an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

5-phospho-β-D-ribosylamine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

(R)-4'-phosphopantothenoyl-L-cysteine

3,4-dihydroxyphenylacetaldehyde

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

propynoate

prop-2-ynal

2-(α-hydroxyethyl)thiamine diphosphate

dimethylsulfoniopropanoate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

2-dehydropantoate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

N-succinyl-L,L-2,6-diaminopimelate

5-amino-6-(D-ribitylamino)uracil

4-acetamidobutanoate

4-acetamidobutanal

methylsalicylate

salicyl alcohol

4-imidazoleacetate

imidazole acetaldehyde

D-gluconate 6-phosphate

4-amino-4-deoxychorismate

6-phospho D-glucono-1,5-lactone

H₂O

CO₂

5-hydroxyindole acetate

carbonic acid

citrate

5-hydroxyindole acetaldehyde

L-selenocystathionine

3-methoxy-4-hydroxyphenylglycolaldehyde

anthranilate

D-glucurono-6,3-lactone

thiamine phosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

xanthine

N-(5-phosphoribosyl)-anthranilate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

indole-3-ethanol

3-phosphooxypyruvate

hydrogen peroxide

L-xylo-hex-3-ulono-1,4-lactone

2-oxovalerate

3-ethylmalate

L-gulono-1,4-lactone

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

isochorismate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

1,4-dihydroxy-2-naphthoate

quinolinate

histidinol

histidinal

N-(2,3-dihydroxybenzoyl)-L-serine trimer

L-histidinol phosphate

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine dimer

imidazole acetol-phosphate

α-D-glucosamine 1-phosphate

prephenate

D-erythro-imidazole-glycerol-phosphate

glycolate

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

oxaloacetate

(L-threonylcarbamoyl)adenylate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

DNA without lesion

arsenite

4-fumaryl-acetoacetate

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

chlorite

O-acetyl-L-serine

hydrogen selenide

β-D-ribosylnicotinate

1-deoxy-L-glycero-tetrulose 4-phosphate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

α, α'-trehalose 6,6'-bismycolate

lipoamide

dihydrolipoamide

S-formylmycothiol

S-(hydroxymethyl)mycothiol

2-phosphoglycolate

N-acetyl-L-glutamate 5-semialdehyde

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

porphobilinogen

L-arginino-succinate

5-aminolevulinate

canavaninosuccinate

O-ureido-L-homoserine

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

L-canavanine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

benzoylsuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

1,4-dihydroxy-2-naphthoyl-CoA

succinate semialdehyde

isopentenyl diphosphate

ethanolamine

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

urea-1-carboxylate

urea

4-hydroxy-2-nonenal

pseudouridine 5'-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

prephytoene diphosphate

6-deoxyerythronolide B

H₂

(4-hydroxyphenyl)acetate

glutathione disulfide

(2R)-2-amino-4-oxopentanoate

(2R,4S)-2, 4-diaminopentanoate

5-aminopentanoate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(S)-4-hydroxy-2-oxohexanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

chlorate

dehydroprephenate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

L-3-cyclohex-2'-enylalanine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

N-acetyl-D-muramate 6-phosphate

isobutanol

N⁵-carboxyaminoimidazole ribonucleotide

4-amino-2-methyl-5-pyrimidinemethanol

glutathioselenol

selenodiglutathione

autoinducer 2

S-ribosyl-L-homocysteine

2-amino-3-carboxymuconate-6-semialdehyde

cyclic-2,3-O-oxalyl-L-threonate

dehydroascorbate (bicyclic form)

ammonia

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

cyclic- 3,4-O-oxalyl-L-threonate

2,3-dioxo-L-gulonate

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

2-carboxy-L-xylonolactone

2-carboxy-L-threo-pentonate

2-iminoacetate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

mercuriphenyl acetate

pseudouridine

α-D-galacturonate 1-phosphate

L-dehydro-ascorbate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

nicotinate adenine dinucleotide

sinapoyl-CoA

sinapate

5-hydroxy-feruloyl-CoA

5-hydroxyferulate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

propionamide

4-guanidinobutanoate

4-guanidinobutyramide

(S)-dihydroorotate

(indol-3-yl)acetamide

acrylate

acrylamide

2-isopropylmaleate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

phosphoenolpyruvate

glycerone phosphate

thiamine diphosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

4'-phosphopantetheine

N-acetylglutamyl-phosphate

3'-phosphoadenylyl-sulfate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

mycothione

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

acetyl phosphate

acetoacetate

ε-caprolactone

cyclohexanone

coproporphyrinogen III

1-phosphatidyl-myo-inositol 2-mannose

1-phosphatidyl-myo-inositol

γ-L-glutamyl 5-phosphate

oxalosuccinate

3-dehydroshikimate

shikimate

β-nicotinate D-ribonucleotide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

