an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

glycolate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

4-amino-2-methyl-5-pyrimidinemethanol

γ-L-glutamyl 5-phosphate

methylsalicylate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

3-dehydroshikimate

3-dehydroquinate

presqualene diphosphate

carbonic acid

2-dehydro-3-deoxy-D-gluconate 6-phosphate

carbon monoxide

5-ureidoimidazole-4-carboxylate

5-aminoimidazole-4-carboxylate

4-aminoimidazole

3,5-dihydro-4H-imidazol-4-one

mercuriphenyl acetate

quinolinate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

scopolin

4-hydroxybenzaldehyde

cis-coumarinic acid-β-D-glucoside

1-deoxy-L-glycero-tetrulose 4-phosphate

4-methylumbelliferyl glucoside

5-amino-6-(5-phospho-D-ribitylamino)uracil

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N⁵-carboxyaminoimidazole ribonucleotide

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

2-iminoacetate

α-D-galacturonate 1-phosphate

L-gulono-1,4-lactone

L-xylo-hex-3-ulono-1,4-lactone

oxalosuccinate

L-dehydro-ascorbate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

L-canavanine

tartronate semialdehyde

5-dehydro-4-deoxy-D-glucarate

(2S,3S)-2,3-dihydroxy-5-oxohexanedioate

2-oxopent-4-enoate

nicotinate adenine dinucleotide

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

shikimate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

β-nicotinate D-ribonucleotide

4'-phosphopantetheine

(R)-4'-phosphopantothenoyl-L-cysteine

urea-1-carboxylate

urea

(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-muramate 6-phosphate

(R)-5-phosphomevalonate

(R)-mevalonate

CO₂

(R)-mevalonate diphosphate

prenyl diphosphate

prephenate

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

(S)-2,3,4,5-tetrahydrodipicolinate

L-selenocystathionine

morphinone

oxaloacetate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

3-deoxy-D-arabino-heptulosonate 7-phosphate

phosphoenolpyruvate

xanthine

2-amino-2-deoxy-D-gluconate 6-phosphate

acetyl phosphate

4-hydroxy-2-nonenal

isopentenyl diphosphate

N-succinyl-L,L-2,6-diaminopimelate

autoinducer 2

S-ribosyl-L-homocysteine

carbamoyl phosphate

N-acetylglutamyl-phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

N-acetyl-L-glutamate 5-semialdehyde

O-acetyl-L-serine

hydrogen peroxide

hydrogen selenide

N-(5-phosphoribosyl)-anthranilate

anthranilate

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

indole-3-glycol aldehyde

indole-3-glycol

2-methylbutanal

2-methylbutanol

isobutanol

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-methoxy-4-hydroxyphenylglycolaldehyde

5-hydroxyindole acetaldehyde

5-hydroxytryptophol

3-methylbutanal

3-methylbutanol

2-phenylethanol

2-amino-3-carboxymuconate-6-semialdehyde

(S)-2-acetolactate

3-demethylubiquinol-6

H₂O

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-amino-6-(D-ribitylamino)uracil

glycerone phosphate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

S-acetyldihydrolipoamide

dihydrolipoamide

lipoamide

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

cyclic-2,3-O-oxalyl-L-threonate

acetoacetate

dehydroascorbate (bicyclic form)

ammonia

4-fumaryl-acetoacetate

5-hydroxyindole thiazolidine carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

3-phosphooxypyruvate

(1R,2R)-cyclohexa-3,5-diene-1,2-diol

ethanolamine

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

2-oleoylglycerol

(indol-3-yl)acetamide

4-guanidinobutanoate

4-guanidinobutyramide

propionamide

acrylate

acrylamide

(lipoyl)adenylate

DNA without lesion

(L-threonylcarbamoyl)adenylate

4-amino-4-deoxychorismate

iminodiacetate

nitrilotriacetate

α-D-glucosamine 1-phosphate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

histidinol

histidinal

L-histidinol phosphate

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

glutathione disulfide

citrate

pseudaminate

orotidine 5'-phosphate

1,6-anhydro-N-acetyl-β-muramate

dihydroxyacetone

15-cis-4,4'-diapophytoene

salicyl alcohol

S-formylglutathione

β-D-ribosylnicotinate

4-phosphooxy-L-threonine

H₂

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(R)-4'-phosphopantothenate

(R)-pantothenate

4-pyridoxolactone

(S)-dihydroorotate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

Hg⁰

oxygen

hydrogen sulfide

hydrogen cyanide

ethylphosphate

phenylacetate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

L-α-amino-ε-keto-pimelate

L-citrulline

L-isoleucine

L-leucine

L-tyrosine

L-methionine

L-proline

L-serine

L-aspartate

L-phenylalanine

L-glutamine

L-alanine

glycine

L-glutamate

L-tryptophan

L-cysteine

L-valine

L-threonine

L-histidine

L-lysine

L-arginine

L-asparagine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-homocysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

O-succinyl-L-homoserine

L-homoserine

L-ornithine

S-sulfo-L-cysteine

L-aspartate 4-semialdehyde

meso-diaminopimelate

L-selenocysteine

L-norvaline

L,L-diaminopimelate

L-cystathionine

L-aspartyl-4-phosphate

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

D-serine

D-aspartate

D-methionine

D-alanine

D-glutamate

L-selenomethionine

seleno-L-homocysteine

N-formimino-glycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

O-acetyl-L-homoserine

3-phospho-L-serine

(S)-3-amino-2-methylpropanoate

4-methylphenol

nicotinamide

5-amino-4-imidazolecarboxyamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

acetamide

(+)-7-epi-jasmonate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

hydroquinone

2,3-dihydroxybenzoate

3,4-dihydroxyphenylglycolaldehyde

3,4-dihydroxyphenylglycol

catechol

myo-inositol

D-galactosylononitol

galactinol

D-ononitol

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 5-monophosphate

butan-1-ol

propan-1-ol

phytol

ethanol

methanol

(3S)-linalool

(3R)-linalool

glycerol

D-mannitol 1-phosphate

dGMP

2'-deoxyguanosine

2'-deoxyadenosine

dAMP

GMP

XMP

ADP

GDP

GTP

dGDP

dADP

ATP

cyclic-AMP

pppGpp

ppGpp

dGTP

ITP

IDP

dATP

dITP

dIDP

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

AMP

IMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

hypoxanthine

5'-deoxyadenosine

guanosine

xanthosine

adenosine

inosine

thymidine

2'-deoxyuridine

2'-deoxycytidine

uridine

cytidine

adenine

purine

guanine

uracil

preQ₁

5-hydroxy-CTP

2-hydroxy-dATP

NADPH

NADH

NADP⁺

NAD⁺

uridine 3'-monophosphate

cytidine-3'-monophosphate

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dUDP

dCDP

dTDP

dUTP

dTTP

dCTP

dCMP

dTMP

dUMP

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

UMP

CMP

CDP

UDP

UTP

CTP

UDP-α-D-glucose

ADP-α-D-glucose

GDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-glucuronate

UDP-2,4-diacetamido-2,4,6-trideoxy-β-L-altropyranose

UDP-4-amino-4,6-dideoxy-N-acetyl-β-L-altrosamine

UDP-N-acetyl-α-D-fucosamine

UDP-N-acetyl-α-D-quinovosamine

UDP-α-D-galactofuranose

UDP-α-D-galacturonate

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-2-acetamido-2,6-dideoxy-β-L-arabino-hex-4-ulose

UDP-2-acetamido-2,6-dideoxy-α-D-xylo-hex-4-ulose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

ADP-D-ribose

GDP-α-D-mannose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CMP-pseudaminate

(S)-1-pyrroline-5-carboxylate

aminomethylpyrimidine

formylaminopyrimidine

orotate

7,8-dihydrolumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

7,8-dihydroneopterin 3'-phosphate

sepiapterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

L-erythro-7,8-dihydrobiopterin

7,8-dihydropteroate

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

6,7-dimethyl-8-(1-D-ribityl)lumazine

FMNH₂

reduced riboflavin

FADH₂

FAD

FMN

riboflavin

scopoletin

coumarin

4-methylumbelliferone

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

D-gluconate

acetate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

stearate

palmitate

butanoate

cis-aconitate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

D-threo-isocitrate

glyoxylate

2-oxoglutarate

pyruvate

2-oxobutanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

formate

propanoate

(R)-lactate

(S)-lactate

4,4'-diapolycopenedioate

(3E)-2-oxohex-3-enedioate

chorismate

succinate

fumarate

(S)-malate

salicylate

4-aminobenzoate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

N-acetyl-L-glutaminyl-L-glutamine amide

N-acetyl-L-glutaminyl-L-glutamine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

