an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

3-methoxy-4-hydroxyphenylglycolaldehyde

dehydroascorbate (bicyclic form)

3-demethylubiquinol-6

3,4-dihydroxyphenylacetaldehyde

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

4-imidazolone-5-propanoate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

xanthine

carbamoyl phosphate

prephenate

dimethylsulfoniopropanoate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

2-iminoacetate

(S)-dihydroorotate

(2Z)-2-(acetamidomethylene)succinate

selenodiglutathione

3-hydroxy-2-methylpyridine-5-carboxylate

glutathioselenol

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

carboxynorspermidine

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

imidazole acetaldehyde

norspermidine

4-imidazoleacetate

5-hydroxyindole thiazolidine carboxylate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

D-erythro-imidazole-glycerol-phosphate

(S)-2-amino-6-oxohexanoate

lipid IV_A

imidazole acetol-phosphate

H₂O

pyruvic oxime

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

prenyl diphosphate

enol-phenylpyruvate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

L-dehydro-ascorbate

2-dehydro-3-deoxy-D-gluconate

5-dehydro-4-deoxy-D-glucarate

4-amino-4-deoxychorismate

4-oxoglutaramate

L-selenocystathionine

α-ribazole

coproporphyrinogen III

CO₂

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

benzoylsuccinyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

quinolinate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

3-(4-hydroxyphenyl)-3-oxo-propionyl-CoA

N-succinyl-L,L-2,6-diaminopimelate

(R)-2,3-dihydroxy-3-methylpentanoate

aminoacetone

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(R)-1-amino-2-propanol O-2-phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

urocanate

N²-succinyl-L-glutamate 5-semialdehyde

hydrogenobyrinate

N²-succinylglutamate

1-deoxy-L-glycero-tetrulose 4-phosphate

4-hydroxy-2-nonenal

5-amino-6-(5-phospho-D-ribitylamino)uracil

porphobilinogen

5-aminolevulinate

1-piperideine 6-carboxylate

dihydrolipoamide

5-amino-6-(D-ribitylamino)uracil

lipoamide

prephytoene diphosphate

N⁵-carboxyaminoimidazole ribonucleotide

itaconate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

hydrogen peroxide

4'-phosphopantetheine

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

2-pyrone-4,6-dicarboxylate

(2R,3S)-2,3-dimethylmalate

5-oxo-L-proline

2-dehydro-3-deoxy-D-gluconate 6-phosphate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

(2S)-2-isopropylmalate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

2-isopropylmaleate

acetoacetate

adenosine 5'-phosphoselenate

(S)-3-methyl-2-oxopentanoate

acetyl phosphate

H₂

3-deoxy-D-manno-octulosonate 8-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

anthranilate

lipid X

lipid A disaccharide (E. coli)

2-C-methyl-D-erythritol 4-phosphate

isopentenyl diphosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-oxo-4-(pyridin-3-yl)butanal

4-oxo-4-(3-pyridyl)-butanoate

pseudooxynicotine

maleamate

N-formylmaleamate

2,5-dihydroxypyridine

N-methylmyosmine

6-hydroxy-3-succinoyl-pyridine

histidinal

histidinol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

3-deoxy-D-arabino-heptulosonate 7-phosphate

α-D-glucosamine 1-phosphate

2-maleylacetate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

3-dehydroquinate

3-dehydroshikimate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(S)-4-amino-5-oxopentanoate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

3-methyl-2-oxobutanoate

L-β-lysine

2-dehydropantoate

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

4-aminobutanoate

2-amino-3-carboxymuconate-6-semialdehyde

(R)-pantothenate

2,3-didehydroadipyl-CoA

preuroporphyrinogen

5,6-dimethylbenzimidazole

β-nicotinate D-ribonucleotide

α-ribazole 5'-phosphate

orotidine 5'-phosphate

(S)-5-amino-3-oxohexanoate

3-deoxy-α-D-manno-2-octulosonate

(3S,5S)-3,5-diaminohexanoate

3-oxopropanoate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

N-carbamoylputrescine

4-amino-2-methyl-5-pyrimidinemethanol

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

nicotinate adenine dinucleotide

γ-L-glutamyl 5-phosphate

S-formylglutathione

dethiobiotin

N-(5-phosphoribosyl)-anthranilate

phosphoenolpyruvate

shikimate 3-phosphate

urea-1-carboxylate

L-canavanine

5-enolpyruvoyl-shikimate 3-phosphate

L-arogenate

L-histidinol phosphate

(E)-2-benzylidenesuccinyl-CoA

hydroxylamine

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

formamide

2-O-(6-phospho-α-D-mannosyl)-D-glycerate

3-phosphooxypyruvate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

methylamine

carbon monoxide

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

2,5-dioxopentanoate

6-aminohexanoate linear dimer

6-aminohexanoate

thiamine phosphate

2-aminoacetaldehyde

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

glycerone phosphate

oxaloacetate

citrate

pimelate

3-ureidopropanoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

4,5-dihydroxyphthalate

6-phospho D-glucono-1,5-lactone

hydrogen selenide

O-ureido-L-homoserine

canavaninosuccinate

succinate semialdehyde

nigerose

L-arginino-succinate

methylsalicylate

carbonic acid

glutathione disulfide

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

2-phosphoglycolate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

homogentisate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

(2-hydroxyphenyl)acetate

salicyl alcohol

glycolate

4-carboxy-2-hydroxymuconate-6-semialdehyde

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

4-pyridoxolactone

pimeloyl-CoA

(4,5-dihydro-5-oxofuran-2-yl)-acetate

8-amino-7-oxononanoate

1-(methylsulfanyl)xylulose 5-phosphate

7,8-diaminopelargonate

5-(methylsulfanyl)-ribulose 1-phosphate

oxalate

oxalosuccinate

2-deoxygluconate

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

3-dehydro-2-deoxy-D-gluconate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-carboxy-L-threo-pentonate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

D-gluconate 6-phosphate

2-carboxy-L-xylonolactone

cyclic- 3,4-O-oxalyl-L-threonate

(3E)-2-oxopent-3-enoate

O-acetyl-L-serine

2-oxopent-4-enoate

urea

(S)-4-hydroxy-2-oxopentanoate

ammonia

2,3-dioxo-L-gulonate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

L-gulono-1,4-lactone

L-threonate

guanidinium

cyclic-2,3-O-oxalyl-L-threonate

shikimate

4-acetamidobutanal

3-maleylpyruvate

4-acetamidobutanoate

hydrogenobyrinate a,c-diamide

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

3,22-dioxochol-4-en-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

benzyl alcohol

butan-1-ol

ethanol

methanol

myo-inositol

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

glycerol

D-mannitol 1-phosphate

D-mannitol

ethylene glycol

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

protocatechuate

ethene

(indol-3-yl)acetate

phenylacetate

methyl (indol-3-yl)acetate

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrin IX

magnesium-protoporphyrin IX 13-monomethyl ester

Mg-protoporphyrin

protoheme

3,8-divinyl protochlorophyllide a

chlorophyllide a

protochlorophyllide a

Fe³⁺

Fe²⁺

Mo²⁺

Mg²⁺

Co²⁺

H⁺

Na⁺

ammonium

trimethyl sulfonium

selenite

hydrogensulfite

OH^-

selenide

superoxide

selenate

nitrite

nitrate

sulfate

sulfite

hydrogencarbonate

thiosulfate

molybdate

phosphonate

phosphate

diphosphate

triphosphate

chloride

oxygen

hydrogen sulfide

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2-O-(α-D-mannosyl)-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

monodehydroascorbate radical

hydroxyl radical

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

2-iminosuccinate

2-octaprenylphenol

D-glucono-1,5-lactone

cis-dienelactone

trans-dienelactone

all-trans-retinyl palmitate

phenylacetyl-CoA

3'-dephospho-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

acetyl-CoA

itaconyl-CoA

malonyl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

isovaleryl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isobutanoyl-CoA

2-methylbutanoyl-CoA

(+)-7-epi-jasmonoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

(S)-3-aminobutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

succinyl-CoA

(2E,5Z)-tetradecenoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

formyl-CoA

oxalyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-octadec-2-enoyl-CoA

oleoyl-CoA

butanoyl-CoA

propanoyl-CoA

(Z)-15-tetracosenoyl-CoA

octanoyl-CoA

decanoyl-CoA

pristanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

3-oxoadipyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

all-trans-retinol

apo-4'-lycopenal

apo-4'-lycopenoate

15-cis-phytoene

all-trans-phytoene

3-hexaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-decaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

(S)-nicotine

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

CDP-4-dehydro-6-deoxy-α-D-glucose

CDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

UDP-α-D-galactose

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-mannosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

