2S)-lactyl-2-diphospho-5'-guanosine

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

hydrogen selenide

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

anthranilate

glutathioselenol

selenodiglutathione

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

S-(hydroxymethyl)mycothiol

enol-phenylpyruvate

ammonia

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

carbamate

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-citrulline

glycine

L-glutamate

L-glutamine

L-tryptophan

L-serine

L-aspartate

L-alanine

L-threonine

L-arginine

L-leucine

L-isoleucine

L-valine

L-lysine

L-proline

L-histidine

L-phenylalanine

L-tyrosine

L-cysteine

L-methionine

L-aspartate 4-semialdehyde

L-homocysteine

L-glutamate-5-semialdehyde

L-ornithine

1-aminocyclopropane-1-carboxylate

L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-succinyl-L-homoserine

L-canaline

O-phospho-L-homoserine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

D-ornithine

meso-diaminopimelate

seleno-L-homocysteine

L-aspartyl-4-phosphate

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

N⁶-hydroxy-L-lysine

N-formyl-L-glutamate

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-acetyl-L-methionine

N-acetyl-L-glutamate

sarcosine

N-carbamoyl-L-aspartate

3-phospho-L-serine

L,L-diaminopimelate

L-2,4-diaminobutanoate

L-cystathionine

D-glutamate

D-aspartate

D-proline

D-alanine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

protocatechuate

salicylate

2,3-dihydroxybenzoate

4-aminobenzoate

acetate

D-mannonate

D-gluconate

5-chloro-5-deoxy-D-ribonate

orotate

(R)-pantoate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

4-deoxy-L-threo-hex-4-enopyranuronate

aldehydo-D-galacturonate

pristanate

octanoate

palmitate

stearate

decanoate

laurate

7-hydroxylaurate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

13-[O(2')-β-D-glucopyranosyl-β-D-glucopyranosyloxy]docosanoate O(6'')-acetate

13-sophorosyloxydocosanoate 6',6''-diacetate

sophorosyloxydocosanoate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

oleate

(15Z)-tetracosenoate

phytenate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

linoleate

α-linolenate

(2R,3S)-2-methylisocitrate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(R)-lactate

(S)-lactate

(R)-3-hydroxybutanoate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

pyruvate

2-oxoglutarate

2-oxobutanoate

glyoxylate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

D-glucarate

α,ω-9Z-octadecenedioate

D-galactarate

succinate

fumarate

(S)-malate

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

6-aminopenicillanate

penicillin G

isopenicillin N

salicylaldehyde

glucosyl-oleandomycin

oleandomycin

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

(S)-nicotine

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

D-galactonate

L-gulonate

5-dehydro-4-deoxy-D-glucuronate

1-O-acetyl-α-maltose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-mannose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-4-dehydro-5-methyl-β-L-rhamnose

dTDP-4-O-demethyl-β-L-noviose

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-N-acetyl-β-neuraminate

p-nitrophenyl-α-L-rhamnopyranoside

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 1,7-bisphosphate

L-rhamnulose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

β-L-rhamnopyranose

α-L-rhamnopyranose

β-D-fructofuranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

D-glyceraldehyde

α-D-ribofuranose

keto-D-fructose

keto-L-rhamnulose

D-xylulose

L-ribulose

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-β-neuraminate

glycerol

D-mannitol

sucrose

α,α-trehalose

maltopentaose

maltohexaose

maltotriose

maltoheptaose

maltotetraose

stachyose

raffinose

catechol

3,4-dihydroxyphenylacetate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 4-monophosphate

ethanol

methanol

methylglyoxal

(S)-lactaldehyde

acetaldehyde

formaldehyde

2,5-piperidinedione

menadione

caldariellaquinone

diacetyl

4-hydroxybenzoate

quercetin

quercetin-3-glucoside

rutin

hesperidin

hesperitin-7-O-β-D-glucoside

prunin

naringin

menadiol

2,6-dichlorohydroquinone

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

2,4,6-trichlorophenol

phenol

4-nitrophenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

adenine

guanine

AMP

XMP

IMP

GMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dGTP

dATP

dITP

hypoxanthine

adenosine

guanosine

xanthosine

inosine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

tetrahydromethanopterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

FMNH₂

reduced riboflavin

FADH₂

FMN

riboflavin

FAD

6,7-dimethyl-8-(1-D-ribityl)lumazine

thymine

uracil

cytosine

isoguanine

dUMP

dUTP

UDP

dTMP

CDP

dCDP

dUDP

CTP

UTP

dTTP

dCTP

dTDP

UMP

CMP

uridine

cytidine

thymidine

2'-deoxyuridine

2'-deoxycytidine

5-fluorouracil

sirohydrochlorin

precorrin-1

precorrin-2

1-piperideine

coenzyme A

(R)-lipoate

oxidized coenzyme F₄₂₀-2

oxidized coenzyme F₄₂₀-0

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5'-deoxyadenosine

ppGpp

pppGpp

cyclic-AMP

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NAD⁺

NADP⁺

NADH

NADPH

5'-deoxy-5'-fluoroadenosine

5-fluorocytosine

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

phenylacetate

acetyl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

malonyl-CoA

succinyl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

isobutanoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

5-aminolevulinyl-CoA

4-hydroxybenzoyl-CoA

isovaleryl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

16-hydroxypalmitoyl-CoA

palmitoleoyl-CoA

myristoyl-CoA

palmitoyl-CoA

cis-vaccenoyl-CoA

stearoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

propanoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(S)-methylmalonyl-CoA

D-glucono-1,5-lactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

methanethiol

deacetylmycothiol

thiocyanate

mycothiol

S-sulfanylglutathione

spermidine

putrescine

cadaverine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

sn-glycero-3-phosphoethanolamine

glycerophosphoserine

glycerophosphoglycerol

superoxide

hydroxyl radical

selenate

hydrogencarbonate

sulfite

thiosulfate

OH^-

selenite

hydrogensulfite

sulfate

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

Fe²⁺

H⁺

K⁺

ammonium

2-chloroacetate

2-chloromaleylacetate

hydrogen cyanide

(S)-3-hydroxy-isobutanoate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

(2S)-2-phospholactate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

oxygen

hydrogen sulfide

protoporphyrinogen IX

uroporphyrinogen-III

protoporphyrin IX

uroporphyrinogen-I

siroheme

protoheme

ethylphosphate

DNA with lesion