4-hydroxybenzoate

6,8-dihydroxypurine

8-hydroxypurine

benzene

4-tyrosol

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

3-methoxy-4-hydroxyphenylglycol

3-demethylubiquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-8

3-demethylubiquinol-9

ubiquinol-7

ubiquinol-10

ubiquinol-8

ubiquinol-6

ubiquinol-9

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

coumarinate

2-trans-6-trans-tridecadienoyl-CoA

6-trans-tridecenoyl-CoA

(5Z)-tetradecenoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

4-cis-undecenoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

6-cis-tridecenoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

1-oleoyl-2-lyso-glycerone phosphate

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

all-trans-4,4'-diaponeurosporene

all-trans-4,4'-diapo-ζ-carotene

all-trans-4,4'-diapophytofluene

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

(2E,6E)-farnesyl diphosphate

all-trans-retinyl palmitate

all-trans-retinol

all-trans-retinal

geranyl diphosphate

4,4'-diapolycopenedioate glycosyl diester

β-carotene 15,15' epoxide

4,4'-diapolycopen-4,4'-dial

β-carotene

all-trans-4,4'-diapolycopene

15,15'-dihydroxy-β-carotene

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

morphine

L-galactono-1,4-lactone

D-glucono-1,5-lactone

2-methylacetoacetyl-CoA

2-methylbutanoyl-CoA

phenylacetyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

acetyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

methylacrylyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

CoA-disulfide

3'-dephospho-CoA

isobutanoyl-CoA

malonyl-CoA

(3Z)-dodec-3-enoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

butanoyl-CoA

propanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

crotonyl-CoA

choline

glycine betaine

betaine aldehyde

betaine aldehyde hydrate

putrescine

spermidine

cadaverine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

dimethyl sulfide

3-(methylsulfanyl)propanal

methionol

S-(hydroxymethyl)glutathione

glutathione

thiocyanate

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

taurine

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

(R)-S-lactoylglutathione

aldehydo-L-galactonate

L-gulonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

2,4-diacetamido-2,4,6-trideoxy-β-L-altropyranose

lotaustralin

neolinustatin

linamarin

linustatin

taxiphyllin

salicin 6-phosphate

arbutin-6-phosphate

methyl β-D-glucoside 6-phosphate

4-phospho-D-erythronate

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

α-D-ribose-1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-tagatofuranose 1,6-bisphosphate

D-tagatofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-galactose 6-phosphate

α-D-galactose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-mannopyranose 6-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (mycobacteria)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

sucrose 6^F-phosphate

α-lactose 6'-phosphate

β-D-cellobiose 6'-phosphate

β-D-cellobiose

maltotriose

sucrose

maltopentaose

maltotetraose

maltoheptaose

maltohexaose

β-D-fructofuranose

aldehydo-D-ribose

β-D-ribopyranose

α-D-ribofuranose

β-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

D-glyceraldehyde

glycolaldehyde

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

Fe³⁺

Cu²⁺

Hg²⁺

Co²⁺

Zn²⁺

Cd²⁺

Fe²⁺

Mg²⁺

Ca²⁺

ammonium

H⁺

Na⁺

trimethyl sulfonium

nitrate

OH^-

hydrogencarbonate

thiosulfate

superoxide

hydrogensulfite

sulfite

chloride

phosphate

diphosphate

a coenzyme-A group

butan-1-al

1-propanal

isobutanal

acetaldehyde

formaldehyde

phytenal

methylglyoxal

(R)-acetoin

diacetyl

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

5,10-methenyltetrahydrofolate mono-L-glutamate

thiamine

L-ascorbate

nicotinate

pyridoxamine

pyridoxal

pyridoxine

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

(R)-NADHX

(S)-NADHX

coenzyme A

(R)-lipoate

hydroxyl radical

monodehydroascorbate radical

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

preQ₀

(indole-3-yl)acetonitrile

(2R)-2-hydroxy-2-methylbutanenitrile

2-hydroxy-2-methylpropanenitrile

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate