an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

1-piperideine-2-carboxylate

ammonia

enol-phenylpyruvate

pyruvic oxime

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

5-aminopentanoate

4-oxoglutaramate

2-keto-L-gulonate

selenodiglutathione

glutathioselenol

hydrogen selenide

N-ethylammelide

S-ribosyl-L-homocysteine

autoinducer 2

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

maleamate

4-(γ-L-glutamylamino)butanal

4-(γ-L-glutamylamino)butanoate

dialurate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

mercuriphenyl acetate

2-oxoglutaramate

2-amino-3-carboxymuconate-6-semialdehyde

5-amino-6-(5-phospho-D-ribitylamino)uracil

3-mercaptopyruvate

2-iminoacetate

pimeloyl-CoA

8-amino-7-oxononanoate

7,8-diaminopelargonate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N-acetyl-D-muramate 6-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

thiamine diphosphate

(lipoyl)adenylate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

(S)-4-amino-5-oxopentanoate

acetyl phosphate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

3-carboxy-2,5-dihydro-5-oxofuran-2-acetate

5-amino-6-(D-ribitylamino)uracil

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

2-protocatechuoylphloroglucinolcarboxylate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

7-carboxy-7-deazaguanine

lipid X

(S)-2,3,4,5-tetrahydrodipicolinate

3-amino-1-hydroxyacetone 1-phosphate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

histidinal

carbon monoxide

(S)-2,3-dihydrodipicolinate

salicyl alcohol

methylsalicylate

quinolinate

D-glycero-β-D-manno-heptose 1-phosphate

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

3-dehydroquinate

3-phosphooxypyruvate

γ-glutamyl-L-putrescine

2-aminoacetaldehyde

D-erythro-imidazole-glycerol-phosphate

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

N⁵-carboxyaminoimidazole ribonucleotide

6-hydroxynicotinate

2,5-dihydroxypyridine

N-formylmaleamate

2-hydroxyformononetin

(3R)-sophorol

2'-hydroxypseudobaptigenin

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

(S)-mandelate

(R)-mandelate

D-gluconate 6-phosphate

(2-hydroxyphenyl)acetate

4-fumaryl-acetoacetate

(indol-3-yl)pyruvate

citraconate

(2R,3S)-3-methylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

2-dehydro-3-deoxy-D-galactonate

histidinol

2-dehydro-3-deoxy-D-gluconate

DNA without lesion

N-ethylmaleimide

N-ethylsuccinimide

5-aminolevulinate

porphobilinogen

α-D-ribose-1-methylphosphonate 5-phosphate

5-phospho-α-D-ribose 1,2-cyclic phosphate

L-gulono-1,4-lactone

4-methyl-2-oxopentanoate

selenophosphate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

dethiobiotin

hydroxylamine

glutathione disulfide

3'-phosphoadenylyl-sulfate

β-D-ribosylnicotinate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

pyrazine-2-carboxylate

urea-1-carboxylate

2-maleylacetate

ethanolamine

carbonic acid

(R)-pantothenate

(R)-4'-phosphopantothenate

xanthine

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

propanoyl phosphate

3-deoxy-α-D-manno-2-octulosonate

lipid A disaccharide (E. coli)

lipid IV_A

5-(methylsulfanyl)-ribulose 1-phosphate

deethylsimazine

N-ethylammeline

2-phosphoglycolate

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

(S)-2-amino-6-oxohexanoate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

6-amino-2-oxohexanoate

adenosine 3',5'-bisphosphate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

4-hydroxy-2-nonenal

N²-succinylglutamate

O-ureido-L-homoserine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

O-acetyl-L-serine

L-arginino-succinate

canavaninosuccinate

L-canavanine

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

3-ureidopropanoate

anthranilate

S-adenosyl 3-(methylsulfanyl)propylamine

1-deoxy-L-glycero-tetrulose 4-phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

S-formylglutathione

2-C-methyl-D-erythritol 4-phosphate

3-deoxy-D-manno-octulosonate 8-phosphate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

imidazole acetol-phosphate

L-histidinol phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

carbamoyl phosphate

carboxyphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

γ-L-glutamyl 5-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

urocanate

4-imidazolone-5-propanoate

N-carbamoylputrescine

5-dehydro-D-gluconate

preuroporphyrinogen

orotidine 5'-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

α-D-glucosamine 1-phosphate

coproporphyrinogen III

shikimate

3-dehydroshikimate

hydrogen peroxide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

oxalosuccinate

homogentisate

4-maleyl-acetoacetate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

glycolate

hydroxypyruvate

tartronate semialdehyde

acetoacetate

isopentenyl diphosphate

prenyl diphosphate

4-amino-4-deoxychorismate

2-dehydropantoate

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

citrate

urea

(S)-ureidoglycolate

3-oxopropanoate

4-aminobutanoate

succinate semialdehyde

5-phospho-β-D-ribosylamine

N-(5-phosphoribosyl)-anthranilate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2-keto-D-gluconate

2,5-didehydro-D-gluconate

prephenate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

(R)-1-amino-2-propanol O-2-phosphate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(S)-dihydroorotate

glycerone phosphate

oxaloacetate

phosphoenolpyruvate

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

5-dehydro-4-deoxy-D-glucarate

CO₂

H₂O

2,5-dioxopentanoate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-6A

Mg-protoporphyrin

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobyrate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

protoheme

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrinogen IX

siroheme

Hg⁰

hydrogen sulfide

oxygen

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

CMP-N-acetyl-β-neuraminate

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

acrylonitrile

preQ₀

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

N-acetyl-β-neuraminate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

Fe³⁺

ammonium

K⁺

H⁺

Hg²⁺

Fe²⁺

Mg²⁺

Co²⁺

sulfate

hydrogensulfite

selenite

OH^-

molybdate

thiosulfate

selenide

superoxide

selenate

sulfite

hydrogencarbonate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

glycine betaine

betaine aldehyde

choline

choline sulfate

betaine aldehyde hydrate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

N-acetylputrescine

spermidine

putrescine

S-(hydroxymethyl)glutathione

methanethiol

thiocyanate

glutathione

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

L-cysteate

3-sulfopyruvate

taurine

3-(N-morpholino)propanesulfonate

1-butanesulfonate

isethionate

(R)-S-lactoylglutathione

3-sulfino-L-alanine

all-trans-retinyl palmitate

D-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

isobutanoyl-CoA

2-methylbutanoyl-CoA

phenylacetyl-CoA

dihomo γ-linolenoyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3'-dephospho-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-hydroxybenzoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

2-methylacetoacetyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

malonyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

acetyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E)-dodec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxytetradecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

butanoyl-CoA

propanoyl-CoA

lauroyl-CoA

octanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

icosanoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

methane

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

thiamine

riboflavin

nicotinamide

nicotinate

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxal

pyridoxal 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

menadione

FAD

FADH₂

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinone

caldariellaquinol

ubiquinol-8

3-demethylubiquinol-8

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

isoguanine

8-oxo-dGTP

8-oxo-GTP

dGMP

dAMP

cyclic-AMP

2'-deoxyguanosine

dIDP

dITP

IDP

ITP

guanosine 3'-monophosphate

adenosine 3'-monophosphate

hypoxanthine

dATP

dGTP

1-(5-phospho-β-D-ribosyl)-ATP

IMP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

5'-deoxyadenosine

ppGpp

GTP

pppGpp

dADP

dGDP

GDP

ADP

ATP

XMP

GMP

AMP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

guanosine

inosine

adenosine

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dCTP

dUTP

CTP

UTP

dTMP

dCMP

dUMP

UMP

CMP

dTDP

dUDP

dCDP

UDP

CDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cytidine-3'-monophosphate

uridine 3'-monophosphate

GDP-α-D-rhamnose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannuronate

GDP-α-D-mannose

preQ₁

thymine

uracil

adenine

guanine

5,6-dihydrothymine

5,6-dihydrouracil

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

CDP-α-D-glucose

dTDP-α-D-glucose

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

CDP-4-dehydro-6-deoxy-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

molybdopterin

(R)-lipoate

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

(S)-1-pyrroline-5-carboxylate

precorrin-3B

precorrin-7

precorrin-8x

precorrin-1

precorrin-4

precorrin-5

precorrin-2

precorrin-3A

precorrin-6B

precorrin-6A

sirohydrochlorin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydromonapterin triphosphate

7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

5,6,7,8-tetrahydromonapterin

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-4a-hydroxy-tetrahydrobiopterin

dipicolinate

orotate

quercetin

(3R)-vestitone

benzene

7,8-dihydro-8-oxoguanine

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

urate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,3-dihydroxybenzoate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

menadiol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

salicylate

4-aminobenzoate

diacetyl

methylglyoxal

3-(N-morpholino)propanal

glycolaldehyde

acetaldehyde

formaldehyde

butan-1-al

D-glyceraldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

β-D-ribopyranose

β-D-galactopyranose

α-D-galactopyranose

ethanol

methanol

glycerol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

1-(β-D ribofuranosyl)nicotinamide

α-Kdo-(2→6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

β-L-fucopyranose

α-L-fucopyranose

4-deoxy-L-erythro-hex-4-enopyranuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

D-sedoheptulose 7-phosphate

4-phospho-D-erythronate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-idonate

D-galactonate

D-mannonate

L-gulonate

D-gluconate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

geranyl diphosphate

trans,octacis-decaprenyl phosphate

zeaxanthin-β-D-glucoside

zeaxanthin bis(β-D-glucoside)

zeaxanthin

di-trans,octa-cis-undecaprenyl phosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

6-aminopenicillanate

isopenicillin N

penicillin G

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

allantoate

acetamide

(S)-(+)-allantoin

pyrazinamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

chorismate

maleate

L-aspartate

fumarate

succinate

(S)-malate

α,ω-9Z-octadecenedioate

D-glucarate

D-galactarate

3-(carbamoylamino)-2-methylpropanoate

cis-2-methylaconitate

3-carboxy-cis,cis-muconate

(2S,3S)-2-methylcitrate

(2R,3S)-2-methylisocitrate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

acetate

formate

propanoate

(R)-lactate

decanoate

7-hydroxylaurate

laurate

octanoate

(R)-3-hydroxybutanoate

(15Z)-tetracosenoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

myristate

arachidate

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

linoleate

α-linolenate

stearate

palmitate

oleate

di-homo-γ-linolenate

phytenate

5-deoxy-D-glucuronate

(R)-pantoate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

carbamate

L-serine

L-cysteine

L-asparagine

L-tyrosine

glycine

L-threonine

L-glutamine

L-lysine

L-arginine

L-histidine

L-glutamate

L-methionine

L-isoleucine

L-valine

L-leucine

L-phenylalanine

L-proline

L-tryptophan

L-alanine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

D-glutamate

cis-4-hydroxy-D-proline

D-lysine

D-alanine

L-isoglutamine

L-cystathionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

L-ornithine

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

2-hydroxy-5-oxoproline

S-sulfanyl-L-cysteine

L-saccharopine

L-threonine 3-O-phosphate

3-phospho-L-serine

N-carbamoylglycine

N-acetyl-L-methionine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

L-proline betaine

D-proline betaine

N-methyl-L-proline

O-acetyl-L-homoserine

L-citrulline

L-cystine

1-aminocyclopropane-1-carboxylate

O-succinyl-L-homoserine

L-canaline

L-glutamate-5-semialdehyde

hypoglycin A

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine