ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C12409

creatinine

C14436

pimelate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C12056

L-arginino-succinate

C13986

pseudouridine

C1010

ammonia

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C11543

H2O

C928

CO2

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1265

4-phosphooxy-L-threonine

C3850

5-amino-6-(D-ribitylamino)uracil

C3684

3-deoxy-α-D-manno-2-octulosonate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C7865

urea

C933

L-canavanine

C11654

selenophosphate

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C11802

4'-phosphopantetheine

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C3319

4-methyl-2-oxopentanoate

C12162

hydrogen peroxide

C11748

pseudouridine 5'-phosphate

C14074

prenyl diphosphate

C12355

dethiobiotin

C891

citrate

C6444

oxaloacetate

C11826

oxalosuccinate

C12350

7,8-diaminopelargonate

C13913

N-carbamoylputrescine

C9422

nicotinate adenine dinucleotide

C11857

β-nicotinate D-ribonucleotide

C11604

thiamine diphosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C11606

thiamine phosphate

C1002

anthranilate

C11946

N-(5-phosphoribosyl)-anthranilate

C11832

orotidine 5'-phosphate

C1431

3-dehydroshikimate

C11653

shikimate

C11756

propionamide

C13919

4-guanidinobutanoate

C1303

4-guanidinobutyramide

C8366

(indol-3-yl)acetamide

C1096

acrylate

C1098

acrylamide

C2191

carbamoyl phosphate

C873

coproporphyrinogen III

C12139

preuroporphyrinogen

C12364

isopentenyl diphosphate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1184

5-phospho-β-D-ribosylamine

C1102

O-acetyl-L-serine

C12192

carbonic acid

C11539

xanthine

C13871

L-arogenate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C8364

indole-3-ethanol

C3656

D-gluconate 6-phosphate

C12394

6-phospho D-glucono-1,5-lactone

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C1353

3-phosphooxypyruvate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11652

shikimate 3-phosphate

C11479

phosphoenolpyruvate

C3264

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

C1130

8-amino-7-oxononanoate

C10349

glycerone phosphate

C13635

β-D-ribosylnicotinate

C1108

acetyl phosphate

C12352

(S)-dihydroorotate

C13950

pimeloyl-CoA

C11874

N-succinyl-2-amino-6-ketopimelate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C12164

H2

C11881

N-methylhydantoin

C6361

acetoacetate

C562

4-methyl-3-oxoadipate

C12218

α-D-glucosamine 1-phosphate

C12274

enol-phenylpyruvate

C2033

P1,P4-bis(5'-guanosyl) tetraphosphate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C1196

S-methyl-5'-thioadenosine

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C1268

(R)-4'-phosphopantothenate

C10261

ADP-L-glycero-β-D-manno-heptose

C10260

ADP-D-glycero-β-D-manno-heptose

C11800

(R)-pantothenate

C10794

lipid A disaccharide (E. coli)

C949

lipid X

C908

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

C12369

3-dehydroquinate

C1528

2-dehydropantoate

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C6099

lipid IVA

C1231

5-aminolevulinate

C12214

(S)-4-amino-5-oxopentanoate

C1325

4-amino-4-deoxychorismate

C11760

prephenate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C11767

porphobilinogen

C4676

glutathionylspermidine

C1538

2-C-methyl-D-erythritol 4-phosphate

C13854

hydrogen selenide

C191

L-selenocystathionine

C12324

autoinducer 2

C12029

S-ribosyl-L-homocysteine

C11836

hydroxypyruvate

C13946

5-(methylsulfanyl)-α-D-ribose

C11715

quinolinate

C13627

DNA without lesion

C11483

glycolate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C3279

2-oxopent-4-enoate

C3355

(3E)-2-oxopent-3-enoate

C13855

(2E)-2-hydroxypenta-2,4-dienoate

C15304

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

C1447

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

C12393

D-glycero-β-D-manno-heptose 1-phosphate

C12392

D-glycero-β-D-manno-heptose 1,7-bisphosphate

C592

pseudaminate

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C2263

4-prenylphlorisobutyrophenone

C11849

norspermidine

C13257

carboxynorspermidine

C927

carbon monoxide

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C6030

core oligosaccharide-lipid A (E. coli K-12 core type)

C12105

propan-2-ol

C1550

2-amino-3-carboxymuconate-6-semialdehyde

C12494

N-acetyl-D-muramate 6-phosphate

C12492

1,6-anhydro-N-acetyl-β-muramate

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C352

2-iminoacetate

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C335

7-epicholate

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C9077

(2E,6E)-farnesyl diphosphate

C10988

riboflavin

C10994

thiamine

C10982

nicotinate

C10996

nicotinamide

C7129

5,6,7,8-tetrahydrofolate

C7134

tetrahydropteroyl tri-L-glutamate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C4599

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10595

N10-formyldihydrofolate

C4214

pyridoxine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C10053

FAD

C10052

FMN

C10049

FMNH2

C14500

NADH

C14497

NADPH

C4020

NAD+

C4018

NADP+

C1867

3-demethylubiquinol-8

C1680

menaquinol-8

C5543

ubiquinol-8

C1863

demethylmenaquinol-8

C5392

(S)-NADHX

C5394

(R)-NADHX

C10614

coenzyme A

C13382

acrylonitrile

C13366

(indole-3-yl)acetonitrile

C13354

preQ0

C6287

2-octaprenylphenol

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C8958

superoxide

C6744

CMP-N-acetyl-β-neuraminate

C2765

1-oleoyl-2-lyso-glycerone phosphate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6437

3-phospho-D-glyceroyl-phosphate

C11476

(R)-glycerate

C6427

2,3-diphospho-D-glycerate

C6438

3-phospho-D-glycerate

C6425

2-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C8420

sn-glycerol 1-phosphate

C7121

oxygen

C7118

hydrogen sulfide

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7676

protoporphyrin IX

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C6624

protoheme

C10799

DNA with lesion

C1328

L-cysteinylglycine

C1434

D-alanyl-D-alanine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C6708

2-iminopropanoate

C6596

2-iminosuccinate

C6599

2-iminobutanoate

C11520

hypoglycin B

C8808

D-methionine

C8799

D-alanine

C8797

D-glutamate

C5605

L-histidine

C5575

L-tryptophan

C2469

L-phenylalanine

C5573

L-tyrosine

C5612

L-cysteine

C5609

L-glutamine

C5643

L-asparagine

C5579

L-serine

C12067

glycine

C5577

L-threonine

C5642

L-arginine

C5584

L-lysine

C5607

L-glutamate

C5596

L-aspartate

C5588

L-leucine

C5597

L-alanine

C5581

L-proline

C11444

N-carbamoylsarcosine

C11441

β-alanine

C12303

L-citrulline

C5603

L-isoleucine

C5571

L-valine

C5583

L-methionine

C12255

L-cystine

C12241

L-4-hydroxyglutamate semialdehyde

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12231

L-ornithine

C12237

L-canaline

C12239

L-aspartate 4-semialdehyde

C12261

hypoglycin A

C12245

L-homoserine

C12229

O-phospho-L-homoserine

C2426

S-sulfo-L-cysteine

C12247

L-homocysteine

C12233

L-glutamate-5-semialdehyde

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C12073

L-aspartyl-4-phosphate

C5580

L,L-diaminopimelate

C5595

L-cystathionine

C13322

N-carbamoyl-L-aspartate

C12065

L-saccharopine

C12063

seleno-L-homocysteine

C3628

sarcosine

C3402

3-phospho-L-serine

C7645

guanosine 2',3'-cyclic monophosphate

C7841

adenosine 2',3'-cyclic monophosphate

C7757

ADP

C7844

ATP

C5552

5'-deoxyadenosine

C7795

GDP

C7745

GTP

C7785

hypoxanthine

C7755

2'-deoxyinosine

C11254

5-chloro-5-deoxyribose 1-phosphate

C5546

5'-chloro-5'-deoxyadenosine

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C7741

IMP

C7827

GMP

C10288

adenylo-succinate

C7807

dGDP

C7823

dADP

C7811

XMP

C7653

guanosine 3'-monophosphate

C7641

adenosine 3'-monophosphate

C7751

dGTP

C7759

ITP

C7817

IDP

C7783

dATP

C7749

dITP

C7747

dIDP

C10267

pppGpp

C7809

AMP

C10266

ppGpp

C7840

dGMP

C7743

dAMP

C7780

UDP-α-D-glucose

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C8666

UDP-α-D-galactose

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C8567

UDP-2-acetamido-2,6-dideoxy-β-L-arabino-hex-4-ulose

C8559

UDP-2-acetamido-2,6-dideoxy-α-D-xylo-hex-4-ulose

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7788

UDP-2,4-diacetamido-2,4,6-trideoxy-β-L-altropyranose

C5130

UDP-4-amino-4,6-dideoxy-N-acetyl-β-L-altrosamine

C7826

UDP-N-acetyl-α-D-fucosamine

C7794

UDP-N-acetyl-α-D-quinovosamine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C7444

UDP-N-acetyl-α-D-glucosamine

C1043

GDP-4-dehydro-α-D-rhamnose

C1009

GDP-α-D-mannose

C7189

GDP-β-L-fucose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C8304

CMP-pseudaminate

C15091

inosine

C15094

xanthosine

C15085

guanosine

C15088

adenosine

C2702

cytidine

C2706

uridine

C7306

5'-deoxy-5'-fluoroadenosine

C9540

preQ1

C9454

adenine

C9455

guanine

C8739

uracil

C8750

cytidine 2',3'-cyclic monophosphate

C8747

uridine 2'3'-cyclic monophosphate

C8720

dTDP

C8752

dUDP

C8733

dCDP

C8724

dUTP

C8772

dCTP

C8764

dTTP

C8744

dTMP

C8770

dUMP

C8755

dCMP

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C4243

β-nicotinamide D-ribonucleotide

C2245

CMP

C2241

UMP

C8714

UDP

C8732

CDP

C8760

UTP

C8761

CTP

C6460

cytidine-3'-monophosphate

C6462

uridine 3'-monophosphate

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12708

7,8-dihydroneopterin 3'-phosphate

C10609

7,8-dihydropteroate

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C11481

orotate

C4985

(S)-1-pyrroline-5-carboxylate

C3093

urate

C6043

4-methylphenol

C8974

4-aminobenzoate

C8413

indole

C8335

(indol-3-yl)acetaldehyde

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2768

catechol

C6026

galactosyl-(glucosyl)3-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10228

galactosyl-(glucosyl)2-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10226

α-Kdo-(2→6)-lipid IVA

C10227

heptosyl-Kdo2-lipid IVA

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C10235

heptosyl-Kdo2-lipid A

C10224

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

C10234

(heptosyl)2-Kdo2-lipid A

C10233

glucosyl-(heptosyl)2-Kdo2-lipid A

C10232

glucosyl-(heptosyl)2-Kdo2-lipid A-phosphate

C10231

glucosyl-(heptosyl)3-Kdo2-lipid A-phosphate

C10230

glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C10229

galactosyl-glucosyl-(heptosyl)3-Kdo2-lipid A-bisphosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C9304

trans,octacis-decaprenyl phosphate

C8321

geranyl diphosphate

C5378

geranylgeranyl diphosphate

C9075

mono-trans,octa-cis-decaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C6262