α,α-trehalose 6-phosphate

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 6-phosphate

L-ascorbate 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

α-D-mannopyranose 6-phosphate

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

N-acetylmuramate

α-D-mannopyranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

D-xylulose

D-glyceraldehyde

glycolaldehyde

4-deoxy-L-threo-hex-4-enopyranuronate

maltotriose

α,α-trehalose

maltotetraose

D-altronate

D-mannonate

L-gulonate

D-gluconate

N-acetyl-D-mannosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

N-acetyl-β-neuraminate 9-phosphate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

leukotriene-D4

leukotriene-E4

(15Z)-tetracosenoate

butanoate

octanoate

decanoate

(2E,6E)-farnesoate

oleate

(3E,5Z)-tetradecadienoate

γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

palmitate

pristanate

pyruvate

2-oxobutanoate

2-oxoglutarate

glyoxylate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

3-carboxy-cis,cis-muconate

cis-aconitate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

D-threo-isocitrate

propanoate

formate

acetate

(S)-lactate

(R)-lactate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-citrulline

S-adenosyl-L-methionine

hypoglycin A

O-phospho-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

L-canaline

S-sulfo-L-cysteine

L-homocysteine

L-ornithine

S-adenosyl-L-homocysteine

O-succinyl-L-homoserine

meso-diaminopimelate

L-lysine

L-selenocysteine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-valine

L-isoleucine

L-leucine

L-tryptophan

glycine

L-cysteine

L-arginine

L-histidine

L-glutamine

L-alanine

L-serine

L-threonine

L-aspartate

L-tyrosine

L-phenylalanine

L-glutamate

L-proline

L-methionine

L-isoglutamine

L-aspartyl-4-phosphate

L-cystathionine

N^ω-hydroxy-L-arginine

L,L-diaminopimelate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

L-saccharopine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

trans-4-hydroxy-L-proline

erythro-4-hydroxy-L-glutamate

S-methyl-L-methionine

O-acetyl-L-homoserine

L-threonine 3-O-phosphate

3-phospho-L-serine

N-carbamoylglycine

N-acetyl-L-glutamate

D-glutamate

D-alanine

chorismate

fumarate

maleate

succinate

(S)-malate

D-galactarate

orotate

(R)-pantoate

gentisate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

3-oxoadipate

3-(carbamoylamino)-2-methylpropanoate

salicylate

5-chloroprotocatechuate

4-aminobenzoate

benzoate

(R)-3-hydroxybutanoate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

8-oxo-GTP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-ATP

ATP

ADP

2'-deoxyguanosine

pppGpp

ppGpp

XMP

dGDP

dGTP

dADP

dATP

GMP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

AMP

IMP

IDP

XTP

dITP

dIMP

ITP

GTP

GDP

8-oxo-dGTP

5,6-dihydrouracil

5,6-dihydrothymine

UDP

CDP

CMP

UMP

UTP

CTP

β-nicotinamide D-ribonucleotide

reduced β-nicotinamide D-ribonucleotide

dUDP

dCDP

dTDP

dUTP

dCTP

dTTP

dTMP

dCMP

dUMP

cyclic di-3',5'-guanylate

NADPH

NADH

NADP⁺

NAD⁺

adenine

guanine

uracil

thymine

cytosine

2'-deoxycytidine

2'-deoxyuridine

thymidine

cytidine

uridine

xanthosine

adenosine

inosine

guanosine

6,7-dimethyl-8-(1-D-ribityl)lumazine

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-phosphate

cyclic pyranopterin phosphate

molybdopterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

molybdopterin adenine dinucleotide

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

FMN

riboflavin

FAD

FMNH₂

FADH₂

reduced riboflavin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-5A

cobalt-precorrin-2

precorrin-7

precorrin-8x

precorrin-6B

precorrin-1

precorrin-2

precorrin-6A

precorrin-5

precorrin-4

precorrin-3B

precorrin-3A

cobalt-precorrin-3

cobalt-precorrin-4

cobyrinate

cob(I)alamin

adenosylcobalamin

hydantoin

2-methoxy-6-(all-trans-octaprenyl)phenol

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

(indole-3-yl)acetonitrile

hydrogen cyanide

(glutathion-S-yl)-4-hydroxy-2-nonenal

hypoglycin B

urate

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

benzyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

vanillyl mandelate

4-methylphenol

ubiquinol-6

ubiquinol-9

ubiquinol-7

ubiquinol-8

ubiquinol-10

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-9

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-10

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

diacetyl

methylglyoxal

ubiquinone-8

(2E,6E)-farnesal

butan-1-al

1-octanal

1-propanal

formaldehyde

acetaldehyde

phytenal

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

agmatine

N¹-acetylspermidine

N-acetylputrescine

N¹-acetylspermine

spermidine

putrescine

spermine

choline

betaine aldehyde

glycine betaine

hippurate

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

S-(hydroxymethyl)glutathione

glutathione

methanethiol

thiocyanate

5-(2-hydroxyethyl)-4-methylthiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

taurine

(R)-S-lactoylglutathione

ethylphosphate

adenosylcobalamin 5'-phosphate

adenosylcobyrate

cob(I)inamide

adenosylcobinamide

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

cob(II)yrinate a,c-diamide

coenzyme A

nicotinate

L-ascorbate

4-pyridoxate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine

pyridoxine

pyridoxal

(S)-NADHX

(R)-NADHX

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine