an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

(3E)-2-oxopent-3-enoate

1,2-dihydro-β-NADP

enol-phenylpyruvate

5-aminopentanoate

4-oxoglutaramate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine-2-carboxylate

(2E)-2-hydroxypenta-2,4-dienoate

4-oxalocrotonate

1-pyrroline

ammonia

N-carbamoyl-2-oxoglycine

oxamate

selenodiglutathione

glutathioselenol

2-dehydro-3-deoxy-D-gluconate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

3-(2,3-dihydroxyphenyl)propanoate

3-(3-hydroxyphenyl)propanoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

mercuriphenyl acetate

hydrogen selenide

S-ribosyl-L-homocysteine

autoinducer 2

4-(γ-L-glutamylamino)butanal

N-ethylammelide

dialurate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-amino-3-carboxymuconate-6-semialdehyde

5-amino-6-(5-phospho-D-ribitylamino)uracil

D-glycero-β-D-manno-heptose 1,7-bisphosphate

3-phosphooxypyruvate

D-erythro-imidazole-glycerol-phosphate

ADP-L-glycero-β-D-manno-heptose

pimeloyl-CoA

8-amino-7-oxononanoate

7,8-diaminopelargonate

dethiobiotin

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N-acetyl-D-muramate 6-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

thiamine diphosphate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

chloroacetaldehyde

(lipoyl)adenylate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

3-amino-1-hydroxyacetone 1-phosphate

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

2-phosphoglycolate

deethylsimazine

N-ethylammeline

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

propanoyl phosphate

citraconate

(2R,3S)-3-methylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

1,6-anhydro-N-acetyl-β-muramate

ethanolamine

β-D-ribosylnicotinate

adenosine 3',5'-bisphosphate

3'-phosphoadenylyl-sulfate

carboxynorspermidine

norspermidine

(S)-2-amino-6-oxohexanoate

methylsalicylate

salicyl alcohol

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

2,4'-dihydroxyacetophenone

2-aminoacetaldehyde

4-(γ-L-glutamylamino)butanoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2-protocatechuoylphloroglucinolcarboxylate

6-amino-2-oxohexanoate

2,5-dioxopentanoate

L-selenocystathionine

6-chlorohydroxyquinol

4-hydroxybenzaldehyde

DNA without lesion

glutathione disulfide

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

5-oxo-L-proline

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

hydrogenobyrinate a,c-diamide

4-methyl-2-oxopentanoate

5-amino-6-(D-ribitylamino)uracil

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

(indol-3-yl)pyruvate

4-methyl-3-oxoadipate

3-phenylpropanoate

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

urea-1-carboxylate

5-carboxymethyl-2-hydroxymuconate

7-carboxy-7-deazaguanine

lipid X

lipid A disaccharide (E. coli)

(S)-2,3,4,5-tetrahydrodipicolinate

propane-1,3-diamine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

D-gluconate 6-phosphate

carbon monoxide

O-ureido-L-homoserine

(S)-2,3-dihydrodipicolinate

3-deoxy-α-D-manno-2-octulosonate

O-acetyl-L-serine

selenophosphate

4-fumaryl-acetoacetate

2-maleylacetate

quinolinate

acetyl phosphate

(S)-4-amino-5-oxopentanoate

carbonic acid

(2-hydroxyphenyl)acetate

hydrogenobyrinate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

lipid IV_A

D-glycero-β-D-manno-heptose 1-phosphate

ADP-D-glycero-β-D-manno-heptose

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

2-iminoacetate

3-mercaptopyruvate

coniferaldehyde

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

L-arginino-succinate

canavaninosuccinate

L-canavanine

4-hydroxy-2-nonenal

xanthine

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

γ-glutamyl-L-putrescine

N⁵-carboxyaminoimidazole ribonucleotide

(4,5-dihydro-5-oxofuran-2-yl)-acetate

3-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

muconolactone

(+)-muconolactone

cis,cis-muconate

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

3-oxopropanoate

N-carbamoylputrescine

anthranilate

(R)-pantothenate

(R)-4'-phosphopantothenate

1-deoxy-L-glycero-tetrulose 4-phosphate

carboxyphosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

isopentenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

glycolate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

hydrogen peroxide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(R)-1-amino-2-propanol O-2-phosphate

prephenate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

N-(5-phosphoribosyl)-anthranilate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

2-dehydropantoate

4-amino-4-deoxychorismate

acrylamide

acrylate

propionamide

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

formamide

histidinal

histidinol

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

3-deoxy-D-arabino-heptulosonate 7-phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

3-dehydroquinate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

succinate semialdehyde

5-methylcytosine

oxalosuccinate

acetoacetate

urea

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

citrate

(S)-ureidoglycolate

tartronate semialdehyde

N-acetyl-L-glutamate 5-semialdehyde

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

S-formylglutathione

2-C-methyl-D-erythritol 4-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

4-aminobutanoate

(2S)-2-isopropylmalate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

phosphoenolpyruvate

homogentisate

4-maleyl-acetoacetate

hydroxypyruvate

γ-L-glutamyl 5-phosphate

shikimate

3-dehydroshikimate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

prenyl diphosphate

glycerone phosphate

carbamoyl phosphate

(S)-dihydroorotate

4-imidazolone-5-propanoate

urocanate

coproporphyrinogen III

3-methyl-2-oxobutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

5-aminolevulinate

porphobilinogen

preuroporphyrinogen

N-acetylglutamyl-phosphate

orotidine 5'-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

oxaloacetate

6-phospho D-glucono-1,5-lactone

CO₂

α-D-glucosamine 1-phosphate

H₂O

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

cob(I)inamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

adenosylcobinamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-6A

Mg-protoporphyrin

protoheme

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

siroheme

Hg⁰

hydrogen sulfide

oxygen

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-2-hydroxyglutarate

ethene

2-chloromaleylacetate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

2,4,6-trichlorophenol

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

FAD

FADH₂

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

caldariellaquinol

ubiquinol-8

3-demethylubiquinol-8

caldariellaquinone

NADPH

NADH

NADP⁺

NAD⁺

glycine betaine

N,N-dimethylglycine

hydroxyl radical

superoxide

(2E,6E)-farnesyl diphosphate

pristanate

Fe³⁺

ammonium

K⁺

H⁺

Co²⁺

Hg²⁺

Fe²⁺

Mg²⁺

sulfate

hydrogensulfite

selenite

molybdate

OH^-

selenide

thiosulfate

sulfite

selenate

hydrogencarbonate

phosphate

triphosphate

diphosphate

chloride

S-(hydroxymethyl)glutathione

thiocyanate

glutathione

methanethiol

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

taurine

1-butanesulfonate

3-(N-morpholino)propanesulfonate

isethionate

dodecyl sulfate

3-sulfocatechol

(R)-S-lactoylglutathione

3-sulfino-L-alanine

betaine aldehyde

choline

betaine aldehyde hydrate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

4-aminobutanal

N-acetylputrescine

cadaverine

spermidine

putrescine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

7,8-dihydro-8-oxoguanine

urate

3-hexaprenyl-4-hydroxybenzoate

benzene

4-hydroxybenzoate

benzaldehyde

2,6-dichlorohydroquinone

menadiol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

phenol

4-hydroxybenzyl alcohol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

3-hydroxy-trans-cinnamate

2,3-dihydroxy-trans-cinnamate

ferulate

quercetin

2,3-dihydroxybenzoate

4-methylcatechol

3-methylcatechol

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

protocatechuate

catechol

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

salicylate

trans-cinnamate

benzoate

4-aminobenzoate

acrylonitrile

(indole-3-yl)acetonitrile

preQ₀

molybdopterin

(R)-lipoate

coenzyme A

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

thiamine

nicotinamide

riboflavin

nicotinate

pyridoxal

pyridoxal 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

all-trans-retinol

menadione

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

cis-dienelactone

trans-dienelactone

all-trans-retinyl palmitate

2-methylbutanoyl-CoA

phenylacetyl-CoA

dihomo γ-linolenoyl-CoA

3-methylglutaconyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

isobutanoyl-CoA

3'-dephospho-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

malonyl-CoA

acetyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dodec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

phytanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

7-hydroxylauroyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxytetradecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

myristoyl-CoA

palmitoyl-CoA

stearoyl-CoA

icosanoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

allantoate

acetamide

6-aminopenicillanate

isopenicillin N

penicillin G

(S)-(+)-allantoin

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

(3E)-2-oxohex-3-enedioate

chorismate

succinate

L-aspartate

fumarate

(S)-malate

α,ω-9Z-octadecenedioate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(2R,3S)-2-methylisocitrate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-oxoadipate

pyruvate

acetate

formate

propanoate

(R)-lactate

7-hydroxylaurate

decanoate

laurate

octanoate

(R)-3-hydroxybutanoate

16-hydroxypalmitate

18-hydroxystearate

18-hydroxyoleate

(15Z)-tetracosenoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

myristate

arachidate

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

oleate

palmitate

stearate

linoleate

α-linolenate

di-homo-γ-linolenate

phytenate

D-gluconate

(R)-pantoate

orotate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-erythro-hex-4-enopyranuronate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

carbamate

D-serine

L-serine

β-alanine

(S)-3-amino-2-methylpropanoate

L-leucine

L-proline

glycine

L-alanine

L-glutamine

D-glutamate

L-glutamate

L-lysine

L-arginine

L-histidine

L-tryptophan

L-phenylalanine

L-tyrosine

cis-4-hydroxy-D-proline

D-lysine

D-alanine

L-saccharopine

seleno-L-homocysteine

S-sulfanyl-L-cysteine

L-aspartyl-4-phosphate

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

L-proline betaine

D-proline betaine

N-methyl-L-proline

O-acetyl-L-homoserine

L-methionine

L-cysteine

L-isoglutamine

L-isoleucine

L-2,4-diaminobutanoate

L-valine

L-cystathionine

L,L-diaminopimelate

L-asparagine

L-threonine

L-ornithine

L-citrulline

O-succinyl-L-homoserine

1-aminocyclopropane-1-carboxylate

L-canaline

L-cystine

hypoglycin A

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

L-homoserine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxoglutarate

hypoglycin B

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

hydroxyquinol

glycerol

ethanol

methanol

1-dodecanol

3,5-cyclohexadiene-1,2-diol-1-carboxylate

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

geranyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

1-(β-D ribofuranosyl)nicotinamide

neoagarohexaose

neoagarotetraose

neoagarobiose

agaropentaose

agarotriose

maltotriose

maltotetraose

maltopentaose

maltoheptaose

maltohexaose

β-D-fructofuranose

keto-D-fructose

D-xylulose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-ribopyranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

N-acetyl-β-D-mannosamine

D-glyceraldehyde

glycolaldehyde

β-D-galactopyranose

α-D-galactopyranose

3,6-anhydro-L-galactofuranose

3,6-anhydro-α-L-galactopyranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-α-D-mannuronate

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

diacetyl

methylglyoxal

3-(N-morpholino)propanal

formaldehyde

butan-1-al

acetaldehyde

precorrin-5

precorrin-3B

precorrin-4

precorrin-7

precorrin-8x

precorrin-1

precorrin-2

precorrin-3A

precorrin-6B

precorrin-6A

sirohydrochlorin

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dipicolinate

dCMP

dTMP

cytidine-3'-monophosphate

uridine 3'-monophosphate

5,6-dihydrouracil

5,6-dihydrothymine

cytosine

UDP

dCDP

dCTP

CDP

CTP

dUDP

dTDP

dTTP

uracil

dUTP

dUMP

UTP

5-fluorouracil

CMP

UMP

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymine

adenine

guanine

hypoxanthine

isoguanine

preQ₁

xanthosine

guanosine

inosine

adenosine

2'-deoxyguanosine

ITP

GTP

ATP

IDP

GDP

ADP

XMP

GMP

IMP

AMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

dGMP

dAMP

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-phosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-4a-hydroxy-tetrahydrobiopterin

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

8-oxo-GTP

8-oxo-dGTP

cyclic-GMP

cyclic-AMP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

ppGpp

pppGpp

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-AMP

5-fluorocytosine

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA