ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C435

bisorganyltrisulfane

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C13702

1-piperideine 6-carboxylate

C9431

1,2-dihydro-β-NADP

C12274

enol-phenylpyruvate

C1271

4-oxoglutaramate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C1010

ammonia

C1553

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

C12313

dimethylmaleate

C1156

6-hydroxynicotinate

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C4674

glutathione disulfide

C12492

1,6-anhydro-N-acetyl-β-muramate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C3253

2,5-dioxopentanoate

C15156

dialurate

C1268

(R)-4'-phosphopantothenate

C12370

2-dehydro-3-deoxy-D-galactonate 6-phosphate

C14924

carboxyphosphate

C12352

(S)-dihydroorotate

C12390

D-erythro-imidazole-glycerol-phosphate

C12125

imidazole acetol-phosphate

C12178

histidinal

C563

4-methyl-3-oxoadipate-enol-lactone

C562

4-methyl-3-oxoadipate

C3314

2-dehydro-3-deoxy-D-galactonate

C11634

tartronate semialdehyde

C2263

4-prenylphlorisobutyrophenone

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C1078

(S)-2-amino-6-oxohexanoate

C1325

4-amino-4-deoxychorismate

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C11760

prephenate

C3888

7-carboxy-7-deazaguanine

C11832

orotidine 5'-phosphate

C1633

(R)-1-aminopropan-2-ol

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C1112

ManNAc-GlcNAc-PP-undecaprenol

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C14074

prenyl diphosphate

C2168

Coα-[α-(5-hydroxybenzimidazolyl)]-Coβ-methylcobamide

C1198

5-dehydro-4-deoxy-D-glucarate

C2580

methylsalicylate

C13627

DNA without lesion

C592

pseudaminate

C10261

ADP-L-glycero-β-D-manno-heptose

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C3684

3-deoxy-α-D-manno-2-octulosonate

C6099

lipid IVA

C949

lipid X

C10794

lipid A disaccharide (E. coli)

C12315

5,6-dimethylbenzimidazole

C1104

acetylene

C12016

(lipoyl)adenylate

C863

carboxyspermidine

C13257

carboxynorspermidine

C11849

norspermidine

C352

2-iminoacetate

C12409

creatinine

C3344

2-dehydro-3-deoxy-D-gluconate

C15056

salicyl alcohol

C12494

N-acetyl-D-muramate 6-phosphate

C1024

aminoacetone

C1231

5-aminolevulinate

C11767

porphobilinogen

C12139

preuroporphyrinogen

C12214

(S)-4-amino-5-oxopentanoate

C11715

quinolinate

C859

31-O-desmethylFK-506

C857

FK-506

C11800

(R)-pantothenate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1265

4-phosphooxy-L-threonine

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C6574

(S)-ureidoglycolate

C7865

urea

C11654

selenophosphate

C14181

2-maleylacetate

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C12488

N-(4-aminobenzoyl)-L-glutamate

C11557

urocanate

C1285

4-imidazolone-5-propanoate

C12096

isochorismate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C1353

3-phosphooxypyruvate

C14218

L-β-lysine

C1431

3-dehydroshikimate

C11723

L-quinate

C11930

N-acetylglutamyl-phosphate

C2191

carbamoyl phosphate

C6614

O-ureido-L-homoserine

C12056

L-arginino-succinate

C932

canavaninosuccinate

C933

L-canavanine

C12218

α-D-glucosamine 1-phosphate

C12230

formamide

C912

chloroacetaldehyde

C3269

(S)-4-hydroxy-2-oxopentanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C1528

2-dehydropantoate

C11539

xanthine

C3850

5-amino-6-(D-ribitylamino)uracil

C13728

7,8-didemethyl-8-hydroxy-5-deazariboflavin

C8938

oxalate

C191

L-selenocystathionine

C13854

hydrogen selenide

C1102

O-acetyl-L-serine

C12162

hydrogen peroxide

C1688

phloretin

C2586

(E)-4-coumaroyl-CoA

C13817

pinocembrin chalcone

C6361

acetoacetate

C11606

thiamine phosphate

C11604

thiamine diphosphate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C927

carbon monoxide

C5558

S-methyl-5'-thioinosine

C12031

S-Inosyl-L-homocysteine

C12848

N5-carboxyaminoimidazole ribonucleotide

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C1184

5-phospho-β-D-ribosylamine

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1196

S-methyl-5'-thioadenosine

C11881

N-methylhydantoin

C3821

5-methylcytosine

C11988

mesaconate

C891

citrate

C14436

pimelate

C13950

pimeloyl-CoA

C1130

8-amino-7-oxononanoate

C14187

6-oxo-1,4,5,6-tetrahydronicotinate

C13429

(S)-2-hydroxymethylglutarate

C13431

(S)-2-formylglutarate

C1491

citraconate

C13793

(2R,3S)-3-methylmalate

C1534

2-methyleneglutarate

C1448

(R)-3-methylitaconate

C13906

(2R,3S)-2,3-dimethylmalate

C939

butanoyl phosphate

C13634

carbon tetrachloride

C285

coenzyme B

C13751

methanophenazine

C283

CoB-CoM heterodisulfide

C12331

dihydromethanophenazine

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C3319

4-methyl-2-oxopentanoate

C12044

L-histidinol phosphate

C12176

histidinol

C6444

oxaloacetate

C12364

isopentenyl diphosphate

C12048

γ-L-glutamyl 5-phosphate

C9422

nicotinate adenine dinucleotide

C12164

H2

C11483

glycolate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11653

shikimate

C11652

shikimate 3-phosphate

C12369

3-dehydroquinate

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C1038

α-ribazole

C1036

α-ribazole 5'-phosphate

C11711

(R)-1-amino-2-propanol O-2-phosphate

C11802

4'-phosphopantetheine

C11754

propanoyl phosphate

C873

coproporphyrinogen III

C11857

β-nicotinate D-ribonucleotide

C1538

2-C-methyl-D-erythritol 4-phosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12192

carbonic acid

C13970

β-D-fructose 2,6-bisphosphate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C928

CO2

C11479

phosphoenolpyruvate

C10349

glycerone phosphate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C1108

acetyl phosphate

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C11543

H2O

C1530

(2R,3S)-3-isopropylmalate

C11480

phenylacetate

C803

ethylphosphate

C3940

carboxyphosphinopyruvate

C4751

3-(hydroxyphosphinoyl)pyruvate

C3869

1-carboxyvinyl carboxyphosphonate

C2255

N2

C9821

cobalt-factor III

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9855

adenosyl-cobinamide phosphate

C9865

Mg-protoporphyrin

C9845

cobalt-sirohydrochlorin

C9799

cobalt-precorrin-2

C9822

cobalt-precorrin-3

C9823

cob(I)yrinate a,c-diamide

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9874

cob(I)alamin

C9813

cobalt-precorrin-5B

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C9842

cobalt-precorrin-6B

C9818

cobalt-precorrin-6A

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9800

adenosylcobyrate

C5221

adenosylcobalamin

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C6624

protoheme

C7676

protoporphyrin IX

C7658

uroporphyrinogen-III

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7666

protoporphyrinogen IX

C7632

siroheme

C7118

hydrogen sulfide

C7121

oxygen

C6596

2-iminosuccinate

C6599

2-iminobutanoate

C6708

2-iminopropanoate

C11281

2-chloroacetate

C8420

sn-glycerol 1-phosphate

C8419

sn-glycerol 3-phosphate

C11476

(R)-glycerate

C6437

3-phospho-D-glyceroyl-phosphate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6755

(R)-citramalate

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6287

2-octaprenylphenol

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C12545

ethene

C7306

5'-deoxy-5'-fluoroadenosine

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C11228

dichlorocarbene

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C5546

5'-chloro-5'-deoxyadenosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C11229

trichloromethyl radical

C10049

FMNH2

C10052

FMN

C10053

FAD

C5392

(S)-NADHX

C5394

(R)-NADHX

C5543

ubiquinol-8

C1867

3-demethylubiquinol-8

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C8965

hydroxyl radical

C8958

superoxide

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C7864

Fe3+

C4320

H+

C4328

ammonium

C11009

Mg2+

C11006

Co2+

C11023

Fe2+

C11019

Ca2+

C7025

OH-

C7062

tetrathionate

C7024

thiosulfate

C7057

molybdate

C7036

hydrogencarbonate

C7022

selenide

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C4606

S-(hydroxymethyl)glutathione

C4678

glutathione

C3998

methanethiol

C4644

S-sulfanylglutathione

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C12587

L-cysteate

C12637

3-sulfopyruvate

C12629

coenzyme M

C2209

(2R)-3-sulfolactate

C7994

(2R)-phospho-3-sulfolactate

C6526

(2Z)-2-aminobut-2-enoate

C6524

2-aminoprop-2-enoate

C3576

cadaverine

C3548

putrescine

C3574

spermidine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1434

D-alanyl-D-alanine

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C7060

3-hexaprenyl-4-hydroxybenzoate

C6934

4-hydroxybenzoate

C2133

6-isobutyl-4-hydroxy-2-pyrone

C3649

benzaldehyde

C2903

hydroquinone

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C6043

4-methylphenol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C15317

2',4,4',6'-tetrahydroxychalcone

C2542

isoliquiritigenin

C11409

2,3-dihydroxybenzoate

C11421

protocatechuate

C2761

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

C5781

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

C5778

dimeric urushiol peroxide

C11429

salicylate

C8974

4-aminobenzoate

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C12718

molybdopterin

C10611

(R)-lipoate

C10614

coenzyme A

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C14624

5,10-methylene-tetrahydromethanopterin

C14603

tetrahydromethanopterin

C6006

adenylyl molybdenum cofactor

C6000

bis(molybdenum cofactor)

C6009

bis(guanylyl molybdopterin) cofactor

C6003

guanylyl molybdenum cofactor

C6007

MoO2-molybdopterin cofactor

C6002

cytidylyl molybdenum cofactor

C10988

riboflavin

C10982

nicotinate

C4208

pyridoxine

C4214

pyridoxine 5'-phosphate

C4200

pyridoxal

C4210

pyridoxal 5'-phosphate

C4216

pyridoxamine

C4188

pyridoxamine 5'-phosphate

C10966

all-trans-retinol

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C10791

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

C10102

cis-dienelactone

C10100

trans-dienelactone

C3727

all-trans-retinyl palmitate

C4933

formyl-CoA

C4907

oxalyl-CoA

C5250

dihydro-4-coumaroyl-CoA

C4920

isovaleryl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5316

(R)-2-hydroxyglutaryl-CoA

C4927

(E)-glutaconyl-CoA

C4922

isobutanoyl-CoA

C4901

succinyl-CoA

C4953

(2S)-ethylmalonyl-CoA

C5061

(2R)-ethylmalonyl-CoA

C5298

acetyl-CoA

C4937

3'-dephospho-CoA

C4913

malonyl-CoA

C5014

phenylacetyl-CoA

C4981

CoA-disulfide

C5920

(R)-methylmalonyl-CoA

C5919

(S)-methylmalonyl-CoA

C11400

phytenoyl-CoA

C11398

(E)-cinnamoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C5635

oleoyl-CoA

C11195

18-hydroxylinoleoyl-CoA

C11187

7-hydroxylauroyl-CoA

C491

18-hydroxyoleoyl-CoA

C480

18-hydroxystearoyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C2873

pristanoyl-CoA

C5637

cis-vaccenoyl-CoA

C5890

myristoyl-CoA

C5651

palmitoleoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C6562

hexadecanedioyl-CoA

C2008

acetoacetyl-CoA

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C3316

(3E)-2-oxohex-3-enedioate

C8950

chorismate

C6442

succinate

C6443

fumarate

C5596

L-aspartate

C2802

(S)-malate

C8928

D-galactarate

C8923

α,ω-9Z-octadecenedioate

C8555

cis-homoaconitate

C8536

3-carboxy-cis,cis-muconate

C8538

(2R)-homocitrate

C6371

3-oxoadipate

C3420

propanoate

C3421

formate

C11517

acetate

C3308

pyruvate

C3418

butanoate

C6185

(R)-lactate

C3412

decanoate

C3409

octanoate

C3415

laurate

C3207

7-hydroxylaurate

C538

18-hydroxyoleate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C13266

(15Z)-tetracosenoate

C10590

α-linolenate

C6379

linoleate

C3387

stearate

C3383

palmitate

C13210

oleate

C13260

phytenate

C3542

1-palmitoyl-2-cis-vaccenoyl phosphatidate

C3119

1,2-dicis-vaccenoyl-phosphatidate

C3512

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

C3514

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

C3510

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

C11481

orotate

C11482

(R)-pantoate

C4985

(S)-1-pyrroline-5-carboxylate

C2137

D-tagaturonate

C2021

aldehydo-D-galacturonate

C5032

carbamate

C5579

L-serine

C11443

creatine

C11444

N-carbamoylsarcosine

C11441

β-alanine

C11435

(R)-β-lysine

C5588

L-leucine

C5581

L-proline

C5609

L-glutamine

C12067

glycine

C5597

L-alanine

C8797

D-glutamate

C5607

L-glutamate

C7597

L-threo-3-phenylserine

C5605

L-histidine

C5584

L-lysine

C5642

L-arginine

C5575

L-tryptophan

C5573

L-tyrosine

C2469

L-phenylalanine

C8807

D-lysine

C8796

D-proline

C12223

D-ornithine

C8812

(3R)-3-methyl-D-ornithine

C8799

D-alanine

C12065

L-saccharopine

C12201

L-2-amino-3-oxobutanoate

C12063

seleno-L-homocysteine

C2449

S-sulfanyl-L-cysteine

C12073

L-aspartyl-4-phosphate

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C3628

sarcosine

C6532

(2S, 3S)-3-methylaspartate

C13322

N-carbamoyl-L-aspartate

C5476

formyl-L-isoglutamine

C5466

N-formimino-L-glutamate

C15000

N-acetyl-L-ornithine

C14976

N-acetyl-L-methionine

C14973

N-acetyl-L-glutamate

C10821

trans-4-hydroxy-L-proline

C11955

O-acetyl-L-homoserine

C5601

L-isoglutamine

C5612

L-cysteine

C5580

L,L-diaminopimelate

C12231

L-ornithine

C5643

L-asparagine

C5595

L-cystathionine

C5603

L-isoleucine

C5571

L-valine

C5577

L-threonine

C5592

L-selenocysteine

C5583

L-methionine

C12303

L-citrulline

C12229

O-phospho-L-homoserine

C12227

O-succinyl-L-homoserine

C12237

L-canaline

C12245

L-homoserine

C12255

L-cystine

C2426

S-sulfo-L-cysteine

C12247

L-homocysteine

C12233

L-glutamate-5-semialdehyde

C12239

L-aspartate 4-semialdehyde

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C5585

meso-diaminopimelate

C9505

L-allo-threonine

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3351

glyoxylate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C11222

sn-glycero-3-phosphoethanolamine

C3450

ethanol

C3448

methanol

C11911

(R,R)-2,3-butanediol

C13573

1D-myo-inositol 3-monophosphate

C8321

geranyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C15301

all-trans-nonaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4545

3-nonaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C4553

3-octaprenyl-4-hydroxybenzoate

C4549

3-heptaprenyl-4-hydroxybenzoate

C5639

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10024

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

C6239

1-myristoyl-sn-glycerol 3-phosphate

C6242

1-cis-vaccenoyl-sn-glycerol-3-phosphate

C6240

1-palmitoyl-sn-glycerol 3-phosphate

C3826

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

C3822

1-palmitoyl-2-myristoyl phosphatidate

C3816

1,2-dimyristoyl-sn-glycerol 3-phosphate

C3117

dioleoyl phosphatidate

C10235

heptosyl-Kdo2-lipid A

C10234

(heptosyl)2-Kdo2-lipid A

C10226

α-Kdo-(2→6)-lipid IVA

C2258

phlorisovalerophenone

C2266

deoxycohumulone

C2261

4-prenylphlorisovalerophenone

C2269

deoxyhumulone

C10688

maltotriose

C10689

maltotetraose

C10690

maltopentaose

C10692

maltoheptaose

C10691

maltohexaose

C8835

β-D-fructofuranose

C2012

keto-D-fructose

C2143

D-xylulose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C9494

D-glyceraldehyde

C11623

2,4-diacetamido-2,4,6-trideoxy-β-L-altropyranose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C10372

a peptidoglycan dimer (S. aureus)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10381

a peptidoglycan dimer (mycobacteria)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10379

a peptidoglycan dimer (E. faeciums)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3126

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C6671

N,N'-diacetylchitobiose 6'-phosphate

C6669

N-monoacetylchitobiose 6'-phosphate

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C7780

UDP-α-D-glucose

C8422

CDP-α-D-glucose

C1939

dTDP-α-D-glucose

C10263

ADP-α-D-glucose

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C8666

UDP-α-D-galactose

C7790

UDP-N-acetyl-α-D-mannosamine

C7722

UDP-α-D-glucuronate

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7822

UDP-N-acetyl-α-D-muramate

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C7720

UDP-α-D-xylose

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C8433

CDP-4-dehydro-6-deoxy-α-D-glucose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1009

GDP-α-D-mannose

C1043

GDP-4-dehydro-α-D-rhamnose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C15289

D-sedoheptulose 7-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10340

D-erythrose 4-phosphate

C10324

D-tagatofuranose 1,6-bisphosphate

C10326

β-D-fructose 1,6-bisphosphate

C10331

salicin 6-phosphate

C10334

arbutin-6-phosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C8699

D-arabinofuranose 5-phosphate

C10604

D-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8669

methyl β-D-glucoside 6-phosphate

C3682

D-galactonate

C3675

D-altronate

C2040

diacetyl

C6090

methylglyoxal

C10061

(S)-acetoin

C10060

(R)-acetoin

C3483

formaldehyde

C3500

acetaldehyde

C2308

precorrin-6A

C2300

precorrin-5

C2320

precorrin-4

C2314

precorrin-3B

C2302

precorrin-3A

C2311

precorrin-2

C2305

precorrin-1

C2317

precorrin-6B

C2323

precorrin-7

C2297

precorrin-8x

C1705

sirohydrochlorin

C2167

Coα-[α-(5-hydroxybenzimidazolyl)]-cobamide

C8755

dCMP

C8772

dCTP

C8764

dTTP

C8720

dTDP

C8760

UTP

C8744

dTMP

C8733

dCDP

C8732

CDP

C8752

dUDP

C8707

cytosine

C8739

uracil

C8714

UDP

C8724

dUTP

C8770

dUMP

C8761

CTP

C6945

5-fluorouracil

C2245

CMP

C2241

UMP

C2702

cytidine

C2706

uridine

C2519

thymidine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C10601

thymine

C7785

hypoxanthine

C9454

adenine

C9455

guanine

C7649

isoguanine

C9540

preQ1

C15094

xanthosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C7755

2'-deoxyinosine

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C7759

ITP

C7745

GTP

C7844

ATP

C7817

IDP

C7795

GDP

C7757

ADP

C7741

IMP

C7811

XMP

C7827

GMP

C7809

AMP

C7749

dITP

C7751

dGTP

C7783

dATP

C7747

dIDP

C7807

dGDP

C7823

dADP

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12702

cyclic pyranopterin phosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12668

molybdopterin adenine dinucleotide

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12726

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

C12676

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

C10609

7,8-dihydropteroate

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C10288

adenylo-succinate

C10267

pppGpp

C10266

ppGpp

C5552

5'-deoxyadenosine

C9773

5-fluorocytosine

C9419

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

C9420

two adjacent thymidines in DNA

C1817

cyclic di-3',5'-guanylate

C10284

2-hydroxy-dATP

C10290

5-hydroxy-CTP

C10280

5-hydroxy-CMP

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C10799

DNA with lesion