an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

hydrogen peroxide

3-deoxy-D-arabino-heptulosonate 7-phosphate

phosphoenolpyruvate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

S-ribosyl-L-homocysteine

glycolate

2-phosphoglycolate

quinolinate

β-nicotinate D-ribonucleotide

CO₂

pseudaminate

thiamine diphosphate

thiamine phosphate

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

N-acetyl-L-glutamate 5-semialdehyde

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

N²-succinylglutamate

4-hydroxy-2-nonenal

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

oxaloacetate

5-aminopentanal

aminoacetone

citrate

nicotinate adenine dinucleotide

4'-phosphopantetheine

(S)-4-amino-5-oxopentanoate

isopentenyl diphosphate

prenyl diphosphate

8-amino-7-oxononanoate

pimeloyl-CoA

dethiobiotin

7,8-diaminopelargonate

ethanolamine

(R)-4'-phosphopantothenoyl-L-cysteine

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

adenosine 3',5'-bisphosphate

L-tartrate

(indol-3-yl)pyruvate

acetoacetate

4-fumaryl-acetoacetate

(2-hydroxyphenyl)acetate

homogentisate

tartronate semialdehyde

hydroxypyruvate

2-dehydropantoate

(R)-pantothenate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

DNA without lesion

3-oxopropanoate

carbamoyl phosphate

(S)-dihydroorotate

urocanate

4-imidazolone-5-propanoate

formamide

2-aminoacetaldehyde

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

glycerone phosphate

2-maleylacetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

cis,cis-muconate

3-methylmuconolactone

muconolactone

(+)-muconolactone

anthranilate

coniferaldehyde

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

5-dehydro-4-deoxy-D-glucarate

lipid X

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

4-amino-4-deoxychorismate

carbonic acid

S-formylglutathione

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

5-guanidino-2-oxopentanoate

N-acetylglutamyl-phosphate

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

porphobilinogen

5-aminolevulinate

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

N-succinyl-L,L-2,6-diaminopimelate

carboxyphosphate

(2E)-hexadecenal

propynoate

prop-2-ynal

4-imidazoleacetate

imidazole acetaldehyde

3,4-dihydroxyphenylacetaldehyde

4-acetamidobutanoate

4-acetamidobutanal

dimethylsulfoniopropanoate

D-glucurono-6,3-lactone

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetate

5-hydroxyindole acetaldehyde

palmitaldehyde

canavaninosuccinate

O-ureido-L-homoserine

L-arginino-succinate

coproporphyrinogen III

N-(5-phosphoribosyl)-anthranilate

urea-1-carboxylate

urea

7-carboxy-7-deazaguanine

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

3-amino-1-hydroxyacetone 1-phosphate

γ-L-glutamyl 5-phosphate

propane-1,3-diamine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

(Z)-2-methyl-peroxyaminoacrylate

(Z)-2-methylureidoacrylate peracid

(Z)-3-peroxyaminoacrylate

(Z)-3-ureidoacrylate peracid

aminoacrylate

3-ureidoacrylate

O-acetyl-L-serine

(indol-3 yl)acetyl-CoA

α-ribazole

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

3-dehydroshikimate

3-dehydroquinate

5-enolpyruvoyl-shikimate 3-phosphate

lipid A disaccharide (E. coli)

2-C-methyl-D-erythritol 4-phosphate

orotidine 5'-phosphate

lipid IV_A

5-phospho-β-D-ribosylamine

shikimate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

shikimate 3-phosphate

prephenate

carbon monoxide

L-canavanine

preuroporphyrinogen

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

chloroacetaldehyde

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

3-phenylpropanoate

3-(2,3-dihydroxyphenyl)propanoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

acetyl phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

xanthine

N-acetyl-D-muramate 6-phosphate

2,5-didehydro-D-gluconate

5-dehydro-D-gluconate

2-keto-L-gulonate

3-mercaptopyruvate

S-acetyldihydrolipoamide

dihydrolipoamide

α-D-glucosamine 1-phosphate

succinate semialdehyde

4-aminobutanoate

D-erythro-imidazole-glycerol-phosphate

L-selenocystathionine

ε-caprolactone

cyclohexanone

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

phosphonoacetate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

creatinine

7-epicholate

hydrogen selenide

oxalosuccinate

dimethyl sulfoxide

glutathione disulfide

(R)-1-amino-2-propanol O-2-phosphate

dialurate

3-(3-hydroxyphenyl)propanoate

1,4-dihydroxy-2-naphthoate

(R)-4'-phosphopantothenate

vanillin

autoinducer 2

2,3-didehydroadipyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

4-maleyl-acetoacetate

glutathioselenol

selenodiglutathione

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-oxoglutaramate

enol-phenylpyruvate

1,2-dihydro-β-NADP

(3E)-2-oxopent-3-enoate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-chloroacetate

2-iminosuccinate

2-iminobutanoate

2-iminopropanoate

oxygen

hydrogen sulfide

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

Mg-protoporphyrin

protoporphyrin IX

protoporphyrinogen IX

siroheme

protoheme

cob(I)alamin

adenosylcobalamin

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

adenosylcobyrate

hydrogen cyanide

ethylphosphate

phenylacetate

L-homocysteine

4-methylphenol

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

AMP

ATP

ADP

dADP

GDP

dGDP

GTP

ITP

IDP

dITP

dIDP

dGTP

dATP

5'-deoxyadenosine

ppGpp

pppGpp

2'-deoxyinosine

2'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

IMP

GMP

XMP

8-oxo-dGMP

8-oxo-dGTP

2'-deoxyguanosine

1-(5-phospho-β-D-ribosyl)-AMP

dAMP

hypoxanthine

dIMP

XTP

8-oxo-GMP

8-oxo-GTP

isoguanine

preQ₁

adenine

guanine

uracil

dUMP

dTMP

dCMP

dUDP

dCDP

dTDP

dCTP

dUTP

dTTP

UMP

CMP

UDP

CDP

UTP

CTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

(S)-NADPHX

(R)-NADPHX

inosine

adenosine

xanthosine

guanosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

7,8-dihydrolumazine

tetrahydromethanopterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-triphosphate

molybdopterin

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

riboflavin

FMN

FAD

reduced riboflavin

FMNH₂

FADH₂

6,7-dimethyl-8-(1-D-ribityl)lumazine

orotate

(S)-1-pyrroline-5-carboxylate

sirohydrochlorin

precorrin-1

precorrin-2

precorrin-3B

precorrin-3A

glycolaldehyde

salicylaldehyde

phytenal

decanal

dodecanal

(S)-lactaldehyde

acetaldehyde

formaldehyde

1-octanal

D-glyceraldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

methylglyoxal

phenylacetaldehyde

benzaldehyde

(R)-acetoin

menadione

caldariellaquinone

diacetyl

D-gluconate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

2,4-diacetamido-2,4,6-trideoxy-β-L-altropyranose

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

L-fuculose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

glycerol

N-acetyl-β-D-glucosamine

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

α-carotene

zeinoxanthin

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

dioleoyl phosphatidate

1-palmitoyl-2-linoleoyl-phosphatidylcholine

1-linoleoyl-sn-glycero-3-phosphocholine

1-oleoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1,2-dibutyrin

tributyrin

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

16-hydroxypalmitate

18-hydroxystearate

18-hydroxyoleate

1-octanol

ethanol

methanol

myo-inositol

1D-myo-inositol 6-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 1-monophosphate

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

catechol

protocatechuate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylacetate

(R,R)-2,3-butanediol

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

carbamate

L-α-amino-ε-keto-pimelate

L-arginine

L-lysine

L-histidine

L-glutamate

D-glutamate

L-alanine

L-glutamine

L-serine

L-leucine

L-proline

glycine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

L-citrulline

L-methionine

L-aspartate

L-isoleucine

L-tryptophan

L-asparagine

L-valine

L-phenylalanine

L-tyrosine

L-threonine

L-cysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-ornithine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

O-succinyl-L-homoserine

L-canaline

O-phospho-L-homoserine

L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-2,4-diaminobutanoate

L-cystathionine

L-isoglutamine

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-carbamoyl-L-aspartate

iminoarginine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

sarcosine

N-acetyl-L-methionine

N-acetyl-L-glutamate

3-phospho-L-serine

D-alanine

D-cysteine

D-arginine

3-oxoadipate

cis-2-methylaconitate

(2R,3S)-2-methylisocitrate

(2S,3S)-2-methylcitrate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

(3E)-2-oxohex-3-enedioate

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

D-glucarate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

pyruvate

2-oxoglutarate

5-chloro-4-hydroxy-2-oxopentanoate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

trans-cinnamate

vanillate

salicylate

4-aminobenzoate

benzoate

acetate

5-chloro-5-deoxy-D-ribonate

(R)-pantoate

pristanate

palmitate

decanoate

laurate

octanoate

butanoate

stearate

7-hydroxylaurate

phytenate

oleate

(15Z)-tetracosenoate

linoleate

α-linolenate

(2E)-hexadecenoate

(R)-lactate

(S)-lactate

(R)-3-hydroxybutanoate

formate

nicotinamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

acetyl-CoA

succinyl-CoA

3'-dephospho-CoA

malonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

2-methylacetoacetyl-CoA

(2S)-methylsuccinyl-CoA

phenylacetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

trans-feruloyl-CoA

(E)-glutaconyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

methylacrylyl-CoA

isobutanoyl-CoA

(3S)-hydroxyadipyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

16-hydroxypalmitoyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

myristoyl-CoA

stearoyl-CoA

cis-vaccenoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

lauroyl-CoA

hexanoyl-CoA

octanoyl-CoA

decanoyl-CoA

7-hydroxylauroyl-CoA

pristanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

18-hydroxylinoleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

crotonyl-CoA

D-glucono-1,5-lactone

trans-dienelactone

cis-dienelactone

ethene

(indol-3-yl)acetate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

cholest-4-en-3-one

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

3α,7α,12β-trihydroxy-5β-cholan-24-oate

7-oxolithocholate

cholest-5-en-3-one

cholesterol

chenodeoxycholate

cholate

glycocholate

isocholate

3-dehydrocholate

nicotinate

thiamine

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

coenzyme A

preQ₀

4-hydroxybenzoate

2-phenylethylamine

ferulate

2,3-dihydroxy-trans-cinnamate

3-hydroxy-trans-cinnamate

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-7

demethylmenaquinol-6

demethylmenaquinol-8

menaquinol-7

menaquinol-6

menaquinol-8

ubiquinol-8

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

vanillyl mandelate

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

glycine betaine

betaine aldehyde

cadaverine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

3-dimethylsulfoniopropionaldehyde

S-(hydroxymethyl)glutathione

dimethyl sulfide

glutathione

(R)-S-lactoylglutathione

taurine

3-sulfopyruvate

L-cysteate

methanesulfonate

dimethyl sulfone

methanesulfinate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

thiocyanate

methanethiol

S-sulfanylglutathione

Fe³⁺

Fe²⁺

Mg²⁺

ammonium

H⁺

K⁺

selenate

hydrogencarbonate

nitrite

sulfite

molybdate

superoxide

thiosulfate

nitrate

OH^-

selenite

hydrogensulfite

sulfate

chloride

phosphate

diphosphate

triphosphate

nitric oxide

hydroxyl radical

(S)-NADHX

(R)-NADHX

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene