an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
3-hydroxypropanoate
3-oxopropanoate
ammonia
(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran
enol-phenylpyruvate
(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one
pyruvic oxime
S-ribosyl-L-homocysteine
autoinducer 2
succinate semialdehyde
(2R,3S)-3-methylmalate
citraconate
2,5-diamino-6-(5-phospho-D-ribitylamino)pyrimidin-4(3H)-one
5-amino-6-(5-phospho-D-ribitylamino)uracil
N5-carboxyaminoimidazole ribonucleotide
(R)-mevalonate diphosphate
2-(α-hydroxyethyl)thiamine diphosphate
thiamine diphosphate
N2-acetyl-α-aminoadipate
itaconate
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate
3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA
3-dehydroshikimate
5-oxo-L-proline
5-amino-1-(5-phospho-β-D-ribosyl)imidazole
pseudouridine 5'-phosphate
histidinal
histidinol
2-dehydropantoate
3-(O-geranylgeranyl)-sn-glycerol 1-phosphate
shikimate
(R)-4'-phosphopantothenoyl-L-cysteine
4'-phosphopantetheine
γ-L-glutamyl 5-phosphate
(S)-dihydroorotate
S-adenosyl 3-(methylsulfanyl)propylamine
hydrogen peroxide
(S)-4-amino-5-oxopentanoate
5-aminolevulinate
porphobilinogen
preuroporphyrinogen
citrate
glycerone phosphate
N-acetyl-L-glutamate 5-semialdehyde
N-acetylglutamyl-phosphate
(R)-mevalonate
(R)-5-phosphomevalonate
isopentenyl diphosphate
prenyl diphosphate
D-erythro-imidazole-glycerol-phosphate
glycolate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
2-oxoadipate
α-D-glucosamine 1-phosphate
prephenate
5-phospho-β-D-ribosylamine
creatinine
1-deoxy-L-glycero-tetrulose 4-phosphate
hydroxylamine
(R)-2,3-dihydroxy-3-methylpentanoate
(S)-3-methyl-2-oxopentanoate
adenosine 5'-phosphosulfate
adenosine 5'-phosphoselenate
(2S)-2-isopropyl-3-oxosuccinate
4-methyl-2-oxopentanoate
3-ethylmalate
2-oxovalerate
3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA
3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA
2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA
benzoylsuccinyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA
3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA
oxalosuccinate
(S)-2-acetolactate
(S)-2-aceto-2-hydroxybutanoate
S-methyl-5'-thioadenosine
S-methyl-5-thio-α-D-ribose 1-phosphate
3-dehydroquinate
ethanolamine
5-hydroxytryptophol
5-hydroxyindole acetaldehyde
3-methoxy-4-hydroxyphenylglycolaldehyde
indole-3-glycol
indole-3-glycol aldehyde
isobutanol
3-methylbutanol
3-methylbutanal
2-methylbutanol
2-methylbutanal
2-phenylethanol
(2R,3S)-3-isopropylmalate
2-isopropylmaleate
(2S)-2-isopropylmalate
2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
3-methyl-2-oxobutanoate
shikimate 3-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
arsenite
imidazole acetol-phosphate
L-histidinol phosphate
5-amino-6-(D-ribitylamino)uracil
4-amino-4-deoxychorismate
oxaloacetate
β-nicotinate D-ribonucleotide
quinolinate
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
coproporphyrinogen III
orotidine 5'-phosphate
H2
urea
L-β-lysine
O-ureido-L-homoserine
nicotinate adenine dinucleotide
carbamoyl phosphate
3'-phosphoadenylyl-sulfate
N1-(5-phospho-β-D-ribosyl)glycinamide
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
L-arginino-succinate
canavaninosuccinate
L-canavanine
H2O
phosphoenolpyruvate
3-deoxy-D-arabino-heptulosonate 7-phosphate
4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate
CO2
N-(5-phosphoribosyl)-anthranilate
anthranilate
L-homocysteine
uroporphyrinogen-I
uroporphyrinogen-III
protoporphyrinogen IX
siroheme
hydrogen sulfide
oxygen
2-chloroacetate
sn-glycerol 1-phosphate
sn-glycerol 3-phosphate
3-phospho-D-glyceroyl-phosphate
2-phospho-D-glycerate
3-phospho-D-glycerate
(2R)-2,3-dihydroxy-3-methylbutanoate
(R)-citramalate
(S)-citramalate
5,10-methenyltetrahydrofolate mono-L-glutamate
2-octaprenylphenol
dimethyl sulfide
methionol
3-(methylsulfanyl)propanal
ammonium
H+
Fe2+
trimethyl sulfonium
sulfate
hydrogensulfite
molybdate
selenate
nitrite
nitrate
hydrogencarbonate
sulfite
phosphate
diphosphate
chloride
agmatine
dehydrospermidine
spermidine
spermine
putrescine
2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
glycerophosphoglycerol
glycerophosphoserine
sn-glycero-3-phosphoethanolamine
5-chloro-5-deoxy-D-ribonate
5-chloro-4-hydroxy-2-oxopentanoate
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide
(25S)-3-oxocholest-4-en-26-oate
(25S)-3-oxocholest-4-en-26-oyl-CoA
24-hydroxy-3-oxocholest-4-en-26-oyl-CoA
3,24-dioxocholest-4-en-26-oyl-CoA
(indol-3-yl)acetate
4-hydroxybutanoyl-CoA
3-hydroxypropanoyl-CoA
acryloyl-CoA
malonyl-CoA
itaconyl-CoA
α-linolenoyl-CoA
linoleoyl-CoA
(S)-3-hydroxy-3-methylglutaryl-CoA
vinylacetyl-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA
3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA
(3R)-hydroxy, 6-cis-tridecenoyl-CoA
6-cis, 3-oxo-tridecenoyl-CoA
(3R)-hydroxy, 6-trans-tridecenoyl-CoA
6-trans-3-oxo-tridecenoyl-CoA
(3R)-hydroxy, 4-trans-undecenoyl-CoA
4-trans-3-oxo-undecenoyl-CoA
(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA
5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA
(3R)-hydroxy-5-trans-dodecenoyl-CoA
(5E)-3-oxo-dodec-5-enoyl-CoA
(3S)-hydroxyadipyl-CoA
succinyl-CoA
isobutanoyl-CoA
2-methylacetoacetyl-CoA
acetyl-CoA
(R)-methylmalonyl-CoA
(S)-methylmalonyl-CoA
crotonyl-CoA
phytenoyl-CoA
oleoyl-CoA
(S)-3-hydroxybutanoyl-CoA
(S)-3-hydroxydecanoyl-CoA
(S)-3-hydroxyhexanoyl-CoA
(S)-3-hydroxyoctanoyl-CoA
(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA
(S)-3-hydroxyhexadecanoyl-CoA
(Z)-15-tetracosenoyl-CoA
propanoyl-CoA
octanoyl-CoA
decanoyl-CoA
palmitoyl-CoA
pristanoyl-CoA
3-oxoadipyl-CoA
acetoacetyl-CoA
3-oxopentanoyl-CoA
3-oxodecanoyl-CoA
3-oxohexanoyl-CoA
3-oxooctanoyl-CoA
3-oxo-(5Z)-tetradecenoyl-CoA
3-oxo-palmitoyl-CoA
FAD
FMNH2
FMN
(S)-NADHX
(R)-NADHX
NADH
NADPH
NAD+
NADP+
molybdopterin
coenzyme A
MoO2-molybdopterin cofactor
7,8-dihydrofolate monoglutamate
tetrahydropteroyl tri-L-glutamate
5,6,7,8-tetrahydrofolate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl tri-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
nicotinate
riboflavin
pyridoxal 5'-phosphate
menadione
(S)-1-pyrroline-5-carboxylate
precorrin-2
precorrin-1
sirohydrochlorin
6,7-dimethyl-8-(1-D-ribityl)lumazine
reduced riboflavin
7,8-dihydroneopterin 2'-phosphate
7,8-dihydroneopterin 3'-phosphate
7,8-dihydroneopterin
6-(hydroxymethyl)-7,8-dihydropterin
(7,8-dihydropterin-6-yl)methyl diphosphate
molybdopterin adenine dinucleotide
cyclic pyranopterin phosphate
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydroneopterin 2',3'-cyclic phosphate
adenine
2'-deoxyadenosine
2'-deoxyguanosine
adenosine
dAMP
dGMP
dIMP
dATP
dGTP
dITP
dADP
dGDP
dIDP
IDP
GDP
ADP
IMP
XMP
GMP
AMP
XTP
ITP
GTP
ATP
uracil
orotate
dTDP
dTTP
dCTP
dUDP
dUTP
UTP
CDP
UDP
dCMP
dCDP
CTP
dUMP
dTMP
UDP-α-D-glucose
UDP-α-D-glucuronate
UDP-N-acetyl-α-D-mannosamine
UDP-N-acetyl-α-D-glucosamine
CMP
UMP
(indole-3-yl)acetonitrile
3-hexaprenyl-4-hydroxybenzoate
4-hydroxybenzoate
4-tyrosol
3-methoxy-4-hydroxyphenylglycol
(4-hydroxyphenyl)acetaldehyde
phenylacetaldehyde
indole
(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate
menadiol
3,4-dihydroxyphenylglycol
3,4-dihydroxyphenylglycolaldehyde
4-aminobenzoate
chorismate
succinate
fumarate
L-aspartate
(S)-malate
(1R,2S)-homoisocitrate
cis-homoaconitate
cis-aconitate
(2R)-homocitrate
D-threo-isocitrate
4-hydroxybutanoate
(R)-lactate
propanoate
acetate
pyruvate
formate
octanoate
decanoate
(15Z)-tetracosenoate
oleate
linoleate
α-linolenate
(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate
phytenate
pristanate
palmitate
3-phenyl-2-oxopropanoate
2-oxobutanoate
2-oxoglutarate
L-2-aminoadipate
L-serine
creatine
(R)-β-lysine
L-proline
L-leucine
glycine
L-glutamine
L-glutamate
L-histidine
L-lysine
L-arginine
L-cysteine
L-threonine
L-tyrosine
L-asparagine
L-tryptophan
L-aspartyl-4-phosphate
N-acetyl-L-ornithine
N-acetyl-L-citrulline
N-acetyl-L-glutamate
N-carbamoyl-L-aspartate
O-acetyl-L-homoserine
L-citrulline
L-valine
L-isoleucine
L-glutamate-5-semialdehyde
O-succinyl-L-homoserine
S-adenosyl-L-homocysteine
L-homoserine
O-phospho-L-homoserine
L-aspartate 4-semialdehyde
S-adenosyl-L-methionine
L-ornithine
L-canaline
L-methionine
L-cystathionine
diacetyl
glycolaldehyde
butan-1-al
acetaldehyde
1-propanal
isobutanal
phytenal
α-D-glucopyranose
β-D-glucopyranose
butan-1-ol
ethanol
propan-1-ol
phytol
glycerol
myo-inositol
1D-myo-inositol 1-monophosphate
1D-myo-inositol 3-monophosphate
saturated CDP-archaeol
unsaturated CDP-archaeol
2,3-bis-O-phytanyl-sn-glycerol 1-phosphate
2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate
(2E,6E)-farnesyl diphosphate
phytyl diphosphate
3-nonaprenyl-4-hydroxybenzoate
3-heptaprenyl-4-hydroxybenzoate
3-decaprenyl-4-hydroxybenzoate
3-octaprenyl-4-hydroxybenzoate
all-trans-nonaprenyl diphosphate
all-trans-octaprenyl diphosphate
all-trans-hexaprenyl diphosphate
all-trans-heptaprenyl diphosphate
all-trans-decaprenyl diphosphate
geranylgeranyl diphosphate
di-trans,octa-cis-undecaprenyl diphosphate
sucrose
N-acetyl-α-D-glucosamine 1-phosphate
N-acetyl-α-D-mannosamine
α-L-fucopyranose
keto-D-fructose
β-D-fructofuranose
L-fuculose
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine
ADP ribose 1'',2''-cyclic phosphate
ADP ribose 1''-phosphate
ADP-D-ribose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
D-sedoheptulose 7-phosphate
1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate
D-erythrose 4-phosphate
5-phospho-α-D-ribose 1-diphosphate
β-D-fructose 1,6-bisphosphate
D-fructose 6-phosphate
β-D-fructofuranose 6-phosphate
β-D-glucose 6-phosphate
α-D-glucose 6-phosphate
L-xylulose 5-phosphate
D-xylulose 5-phosphate
D-ribulose 5-phosphate
L-ribulose 5-phosphate
aldehydo-D-ribose 5-phosphate
β-D-glucopyranose 1-phosphate
adenylo-succinate
cyclic-AMP
1-(5-phospho-β-D-ribosyl)-AMP
1-(5-phospho-β-D-ribosyl)-ATP
5'-deoxyadenosine
β-nicotinamide D-ribonucleotide
reduced β-nicotinamide D-ribonucleotide
2-iminosuccinate
N-acetyl-L-glutaminyl-L-glutamine
N-acetyl-L-glutaminyl-L-glutamine amide