(3S)-linalool

C6261

(3R)-linalool

C2741

1-linoleoyl-sn-glycero-3-phosphocholine

C6241

1-oleoyl-sn-glycerol 3-phosphate

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C3117

dioleoyl phosphatidate

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C10502

1-palmitoyl-2-linoleoyl-phosphatidylcholine

C2258

phlorisovalerophenone

C2266

deoxycohumulone

C2269

deoxyhumulone

C2261

4-prenylphlorisovalerophenone

C666

ferric-enterobactin complex

C668

iron(III) dicitrate

C4937

3'-dephospho-CoA

C5298

acetyl-CoA

C4913

malonyl-CoA

C5186

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

C5182

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

C4901

succinyl-CoA

C5314

2-methylacetoacetyl-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5313

2-methylbutanoyl-CoA

C5635

oleoyl-CoA

C1177

propanoyl-CoA

C1175

butanoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C10758

3-oxoadipyl-CoA

C10760

4-methyl-3-oxoadipyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C1337

crotonyl-CoA

C2598

D-glucono-1,5-lactone

C11485

D-gluconate

C4086

1-(β-D ribofuranosyl)nicotinamide

C10688

maltotriose

C10689

maltotetraose

C10693

sucrose

C2858

glycolaldehyde

C9494

D-glyceraldehyde

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C7085

β-D-glucopyranose

C7087

α-D-glucopyranose

C8835

β-D-fructofuranose

C15288

N-acetylmuramate

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C4960

N-acetyl-β-neuraminate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C11623

2,4-diacetamido-2,4,6-trideoxy-β-L-altropyranose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C10381

a peptidoglycan dimer (mycobacteria)

C10379

a peptidoglycan dimer (E. faeciums)

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10372

a peptidoglycan dimer (S. aureus)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C10383

a peptidoglycan with L,D cross-links (mycobacteria)

C10364

a peptidoglycan with D,D cross-links (mycobacteria)

C6673

sucrose 6F-phosphate

C10340

D-erythrose 4-phosphate

C15289

D-sedoheptulose 7-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C10356

4-phospho-D-erythronate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C6719

β-D-mannopyranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C10604

D-ribulose 5-phosphate

C2057

α-D-ribose-1-phosphate

C7314

5-fluoro-5-deoxy-D-ribose 1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C8819

L-fuculose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C8813

α-D-mannose 1-phosphate

C2040

diacetyl

C2028

acetone

C6246

(S)-lactaldehyde

C3500

acetaldehyde

C3483

formaldehyde

C3485

butan-1-al

C3383

palmitate

C3418

butanoate

C3308

pyruvate

C3301

2-oxoglutarate

C3257

2-oxobutanoate

C3351

glyoxylate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C6371

3-oxoadipate

C11517

acetate

C3421

formate

C3420

propanoate

C6185

(R)-lactate

C13463

(2R,3S)-2-methylisocitrate

C8950

chorismate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C8544

cis-2-methylaconitate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C11482

(R)-pantoate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8033

5-amino-4-imidazolecarboxyamide

C7869

acetamide

C9096

(indol-3-yl)acetate

C4743

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

C4800

3α,7α,12β-trihydroxy-5β-cholan-24-oate

C6332

cholate

C6358

glycocholate

C6352

isocholate

C6306

3-dehydrocholate

C11919

ethylene glycol

C3450

ethanol

C3449

butan-1-ol

C3448

methanol

C10301

agmatine

C3574

spermidine

C3548

putrescine

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C4734

dimethyl sulfide

C4678

glutathione

C12637

3-sulfopyruvate

C12587

L-cysteate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C1689

trimethyl sulfonium

C7022

selenide

C7024

thiosulfate

C7028

nitrite

C7030

nitrate

C7036

hydrogencarbonate

C7057

molybdate

C6762

phosphonate

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7864

Fe3+

C11007

Ni2+

C11011

Cu2+

C10999

Cd2+

C11023

Fe2+

C4320

H+

C4328

ammonium