an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

CO₂

oxaloacetate

acetyl phosphate

succinate semialdehyde

L-canavanine

canavaninosuccinate

L-arginino-succinate

tartronate semialdehyde

glycerone phosphate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

5-phospho-β-D-ribosylamine

isopentenyl diphosphate

carboxyphosphate

carbamoyl phosphate

citrate

phosphoenolpyruvate

aminoacetone

5-oxo-L-proline

oxalosuccinate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

urocanate

4-imidazolone-5-propanoate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

D-gluconate 6-phosphate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

3-methyl-2-oxobutanoate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

shikimate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N-acetylglutamyl-phosphate

(S)-3-methyl-2-oxopentanoate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

4-aminobutanoate

3-oxopropanoate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

γ-L-glutamyl 5-phosphate

ethylamine

N-isopropylammelide

hydroxyatrazine

4-methyl-2-oxopentanoate

glycolate

ethanolamine

creatinine

2-dehydropantoate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

4'-phosphopantetheine

O-ureido-L-homoserine

4-chloro-2-methyl-cis,cis-muconate

4-methylmuconolactone

2-chloro-4-methyl-cis,cis-muconate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

hydroxypyruvate

hydrogen peroxide

histidinol

L-histidinol phosphate

2-maleylacetate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

urea

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

DNA without lesion

N-(5-phosphoribosyl)-anthranilate

4-amino-4-deoxychorismate

pseudouridine 5'-phosphate

N-acetyl-L-glutamate 5-semialdehyde

(R)-4'-phosphopantothenate

(R)-pantothenate

2-oxoadipate

chlorite

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N⁵-carboxyaminoimidazole ribonucleotide

6-amino-2-oxohexanoate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

prenyl diphosphate

4-prenylphlorisobutyrophenone

xanthine

phloretin

pinocembrin chalcone

nicotinate adenine dinucleotide

β-nicotinate D-ribonucleotide

3-phosphooxypyruvate

S-ribosyl-L-homocysteine

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

orotidine 5'-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

β-D-ribosylnicotinate

α-D-glucosamine 1-phosphate

carbonic acid

coproporphyrinogen III

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

porphobilinogen

2-C-methyl-D-erythritol 4-phosphate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

prephenate

1,6-anhydro-N-acetyl-β-muramate

6-phospho D-glucono-1,5-lactone

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-galactonate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

(R)-mandelate

(S)-mandelate

acetoacetate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

norspermidine

carboxynorspermidine

lipid A disaccharide (E. coli)

lipid X

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

propanoyl phosphate

formamide

3-dehydroshikimate

(4-hydroxyphenyl)acetate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

N-carbamoylputrescine

(S)-dihydroorotate

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

preuroporphyrinogen

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

(S)-2-amino-6-oxohexanoate

butanoyl phosphate

3-mercaptopyruvate

L-quinate

L-β-lysine

anthranilate

histidinal

thiamine diphosphate

oxalate

autoinducer 2

N-(2,3-dihydroxybenzoyl)-L-serine trimer

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine dimer

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

glutathione disulfide

2-dehydro-3-deoxy-D-galactonate 6-phosphate

N-acetyl-D-muramate 6-phosphate

quinolinate

pseudouridine

(S)-ureidoglycolate

hydrogen selenide

glutathioselenol

selenodiglutathione

4-oxoglutaramate

5-aminopentanoate

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

1-piperideine-2-carboxylate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

carbamate

L-2-aminoadipate

L-citrulline

L-cysteine

L-methionine

L-glutamate

L-aspartate

L-phenylalanine

L-alanine

L-arginine

glycine

L-glutamine

L-threonine

L-tryptophan

L-serine

L-asparagine

L-proline

L-leucine

L-valine

L-isoleucine

L-histidine

L-lysine

L-tyrosine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

L-homocysteine

O-phospho-L-homoserine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

L-homoserine

hypoglycin A

L-canaline

L-ornithine

D-ornithine

meso-diaminopimelate

L-2-amino-3-oxobutanoate

L-aspartyl-4-phosphate

L-saccharopine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

cis-4-hydroxy-D-proline

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

3-phospho-L-serine

L-isoglutamine

D-alanine

D-glutamate

D-lysine

D-proline

creatine

β-alanine

(R)-β-lysine

protocatechuate

4-aminobenzoate

acetate

allantoate

(R)-pantoate

orotate

D-mannonate

5-chloro-5-deoxy-D-ribonate

(S)-1-pyrroline-5-carboxylate

pristanate

palmitate

stearate

octanoate

laurate

7-hydroxylaurate

decanoate

butanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

(15Z)-tetracosenoate

oleate

phytenate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

linoleate

α-linolenate

(S)-lactate

(R)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

pyruvate

formate

propanoate

2-oxoglutarate

glyoxylate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

3-phenyl-2-oxopropanoate

3-oxoadipate

cis-aconitate

cis-homoaconitate

(1R,2S)-homoisocitrate

(2R)-homocitrate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

chorismate

3-methyl-cis,cis-muconate

(3E)-2-oxohex-3-enedioate

α,ω-9Z-octadecenedioate

fumarate

succinate

(S)-malate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(S)-(+)-allantoin

6-aminopenicillanate

penicillin G

isopenicillin N

phlorisovalerophenone

rhodopin

1-hydroxyneurosporene

1,1'-dihydroxy-neurosporene

all-trans-lycopene

all-trans neurosporene

1,1'-dihydroxy-1,1',2,2'-tetrahydrolycopene

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

geranyl diphosphate

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

enterobactin

deoxyhumulone

4-prenylphlorisovalerophenone

deoxycohumulone

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

1-oleoyl-2-palmitoyl-phosphatidylglycerol

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

D-galactonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-α-D-glucose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (S. aureus)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-D-fructofuranose

β-D-galactopyranose

α-D-galactopyranose

α-D-ribofuranose

glycolaldehyde

keto-D-fructose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-glucosamine

N-acetyl-β-D-glucosamine

glycerol

maltotetraose

maltopentaose

maltotriose

maltohexaose

maltoheptaose

hydroquinone

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

4,5-dichlorobenzene-1,2-diol

4,6-dichloro-3-methylcatechol

3,6-dichloro-4-methylcatechol

5-chloro-3-methylcatechol

3,4-dichloro-6-methylcatechol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

ethanol

methanol

methylglyoxal

acetaldehyde

formaldehyde

isoliquiritigenin

2',4,4',6'-tetrahydroxychalcone

menadione

caldariellaquinone

diacetyl

4-hydroxyacetophenone

dehypoxanthine futalosine

futalosine

4-hydroxybenzoate

urate

menadiol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

menaquinol-8

ubiquinol-8

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

2,4-dichlorotoluene

2,5-dichlorotoluene

(1R,2S)-3,6-dichloro-4-methylcyclohexa-3,5-diene-1,2-diol

3,4-dichlorotoluene

(1R,2S)-3,4-dichloro-6-methylcyclohexa-3,5-diene-1,2-diol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

6-isobutyl-4-hydroxy-2-pyrone

adenine

guanine

XMP

IMP

AMP

GMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dADP

dIDP

dGTP

dATP

dITP

dGMP

dAMP

hypoxanthine

guanosine

adenosine

xanthosine

inosine

2'-deoxyguanosine

2'-deoxyinosine

2'-deoxyadenosine

tetrahydromethanopterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

cyclic pyranopterin phosphate

molybdopterin

molybdopterin adenine dinucleotide

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

bis(guanylyl molybdopterin) cofactor

bis(molybdenum cofactor)

adenylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

FMN

riboflavin

uracil

thymine

preQ₁

isoguanine

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

UDP

dTMP

dTTP

dCMP

dCTP

dUMP

dUTP

UTP

CTP

uridine 3'-monophosphate

cytidine-3'-monophosphate

CDP

dCDP

dUDP

dTDP

UMP

CMP

uridine

cytidine

thymidine

2'-deoxyuridine

2'-deoxycytidine

cob(I)alamin

adenosylcobalamin

sirohydrochlorin

precorrin-1

precorrin-2

coenzyme A

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

adenosine 3'-monophosphate

guanosine 3'-monophosphate

adenylo-succinate

ppGpp

pppGpp

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5'-deoxyadenosine

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

cyclic-GMP

1-(5-phospho-β-D-ribosyl)-AMP

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NAD⁺

NADP⁺

NADH

NADPH

5'-deoxy-5'-fluoroadenosine

glycine betaine

(S)-NADHX

(R)-NADHX

nicotinate

thiamine

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine

pyridoxal

(indol-3-yl)acetate

phenylacetate

(+)-7-epi-jasmonate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

7-oxolithocholate

cholate

chenodeoxycholate

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

malonyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

isobutanoyl-CoA

3'-dephospho-CoA

(+)-7-epi-jasmonoyl-CoA

(2R)-ethylmalonyl-CoA

(2S)-ethylmalonyl-CoA

dihydro-4-coumaroyl-CoA

isovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

α-linolenoyl-CoA

linoleoyl-CoA

acryloyl-CoA

3-methylglutaconyl-CoA

3-methylcrotonyl-CoA

oxalyl-CoA

formyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

lauroyl-CoA

octanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

7-hydroxylauroyl-CoA

propanoyl-CoA

butanoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-malyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

(+)-2-chloromuconolactone

(+)-5-chloromuconolactone

2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

2-chloro-4-methyl-cis-dienelactone

2,5-dichloro-3-methyl-muconolactone

3,6-dichloro-3a-methyl-dihydro-3H-furo[3,2-b]furan-2,5-dione

3,5-dichloro-2-methyl-muconolactone

5-chloro-3-methyl-cis-dienelactone

2,5-dichloro-4-methyl-muconolactone

trans-dienelactone

cis-dienelactone

5-chloro-trans-dienelactone

3-chloro-2-methyl-dienelactone

2-chloro-5-methyl-dienelactone

2-chloro-3-methyl-dienelactone

2-methyl-cis-dienelactone

2-methyl-trans-dienelactone

5-chloro-2-methyl-dienelactone

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

methanethiol

thiocyanate

S-sulfanylglutathione

agmatine

putrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

superoxide

hydroxyl radical

sulfate

hydrogencarbonate

selenate

sulfite

thiosulfate

nitrite

OH^-

molybdate

selenite

hydrogensulfite

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

Mn²⁺

Ni²⁺

Mg²⁺

Fe²⁺

ammonium

H⁺

2-chloroacetate

2-chloro-cis,cis-muconate

2,3-dichloro-5-methyl-muconate

2-chloro-2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

3,5-dichloro-2-methyl-muconate

2-(2,4-dichloro-5-oxofuran-2-yl)propanoate

2,5-dichloro-3-methyl-muconate

2,3-dichloro-cis,cis-muconate

2-chloro-2-(2-chloro-5-oxofuran-2-yl)acetate

3-chloro-cis,cis-muconate

5-chloromaleylacetate

3-chloro-2-methyl-maleylacetate

2-chloro-5-methyl-maleylacetate

2-chloro-3-methyl-maleylacetate

5-chloro-2-methyl-maleylacetate

(indole-3-yl)acetonitrile

hydrogen cyanide

preQ₀

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(S)-ureidoglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

2-iminobutanoate

2-iminosuccinate

hydrogen sulfide

oxygen

Mg-protoporphyrin

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

uroporphyrinogen-I

siroheme

protoheme

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

ethylphosphate

DNA with lesion