an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
2-maleylacetate
phosphocholine
N-succinyl-L,L-2,6-diaminopimelate
N-succinyl-2-amino-6-ketopimelate
(S)-2,3,4,5-tetrahydrodipicolinate
lipid A disaccharide (E. coli)
(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate
(R)-pantothenate
butyramide
D-erythro-imidazole-glycerol-phosphate
2-phosphoglycolate
D-galactosamine-6-phosphate
N-acetyl-D-galactosamine 6-phosphate
(R)-4'-phosphopantothenate
N2-succinyl-L-glutamate 5-semialdehyde
hydroxylamine
ammonia
L-selenocystathionine
histidinal
dethiobiotin
8-amino-7-oxononanoate
pimeloyl-CoA
7,8-diaminopelargonate
(R)-4'-phosphopantothenoyl-L-cysteine
hydrogen selenide
α-ribazole 5'-phosphate
5,6-dimethylbenzimidazole
pyruvic oxime
autoinducer 2
homogentisate
4-maleyl-acetoacetate
2-amino-3-carboxymuconate-6-semialdehyde
(R)-mevalonate
2-hydroxy-5-carboxymethylmuconate semialdehyde
(4S)-4-hydroxy-2-oxoheptanedioate
(4Z)-2-oxohept-4-enedioate
(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate
N-ethylammelide
glutathioselenol
selenodiglutathione
2-keto-L-gulonate
4-(γ-L-glutamylamino)butanal
D-glycero-β-D-manno-heptose 1,7-bisphosphate
oxamate
maleamate
L-dehydro-ascorbate
dehydroascorbate (bicyclic form)
3-keto-L-gulonate 6-phosphate
5-aminopentanoate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
1,2-dihydro-β-NADP
cyclic-2,3-O-oxalyl-L-threonate
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
enol-phenylpyruvate
2-carboxy-L-xylonolactone
1-piperideine-2-carboxylate
2-carboxy-L-threo-pentonate
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
cyclic- 3,4-O-oxalyl-L-threonate
bisorganyltrisulfane
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
4-guanidinobutanoate
4-guanidinobutyramide
H2O
acrylate
acrylamide
(indol-3-yl)acetamide
propionamide
N-acetylglutamyl-phosphate
N-acetyl-L-glutamate 5-semialdehyde
succinate semialdehyde
4-aminobutanoate
3-oxopropanoate
canavaninosuccinate
O-ureido-L-homoserine
L-arginino-succinate
5-dehydro-4-deoxy-D-glucarate
2,3-dioxo-L-gulonate
3-keto-L-gulonate
CO2
coproporphyrinogen III
(2R,3S)-3-isopropylmalate
2-isopropylmaleate
(2S)-2-isopropylmalate
S-formylglutathione
3-mercaptopyruvate
hydroxypyruvate
5-enolpyruvoyl-shikimate 3-phosphate
shikimate 3-phosphate
phosphoenolpyruvate
prephenate
glycerone phosphate
xanthine
citrate
S-ribosyl-L-homocysteine
β-D-ribosylnicotinate
β-nicotinate D-ribonucleotide
carbamoyl phosphate
α-D-glucosamine 1-phosphate
5-aminolevulinate
(S)-4-amino-5-oxopentanoate
oxaloacetate
(E)-4-coumaroyl-CoA
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
2,3-didehydroadipyl-CoA
2-dehydro-3-deoxy-D-gluconate
6-phospho D-glucono-1,5-lactone
3-ureidopropanoate
5-methylcytosine
3-deoxy-D-manno-octulosonate 8-phosphate
2-dehydro-3-deoxy-D-gluconate 6-phosphate
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
oxalosuccinate
D-gluconate 6-phosphate
glycolate
N1-(5-phospho-β-D-ribosyl)glycinamide
5-phospho-β-D-ribosylamine
S-adenosyl 3-(methylsulfanyl)propylamine
3-methyl-2-oxobutanoate
(S)-3-methyl-2-oxopentanoate
(R)-2,3-dihydroxy-3-methylpentanoate
1-deoxy-L-glycero-tetrulose 4-phosphate
5-(methylsulfanyl)-ribulose 1-phosphate
S-methyl-5-thio-α-D-ribose 1-phosphate
5-(methylsulfanyl)-α-D-ribose
2-oxovalerate
3-ethylmalate
4-methyl-2-oxopentanoate
(2S)-2-isopropyl-3-oxosuccinate
(S)-2-acetolactate
(S)-2-aceto-2-hydroxybutanoate
nicotinate adenine dinucleotide
γ-L-glutamyl 5-phosphate
3-deoxy-D-arabino-heptulosonate 7-phosphate
acetyl phosphate
shikimate
2-dehydropantoate
carboxyphosphate
L-histidinol phosphate
imidazole acetol-phosphate
anthranilate
N-(5-phosphoribosyl)-anthranilate
3-deoxy-α-D-manno-2-octulosonate
hydrogen peroxide
3-dehydroshikimate
hydrogenobyrinate
5-dehydro-D-gluconate
4-amino-4-deoxychorismate
L-canavanine
N-formylmaleamate
2,5-dihydroxypyridine
6-hydroxynicotinate
(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate
isochorismate
(lipoyl)adenylate
quinolinate
N-carbamoyl-2-oxoglycine
(S)-ureidoglycolate
tartronate semialdehyde
6-amino-2-oxohexanoate
2-aminoacetaldehyde
carbon monoxide
2-protocatechuoylphloroglucinolcarboxylate
urea
2,5-dioxopentanoate
histidinol
ADP-L-glycero-β-D-manno-heptose
ADP-D-glycero-β-D-manno-heptose
4-hydroxy-2-nonenal
D-glycero-β-D-manno-heptose 1-phosphate
lipid IVA
(S)-dihydroorotate
methyl-1,4-benzoquinol
2-methyl-1,4-benzoquinone
3-dehydroquinate
3-phosphooxypyruvate
(4-hydroxyphenyl)acetate
isopentenyl diphosphate
γ-glutamyl-L-putrescine
4-(γ-L-glutamylamino)butanoate
(2R,3S)-3-methylmalate
citraconate
DNA without lesion
carbonic acid
glutathione disulfide
(2S)-4-acetamido-2-aminobutanoate
ectoine
orotidine 5'-phosphate
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
5-amino-6-(D-ribitylamino)uracil
N2-succinylglutamate
lipid X
7-carboxy-7-deazaguanine
selenophosphate
2,5-didehydro-D-gluconate
2-keto-D-gluconate
acetoacetate
4-fumaryl-acetoacetate
2-dehydro-3-deoxy-D-galactonate 6-phosphate
2-dehydro-3-deoxy-D-galactonate
N,N-dimethylaniline-N-oxide
N,N-dimethylaniline
ethanolamine
O-acetyl-L-serine
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate
thiamine phosphate
4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine
N2-succinyl-L-ornithine
N2-succinyl-L-arginine
prenyl diphosphate
adenosine 5'-phosphoselenate
adenosine 5'-phosphosulfate
urea-1-carboxylate
4'-phosphopantetheine
formamide
2-oxoadipate
N-ethylammeline
deethylsimazine
(2S)-2-amino-3-oxo-4-phosphooxybutanoate
3-amino-1-hydroxyacetone 1-phosphate
4-phosphooxy-L-threonine
2-iminoacetate
dihydroxyacetone
preuroporphyrinogen
porphobilinogen
2-hydroxy-3-oxosuccinate
meso-tartrate
L-tartrate
N5-carboxyaminoimidazole ribonucleotide
5-carboxymethyl-2-hydroxymuconate
N-acetyl-D-muramate 6-phosphate
1,6-anhydro-N-acetyl-β-muramate
2'-hydroxypseudobaptigenin
(3R)-sophorol
2-hydroxyformononetin
(R)-mevalonate diphosphate
(R)-5-phosphomevalonate
S-methyl-5'-thioadenosine
thiamine diphosphate
(S)-5-amino-3-oxohexanoate
(4,5-dihydro-5-oxofuran-2-yl)-acetate
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
4-methyl-3-oxoadipate
L-gulono-1,4-lactone
ε-caprolactone
cyclohexanone
(1R,2S)-cyclohexa-3,5-diene-1,2-diol
cis,cis-muconate
muconolactone
4-methyl-3-oxoadipate-enol-lactone
3-methylmuconolactone
(+)-muconolactone
(indol-3-yl)pyruvate
hydrogenobyrinate a,c-diamide
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
L-cysteinylglycine
γ-L-glutamyl-L-cysteine
D-alanyl-D-alanine
L-alanyl-γ-D-glutamyl-meso-diaminopimelate
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
hypoglycin B
L-α-amino-ε-keto-pimelate
carbamate
L-2-aminoadipate
L-citrulline
L-histidine
L-cysteine
L-methionine
L-glutamate
L-aspartate
L-threonine
glycine
L-alanine
L-glutamine
L-phenylalanine
L-lysine
L-tryptophan
L-serine
L-proline
L-arginine
L-tyrosine
L-leucine
L-asparagine
L-valine
L-isoleucine
L-ornithine
L-aspartate 4-semialdehyde
S-adenosyl-L-homocysteine
S-adenosyl-L-methionine
1-aminocyclopropane-1-carboxylate
O-phospho-L-homoserine
L-homoserine
L-glutamate-5-semialdehyde
L-canaline
3-sulfino-L-alanine
hypoglycin A
L-homocysteine
O-succinyl-L-homoserine
S-(4-hydroxy-nonenal-3-yl)-L-cysteine
meso-diaminopimelate
seleno-L-homocysteine
L-aspartyl-4-phosphate
O-acetyl-L-homoserine
trans-4-hydroxy-L-proline
cis-4-hydroxy-D-proline
N-carbamoylglycine
N-acetyl-L-ornithine
N-acetyl-L-citrulline
N-acetyl-L-glutamate
N-acetyl-L-methionine
N-carbamoyl-L-aspartate
3-phospho-L-serine
L-cystathionine
L-2,4-diaminobutanoate
L,L-diaminopimelate
D-glutamate
D-alanine
D-lysine
β-alanine
(S)-3-amino-2-methylpropanoate
(R)-3-amino-2-methylpropanoate
2,3-dihydroxybenzoate
protocatechuate
4-aminobenzoate
benzoate
acetate
(R)-pantoate
D-mannonate
D-gluconate
allantoate
orotate
5-chloro-5-deoxy-D-ribonate
(S)-1-pyrroline-5-carboxylate
pristanate
7-hydroxylaurate
laurate
octanoate
decanoate
stearate
palmitate
18-hydroxystearate
16-hydroxypalmitate
18-hydroxyoleate
phytenate
oleate
(15Z)-tetracosenoate
linoleate
α-linolenate
(2R,3S)-2-methylisocitrate
(R)-lactate
(S)-lactate
(R)-glycerate
(R)-3-hydroxybutanoate
pyruvate
formate
propanoate
2-hydroxy-4-oxobutane-1,2,4-tricarboxylate
(3E,5R)-5-carboxy-2-oxohept-3-enedioate
2-oxoglutarate
2-oxobutanoate
glyoxylate
5-chloro-4-hydroxy-2-oxopentanoate
4-(methylsulfanyl)-2-oxobutanoate
(R)-4-hydroxy-4-methyl-2-oxoglutarate
3-(4-hydroxyphenyl)pyruvate
3-phenyl-2-oxopropanoate
3-oxoadipate
cis-aconitate
cis-2-methylaconitate
(2S,3S)-2-methylcitrate
3-carboxy-cis,cis-muconate
D-threo-isocitrate
3-(carbamoylamino)-2-methylpropanoate
chorismate
D-glucarate
α,ω-9Z-octadecenedioate
maleate
fumarate
succinate
(S)-malate
nicotinamide
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
5-amino-4-imidazolecarboxyamide
(S)-(+)-allantoin
acetamide
(heptosyl)2-Kdo2-lipid A
heptosyl-Kdo2-lipid A
4-O-phospho-α-Kdo8N-(2→6)-lipid IVA
α-Kdo8N-(2→6)-lipid IVA
4-O-phospho-α-Kdo-(2→6)-lipid IVA
α-Kdo-(2→6)-lipid IVA
3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine
3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine
(2E,6E)-farnesyl diphosphate
trans,octacis-decaprenyl phosphate
geranyl diphosphate
3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol
dimeric urushiol peroxide
(3Z,5E)-dodeca-3,5-dienoyl-CoA
5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA
2-trans-nonenoyl-CoA
4-trans-3-oxo-undecenoyl-CoA
4-cis-undecenoyl-CoA
6-cis, 3-oxo-tridecenoyl-CoA
(3E)-dec-3-enoyl-CoA
(5E)-3-oxo-dodec-5-enoyl-CoA
4-trans-undecenoyl-CoA
6-trans-3-oxo-tridecenoyl-CoA
3-heptaprenyl-4-hydroxybenzoate
3-nonaprenyl-4-hydroxybenzoate
3-octaprenyl-4-hydroxybenzoate
3-decaprenyl-4-hydroxybenzoate
3-hexaprenyl-4-hydroxybenzoate
di-trans,octa-cis-undecaprenyl phosphate
di-trans,octa-cis-undecaprenyl diphosphate
all-trans-heptaprenyl diphosphate
all-trans-nonaprenyl diphosphate
all-trans-octaprenyl diphosphate
all-trans-decaprenyl diphosphate
all-trans-hexaprenyl diphosphate
1-oleoyl-2-palmitoyl-phosphatidylglycerol
phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)
L-idonate
D-galactonate
L-gulonate
1-(β-D ribofuranosyl)nicotinamide
decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide
dTDP-4-dehydro-6-deoxy-α-D-glucopyranose
ADP-α-D-glucose
GDP-α-D-mannose
GDP-α-D-glucose
dTDP-4-dehydro-β-L-rhamnose
dTDP-β-L-rhamnose
dTDP-α-D-glucose
UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine
UDP-α-D-galactofuranose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-muramate
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-α-D-glucuronate
UDP-α-D-glucose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine
UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine
UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine
UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
UDP-α-D-galactose
UDP-N-acetyl-α-D-glucosamine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
CMP-3-deoxy-β-D-manno-octulosonate
5-phospho-α-D-ribose 1-diphosphate
D-sedoheptulose 7-phosphate
D-erythrose 4-phosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
α-D-mannose 1-phosphate
α-D-glucopyranose 1-phosphate
N-acetyl-α-D-glucosamine 1-phosphate
β-D-fructofuranose 1-phosphate
β-D-glucopyranose 1-phosphate
D-fructose 6-phosphate
β-D-fructofuranose 6-phosphate
β-D-fructose 1,6-bisphosphate
α-D-glucose 6-phosphate
α-D-ribose-1-phosphate
5-fluoro-5-deoxy-D-ribose 1-phosphate
2-deoxy-α-D-ribose 1-phosphate
L-xylulose 5-phosphate
1-deoxy-D-xylulose 5-phosphate
D-xylulose 5-phosphate
D-arabinofuranose 5-phosphate
aldehydo-D-ribose 5-phosphate
β-D-ribose 5-phosphate
α-D-ribose 5-phosphate
L-ribulose 5-phosphate
D-ribulose 5-phosphate
D-glyceraldehyde 3-phosphate
α,α-trehalose 6-phosphate
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
D-ribulose-1,5-bisphosphate
a peptidoglycan dimer (E. faecium, tetrapeptide)
a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide
a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide
a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)
a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)
a mature peptidoglycan(n) (meso-DAP containing)
a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide
decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
a peptidoglycan dimer (S. aureus)
a peptidoglycan dimer (E. faeciums)
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)
a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-link (S. aureus)
a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)
β-L-rhamnopyranose
α-L-rhamnopyranose
β-D-fructofuranose
β-D-galactopyranose
α-D-galactopyranose
β-D-glucopyranose
α-D-glucopyranose
D-glyceraldehyde
α-D-ribofuranose
glycolaldehyde
keto-D-fructose
D-xylulose
N-acetylmuramate
N-acetyl-α-D-muramoyl-L-alanine(1-)
N-acetyl-β-D-glucosamine
glycerol
D-mannitol
α,α-trehalose
maltotetraose
maltohexaose
maltoheptaose
maltotriose
maltopentaose
glycine betaine
FMN
FMNH2
FAD
FADH2
caldariellaquinol
3-demethylubiquinol-8
demethylmenaquinol-8
menaquinol-8
ubiquinol-8
caldariellaquinone
NADP+
NAD+
NADPH
NADH
(S)-NADHX
(R)-NADHX
3,5-cyclohexadiene-1,2-diol-1-carboxylate
8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol
catechol
3,4-dihydroxyphenylacetate
myo-inositol
