an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

pimeloyl-CoA

8-amino-7-oxononanoate

7,8-diaminopelargonate

dethiobiotin

5-amino-6-(5-phospho-D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

squalene

hop-22(29)-ene

β-D-ribosylnicotinate

2-oxoglutaramate

lipid X

lipid A disaccharide (E. coli)

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

4-phosphooxy-L-threonine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

O-acetyl-L-serine

3-deoxy-D-arabino-heptulosonate 7-phosphate

4-hydroxy-2-nonenal

S-formylglutathione

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

4'-phosphopantetheine

α-D-galactosyl-diphosphoundecaprenol

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

3-dehydroquinate

3-dehydroshikimate

N-acetyl-L-glutamate 5-semialdehyde

prephytoene diphosphate

(2S)-4-acetamido-2-aminobutanoate

ectoine

N-(5-phosphoribosyl)-anthranilate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

adenosine 3',5'-bisphosphate

3'-phosphoadenylyl-sulfate

5-(methylsulfanyl)-ribulose 1-phosphate

3-demethylubiquinol-6

β-nicotinate D-ribonucleotide

quinolinate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

2-C-methyl-D-erythritol 4-phosphate

thiamine diphosphate

5-amino-6-(D-ribitylamino)uracil

3-amino-1-hydroxyacetone 1-phosphate

6-phospho D-glucono-1,5-lactone

oxaloacetate

phosphoenolpyruvate

hydrogen peroxide

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

(S)-4-amino-5-oxopentanoate

porphobilinogen

preuroporphyrinogen

L-gulono-1,4-lactone

5-deoxy-α-ribose 1-phosphate

S-methyl-5'-thioadenosine

S-methyl-5-thio-α-D-ribose 1-phosphate

5-oxo-L-proline

carbamoyl phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

acetyl phosphate

5-enolpyruvoyl-shikimate 3-phosphate

dimethylsulfoniopropanoate

4-acetamidobutanal

4-acetamidobutanoate

D-glucurono-6,3-lactone

prop-2-ynal

propynoate

3,4-dihydroxyphenylacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxyindole acetate

imidazole acetaldehyde

4-imidazoleacetate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

N-acetylglutamyl-phosphate

orotidine 5'-phosphate

coproporphyrinogen III

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

CO₂

isopentenyl diphosphate

γ-L-glutamyl 5-phosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

H₂O

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

dehydroascorbate (bicyclic form)

cyclic-2,3-O-oxalyl-L-threonate

L-dehydro-ascorbate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-oxoglutaramate

1-piperideine 6-carboxylate

α-D-galacturonate 1-phosphate

2-keto-D-gluconate

2-dehydro-6-phospho-D-gluconate

L-xylo-hex-3-ulono-1,4-lactone

selenodiglutathione

glutathioselenol

S-ribosyl-L-homocysteine

autoinducer 2

6-(2-amino-2-carboxylatoethyl)-7-hydroxy-8-oxo-1,2,3,4,7,8-hexahydroquinoline-2,4-dicarboxylate

2-amino-4-[5-(2-amino-2-carboxylatoethyl)-2-hydroxyphenyl]pentanedioate

2-amino-4-[3-(2-amino-2-carboxylatoethyl)-6-oxocyclohexa-1,4-dien-1-yl]pentanedioate

6-(2-amino-2-carboxylatoethyl)-1,2,3,4-tetrahydroquinoline-2,4-dicarboxylate

2-amino-3-carboxymuconate-6-semialdehyde

7-epicholate

3α,12α-dihydroxy-7-oxo-5β-cholan-24-oate

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

1,6-anhydro-N-acetyl-β-muramate

N²-succinyl-L-ornithine

N²-succinyl-L-arginine

(2Z)-2-(acetamidomethylene)succinate

succinate semialdehyde

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

4-imidazolone-5-propanoate

urocanate

4-amino-2-methyl-5-pyrimidinemethanol

pyruvic oxime

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

acetoacetate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

(S)-2-amino-6-oxohexanoate

N-acetyl-D-muramate 6-phosphate

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

ammonia

2-phosphoglycolate

glycolate

carbon monoxide

hydroxylamine

S-adenosyl 3-(methylsulfanyl)propylamine

nigerose

2-keto-L-gulonate

N-succinyl-L,L-2,6-diaminopimelate

1-deoxy-L-glycero-tetrulose 4-phosphate

H₂

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

3-phosphonopyruvate

presqualene diphosphate

carbonic acid

D-gluconate 6-phosphate

oxalosuccinate

formamide

4-pyridoxolactone

glutathione disulfide

2-oleoylglycerol

α-ribazole 5'-phosphate

α-ribazole

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

ethanolamine

methylamine

N-ethylglycine

ethylamine

2-iminoacetate

(L-threonylcarbamoyl)adenylate

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

benzoylsuccinyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

hydrogen selenide

itaconate

L-canavanine

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

L-histidinol phosphate

(2S)-2-isopropylmalate

2-isopropylmaleate

DNA without lesion

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

prephenate

urea

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

3-deoxy-D-manno-octulosonate 8-phosphate

3-deoxy-α-D-manno-2-octulosonate

histidinal

histidinol

shikimate

shikimate 3-phosphate

4-amino-4-deoxychorismate

glycerone phosphate

lipid IV_A

nicotinate adenine dinucleotide

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

citrate

L-β-lysine

6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,7,8-hexahydroquinoline 2,4-dicarboxylate

5-aminolevulinate

α-D-glucosamine 1-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(S)-dihydroorotate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

anthranilate

N-carbamoylputrescine

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

2-dehydropantoate

(R)-pantothenate

hydroxypyruvate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

2-(α-hydroxyethyl)thiamine diphosphate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

(2E,6E)-farnesyl diphosphate

pristanate

glycine betaine

betaine aldehyde hydrate

choline

betaine aldehyde

agmatine

spermidine

putrescine

(2Z)-2-aminobut-2-enoate

2-iminopropanoate

2-aminoprop-2-enoate

N¹-citryl-N⁶-acetyl-N⁶-hydroxy-L-lysine

aerobactin

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

2-iminobutanoate

2-iminosuccinate

acetamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

nicotinamide

methane

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3α,7α,12β-trihydroxy-5β-cholan-24-oate

3α,7α-dihydroxy-12-oxo-5β-cholan-24-oate

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

3-dehydrocholate

isocholate

glycocholate

cholate

(indol-3-yl)acetate

L-cysteinylglycine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

D-glucono-1,5-lactone

L-galactono-1,4-lactone

malonyl-CoA

3'-dephospho-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-hydroxybenzoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

acetyl-CoA

succinyl-CoA

(S)-3-aminobutanoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3S)-hydroxyadipyl-CoA

itaconyl-CoA

crotonyl-CoA

phytenoyl-CoA

phytanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-palmitoyl-CoA

FAD

FMNH₂

FMN

(S)-NADHX

(R)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinol

ubiquinol-10

ubiquinol-7

ubiquinol-6

ubiquinol-8

ubiquinol-9

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-7

3-demethylubiquinol-8

3-demethylubiquinol-9

caldariellaquinone

coenzyme A

7,8-dihydrofolate monoglutamate

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

riboflavin

thiamine

L-ascorbate

nicotinate

all-trans-retinoate

all-trans-retinal

pyridoxine 5'-phosphate

4-pyridoxate

pyridoxamine

pyridoxal 5'-phosphate

pyridoxine

pyridoxal

menadione

(S)-1-pyrroline-5-carboxylate

adenine

2'-deoxyadenosine

2'-deoxyguanosine

guanosine

inosine

xanthosine

adenosine

dAMP

dGMP

dGTP

dATP

dITP

dGDP

dADP

dIDP

GDP

ADP

IDP

GMP

IMP

XMP

AMP

GTP

ATP

ITP

dTMP

dTDP

dCTP

dUTP

UTP

uracil

CTP

orotate

UDP

dCMP

dUMP

dUDP

dTTP

dCDP

CDP

cytidine

uridine

UMP

CMP

UDP-α-D-glucuronate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-α-D-glucose

UDP-α-D-galacturonate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

preQ₁

adenosylcobalamin

cob(I)alamin

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-5A

precorrin-1

precorrin-2

cobalt-precorrin-3

cobalt-precorrin-4

sirohydrochlorin

cobyrinate

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

baicalein

6,7-dehydrobaicalein

preQ₀

acrylonitrile

(indole-3-yl)acetonitrile

hydrogen cyanide

salicylaldehyde

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxymandelate

salicylate

4-aminobenzoate

benzoate

vanillyl mandelate

benzaldehyde

indole

(indol-3-yl)acetaldehyde

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

menadiol

4-methylphenol

3-(methylsulfanyl)propanoate

L-α-amino-ε-keto-pimelate

L-tryptophan

L-tyrosine

L-histidine

D-alanine

D-glutamate

seleno-L-homocysteine

L-selenomethionine

L-aspartyl-4-phosphate

S-sulfanyl-L-cysteine

sarcosine

N⁶-acetyl-N⁶-hydroxy-L-lysine

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-acetyl-L-methionine

N-acetyl-L-glutamate

N⁶-hydroxy-L-lysine

N-carbamoyl-L-aspartate

3-phospho-L-serine

L-citrulline

L-homocysteine

L-aspartate 4-semialdehyde

L-cystine

hypoglycin A

L-homoserine

O-succinyl-L-homoserine

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

L-canaline

L-ornithine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

L-lysine

meso-diaminopimelate

L-selenocysteine

L-serine

L-glutamine

L-asparagine

glycine

L-aspartate

L-alanine

L-proline

L-glutamate

L-methionine

L-leucine

L-valine

L-isoleucine

L-arginine

L-threonine

L-cysteine

L-2,4-diaminobutanoate

L-cystathionine

L-isoglutamine

L,L-diaminopimelate

β-alanine

acetate

D-gluconate

(R)-pantoate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

3-(4-hydroxyphenyl)pyruvate

pyruvate

2-oxoglutarate

2-oxobutanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

chorismate

succinate

fumarate

(S)-malate

D-glucarate

(2R,3S)-2-methylisocitrate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

D-threo-isocitrate

(R)-lactate

(S)-lactate

formate

propanoate

butanoate

octanoate

decanoate

(2E,6E)-farnesoate

(15Z)-tetracosenoate

(15S)-HPETE

oleate

apo-4'-lycopenoate

arachidonate

γ-linolenate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

phytenate

palmitate

a coenzyme-A group

pyrroloquinoline quinone

methylglyoxal

diacetyl

(2E,6E)-farnesal

glycolaldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

L-sorbosone

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

formaldehyde

acetaldehyde

1-octanal

1-propanal

(S)-lactaldehyde

(R)-lactaldehyde

phytenal

myo-inositol

scyllo-inosose

1-amino-1-deoxy-scyllo-inositol

1D-myo-inositol 4-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

methanol

ethanol

glycerol

D-sorbitol

1-oleoyl-sn-glycerol 3-phosphate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

(3S)-2,3-epoxy-2,3-dihydrosqualene

phytyl diphosphate

apo-4'-lycopenal

15-cis-phytoene

all-trans-phytoene

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

betanidin

betanidin quinone

1-(β-D ribofuranosyl)nicotinamide

keto-L-sorbose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

L-sorbosone 1,4-lactone

L-sorbosone 2,6-lactone

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

GDP-α-D-glucose

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

D-sedoheptulose 7-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-glucose 6-phosphate

β-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

sucrose

α,α-trehalose

L-gulonate

aldehydo-L-galactonate

pppGpp

ppGpp

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-AMP

cyclic-GMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

cobalt-factor III

cobalt-sirohydrochlorin

adenosylcobalamin 5'-phosphate

Mg-protoporphyrin

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

protoheme

nitrous oxide

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

(Z,Z)-bilirubin-IX α

(Z,Z)-biliverdin-IX α

hydrogen sulfide

oxygen

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

5,10-methenyltetrahydrofolate mono-L-glutamate

2-octaprenylphenol

superoxide

monodehydroascorbate radical

nitric oxide

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

S-(hydroxymethyl)glutathione

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

glutathione

thiocyanate

methanethiol

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

(R)-S-lactoylglutathione

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

nitrite

nitrate

hydrogensulfite

hydrogencarbonate

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

ammonium

H⁺

Mg²⁺

Co²⁺

Fe²⁺