1D-myo-inositol 3-monophosphate
1D-myo-inositol 5-monophosphate
1D-myo-inositol 6-monophosphate
1D-myo-inositol 2-monophosphate
1D-myo-inositol 1-monophosphate
1D-myo-inositol 4-monophosphate
ethanol
methanol
3-(N-morpholino)propanal
methylglyoxal
benzaldehyde
acetaldehyde
butan-1-al
formaldehyde
(R)-acetoin
(S)-acetoin
menadione
diacetyl
nicotinate
L-ascorbate
thiamine
riboflavin
pyridoxal 5'-phosphate
pyridoxine 5'-phosphate
pyridoxamine 5'-phosphate
pyridoxamine
tetrahydromethanopterin
5,10-methylene-tetrahydromethanopterin
7,8-dihydrofolate monoglutamate
tetrahydropteroyl tri-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
urate
4-hydroxybenzoate
benzene
menadiol
all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol
2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol
6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol
6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol
quercetin
4-methylphenol
phenylacetonitrile
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
7,8-dihydrolumazine
6-carboxy-5,6,7,8-tetrahydropterin
molybdopterin adenine dinucleotide
cyclic pyranopterin phosphate
molybdopterin
7,8-dihydroneopterin 3'-phosphate
7,8-dihydroneopterin 3'-triphosphate
(7,8-dihydropterin-6-yl)methyl diphosphate
[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate
2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin
6-(hydroxymethyl)-7,8-dihydropterin
7,8-dihydromonapterin
7,8-dihydroneopterin
7,8-dihydropterin
7,8-dihydropteroate
MoO2-molybdopterin cofactor
reduced riboflavin
6,7-dimethyl-8-(1-D-ribityl)lumazine
(3R)-vestitone
adenine
guanine
xanthosine
inosine
adenosine
guanosine
2'-deoxyadenosine
2'-deoxyguanosine
2'-deoxyinosine
AMP
GMP
XMP
IMP
ATP
GTP
ITP
ADP
GDP
IDP
dGDP
dADP
dIDP
dGTP
dATP
dITP
dAMP
dGMP
hypoxanthine
uracil
thymine
cytosine
preQ1
isoguanine
UDP
dUTP
dCTP
UTP
CTP
5,6-dihydrouracil
5,6-dihydrothymine
CDP
dCDP
dUDP
dTTP
dTDP
dUMP
dCMP
dTMP
UMP
CMP
uridine
cytidine
thymidine
2'-deoxyuridine
2'-deoxycytidine
5-fluorouracil
hydantoin
cob(I)alamin
adenosylcobalamin
cobyrinate
precorrin-7
precorrin-6B
cobalt-precorrin-6A
cobalt-precorrin-6B
precorrin-4
precorrin-3B
precorrin-3A
precorrin-2
precorrin-8x
precorrin-6A
precorrin-5
ethene
(indol-3-yl)acetate
(+)-7-epi-jasmonate
3,22-dioxochol-4-en-24-oyl-CoA
3-oxo-4-pregnene-20-carboxyl-CoA
isobutanoyl-CoA
2-methylbutanoyl-CoA
acetyl-CoA
2-methylacetoacetyl-CoA
methylacrylyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
(E)-2-methylcrotonoyl-CoA
3-hydroxyisovaleryl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA
(3S)-hydroxyadipyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
malonyl-CoA
linoleoyl-CoA
α-linolenoyl-CoA
succinyl-CoA
4-hydroxybenzoyl-CoA
3'-dephospho-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
(+)-7-epi-jasmonoyl-CoA
(S)-3-aminobutanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
(S)-3-hydroxy-isobutanoyl-CoA
ω-carboxy-(9Z)-octadec-9-enoyl-CoA
oleoyl-CoA
3-oxoadipyl-CoA
4-methyl-3-oxoadipyl-CoA
3-oxo-palmitoyl-CoA
3-oxo-myristoyl-CoA
3-oxo-(5Z)-tetradecenoyl-CoA
(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA
(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA
acetoacetyl-CoA
3-oxopentanoyl-CoA
3-oxohexanoyl-CoA
3-oxodecanoyl-CoA
3-oxooctanoyl-CoA
3-oxododecanoyl-CoA
16-hydroxypalmitoyl-CoA
(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA
myristoyl-CoA
stearoyl-CoA
palmitoyl-CoA
18-hydroxystearoyl-CoA
18-hydroxyoleoyl-CoA
pristanoyl-CoA
7-hydroxylauroyl-CoA
lauroyl-CoA
octanoyl-CoA
decanoyl-CoA
hexanoyl-CoA
propanoyl-CoA
butanoyl-CoA
(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA
(Z)-15-tetracosenoyl-CoA
(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA
(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA
(3Z)-dodec-3-enoyl-CoA
phytenoyl-CoA
(2E)-oct-2-enoyl-CoA
(2E)-dec-2-enoyl-CoA
(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA
crotonyl-CoA
D-glucono-1,5-lactone
trans-dienelactone
cis-dienelactone
D-galactono-1,4-lactone
coenzyme A
(R)-lipoate
8-oxo-GTP
8-oxo-dGTP
5-chloro-5-deoxyribose 1-phosphate
5'-chloro-5'-deoxyadenosine
adenylo-succinate
5'-deoxyadenosine
pppGpp
ppGpp
1-(5-phospho-β-D-ribosyl)-ATP
1-(5-phospho-β-D-ribosyl)-AMP
cyclic di-3',5'-guanylate
2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA
2-sulfanyl-N6-dimethylallyladenosine37 in tRNA
β-nicotinamide D-ribonucleotide
5-hydroxy-CMP
5-hydroxy-CTP
2-hydroxy-dATP
P1,P4-bis(5'-adenosyl) tetraphosphate
5'-deoxy-5'-fluoroadenosine
5-fluorocytosine
S-(hydroxymethyl)glutathione
glutathione
(R)-S-lactoylglutathione
3-sulfopyruvate
L-cysteate
taurine
sulfoacetaldehyde
isethionate
1-butanesulfonate
3-(N-morpholino)propanesulfonate
2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate
2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
4-methyl-5-(2-phosphooxyethyl)thiazole
methanethiol
thiocyanate
S-sulfanylglutathione
choline sulfate
choline
betaine aldehyde
betaine aldehyde hydrate
agmatine
putrescine
spermidine
N-acetylputrescine
(2Z)-2-aminobut-2-enoate
2-aminoprop-2-enoate
2-iminopropanoate
glycerophosphoserine
glycerophosphoglycerol
sn-glycero-3-phosphoethanolamine
hydroxyl radical
monodehydroascorbate radical
superoxide
molybdate
selenide
selenite
OH-
hydrogensulfite
sulfate
nitrate
sulfite
hydrogencarbonate
nitrite
thiosulfate
selenate
chloride
phosphonate
phosphate
diphosphate
triphosphate
Fe3+
Mn2+
Zn2+
Mo2+
Fe2+
ammonium
H+
2-chloroacetate
2,4-dinitrophenyl-S-glutathione
1-chloro-2,4-dinitrobenzene
propionitrile
3-cyanopyridine
hydrogen cyanide
preQ0
(indole-3-yl)acetonitrile
acrylonitrile
n-butyronitrile
2-methoxy-6-(all-trans-octaprenyl)phenol
2-octaprenylphenol
(S)-3-hydroxy-isobutanoate
3-(all-trans-octaprenyl)benzene-1,2-diol
(R)-methylmalonate-semialdehyde
(S)-methylmalonate-semialdehyde
(R)-citramalate
(S)-ureidoglycine
S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine
α-D-glucosamine 6-phosphate
(2R)-2,3-dihydroxy-3-methylbutanoate
3-phospho-D-glyceroyl-phosphate
2-phospho-D-glycerate
3-phospho-D-glycerate
sn-glycerol 3-phosphate
2-iminobutanoate
2-iminosuccinate
oxygen
hydrogen sulfide
uroporphyrinogen-III
coproporphyrinogen I
uroporphyrinogen-I
protoporphyrin IX
protoporphyrinogen IX
protoheme
adenosylcobinamide-GDP
adenosylcobalamin 5'-phosphate
adenosylcobinamide
cob(I)inamide
adenosyl-cob(III)yrinate a,c-diamide
cob(I)yrinate a,c-diamide
adenosylcobyrate
cob(II)yrinate a,c-diamide
cob(II)yrinate c-monoamide
adenosyl-cobinamide phosphate
ethylphosphate
(Z)-phenylacetaldehyde oxime
DNA with lesion
(glutathion-S-yl)-4-hydroxy-2-nonenal