3-dehydroquinate

1,6-anhydro-N-acetyl-β-muramate

2-C-methyl-D-erythritol 4-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-oxopropanoate

4-aminobutanoate

carbon monoxide

carbamoyl phosphate

(R)-4'-phosphopantothenate

(R)-pantothenate

orotidine 5'-phosphate

estrone

17β-estradiol

(+)-7-epi-jasmonate

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

cholest-4-en-3-one

cholest-dien-3-one

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oyl-CoA

3-oxocholest-4,24-dien-26-oyl-CoA

3-oxochol-4-en-24-oyl-CoA

3-oxochol-4,22-dien-24-oyl-CoA

22-hydroxy-3-oxochol-4-en-24-oyl-CoA

3-oxo-4,17-pregnadiene-20-carboxyl-CoA

17-hydroxy-3-oxo-4-pregnane-20-carboxyl-CoA

(25S)-3-oxocholest-4-en-26-oate

(25S)-26-oxocholest-4-en-3-one

(25S)-26-hydroxycholest-4-en-3-one

ergosteryl oleate

lanosteryl oleate

cholest-5-en-3-one

cholesterol

ergosterol

lanosterol

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

ethylene glycol

3,4-dihydroxyphenylacetate

3,4-dihydroxymandelate

3,4-dihydroxyphenylglycolaldehyde

enterobactin

myo-inositol

phytate

D-myo-inositol (1,2,4,5,6)-pentakisphosphate

1D-myo-inositol 4-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 5-monophosphate

1-octanol

ethanol

butan-1-ol

methanol

(2E,6E)-farnesol

glycerol

2-iminopropanoate

2-iminobutanoate

2-iminosuccinate

sn-glycero-3-phosphocholine

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

D-alanyl-D-alanine

L-homocysteine

4-methylphenol

betaine aldehyde hydrate

betaine aldehyde

choline

glycine betaine

cadaverine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

ferrichrome

3-dimethylsulfoniopropionaldehyde

dimethyl sulfide

S-(hydroxymethyl)glutathione

glutathione

thiocyanate

mycothiol

S-sulfanylglutathione

3-sulfopyruvate

L-cysteate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

(2E,6E)-farnesyl diphosphate

pristanate

L-α-amino-ε-keto-pimelate

L-glutamine

L-threonine

L-cysteine

L-serine

L-tyrosine

L-asparagine

glycine

L-arginine

L-lysine

L-histidine

L-glutamate

L-aspartate

L-citrulline

L-alanine

L-isoleucine

L-leucine

L-phenylalanine

L-proline

L-methionine

L-valine

L-tryptophan

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

S-sulfo-L-cysteine

L-ornithine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

O-succinyl-L-homoserine

L-4-hydroxyglutamate semialdehyde

L-homoserine

L-glutamate-5-semialdehyde

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

D-ornithine

meso-diaminopimelate

L-selenocysteine

L,L-diaminopimelate

L-cystathionine

L-aspartyl-4-phosphate

N-acetyl-L-ornithine

N-carbamoyl-L-aspartate

D-glutamate

β-alanine

(S)-3-amino-2-methylpropanoate

D-alanine

D-proline

D-aspartate

seleno-L-homocysteine

L-selenomethionine

3-phospho-L-serine

N-acetyl-L-glutamate

O-acetyl-L-homoserine

Fe³⁺

Hg²⁺

Cu²⁺

Fe²⁺

Mg²⁺

Co²⁺

Zn²⁺

Mn²⁺

H⁺

K⁺

ammonium

sulfite

hydrogencarbonate

thiosulfate

superoxide

sulfate

perchlorate

selenite

hydrogensulfite

OH^-

molybdate

nitrite

selenate

chloride

bromide

phosphate

triphosphate

diphosphate

trimethyl sulfonium

thiamine

L-ascorbate

riboflavin

nicotinate

nicotinamide

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

N¹⁰-formyldihydrofolate

all-trans-retinol

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine

pyridoxal

pyridoxine

FMN

FMNH₂

FADH₂

FAD

NADPH

NADH

NADP⁺

NAD⁺

menaquinol-7

menaquinol-6

menaquinol-8

demethylmenaquinol-8

demethylmenaquinol-7

demethylmenaquinol-6

(R)-NADHX

(S)-NADHX

coenzyme A

molybdopterin

MoO₂-molybdopterin cofactor

hydrogen cyanide

preQ₀

acrylonitrile

(S)-3-hydroxy-isobutanoate

5,10-methenyltetrahydrofolate mono-L-glutamate

hydroxyl radical

monodehydroascorbate radical

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

mycothiol-bimane conjugate

1-oleoyl-2-lyso-glycerone phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

3-phospho-D-glyceroyl-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

2-chloroacetate

Hg⁰

oxygen

hydrogen sulfide

protoporphyrin IX

Mg-protoporphyrin

uroporphyrinogen-III

magnesium-protoporphyrin IX 13-monomethyl ester

coproporphyrinogen I

uroporphyrinogen-I

protoporphyrinogen IX

(Z,Z)-biliverdin-IX α

siroheme

hemin

protoheme

protochlorophyllide a

chlorophyllide a

3,8-divinyl protochlorophyllide a

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

cob(II)yrinate a,c-diamide

cobyrinate

cobalt-precorrin-5A

cobalt-precorrin-4

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-8

cobalt-precorrin-7

cobalt-sirohydrochlorin

cobalt-precorrin-3

cobalt-factor III

cob(II)yrinate c-monoamide

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

4-hydroxybenzoate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

benzene

monobromobimane

2-[hydroperoxy(4-hydroxyphenyl)methyl]-6-hydroxy-1-benzofuran-3-one

6-hydroxy-2-[hydroxy-(4-hydroxyphenyl)methyl]-1-benzofuran-3-one

6-hydroxy-2-(6-oxo-1-oxaspiro[2.5]octa-4,7-dien-2-yl)-1-benzofuran-3-one

salicylate

4-coumarate

benzoate

4-aminobenzoate

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

6,7-dehydrobaicalein

baicalein

trans-caffeate

benzaldehyde

vanillyl mandelate

(3E)-tetradec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA

5-cis, 7-trans-tetradecadienoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

6-cis-tridecenoyl-CoA

(5Z)-tetradecenoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

6-trans-tridecenoyl-CoA

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3R)-hydroxy- 5-cis, 7-trans-tetradecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy-5-trans-dodecenoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1,2-dibutyrin

tributyrin

α, α'-trehalose 6-α-mycolate

trehalose-cis-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

6-O-α-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

di-trans,octa-cis-undecaprenol

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

15-cis-phytoene

all-trans-phytoene

all-trans-retinyl palmitate

erythronolide B

erythromycin D

3-α-mycarosylerythronolide B

betanidin quinone

betanidin

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA

(2E,5Z)-tetradecenoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

methylacrylyl-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

acetyl-CoA

dihomo γ-linolenoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

(E)-glutaconyl-CoA

isobutanoyl-CoA

phenylacetyl-CoA

4-chloro-3-hydroxybutyryl-CoA

4-chloro-crotonyl-CoA

chloroethylmalonyl-CoA

2-methylbutanoyl-CoA

trans-caffeoyl-CoA

malonyl-CoA

3'-dephospho-CoA

succinyl-CoA

2-methylacetoacetyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

octanoyl-CoA

decanoyl-CoA

lauroyl-CoA

hexanoyl-CoA

cerotoyl-CoA

pristanoyl-CoA

palmitoyl-CoA

stearoyl-CoA

propanoyl-CoA

butanoyl-CoA

2-carboxy-cerotoyl-CoA

(Z)-15-tetracosenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyhexadecanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxodecanoyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxohexanoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dodec-2-enoyl-CoA

crotonyl-CoA

5-chloro-5-deoxy-D-ribono-γ-lactone

L-galactono-1,4-lactone

D-glucono-1,5-lactone

D-gluconate

L-gulonate

aldehydo-L-galactonate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

UDP-α-D-galactose

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

5-phospho-α-D-ribose 1-diphosphate

α-D-ribose-1-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

UDP-α-D-glucose

ADP-α-D-glucose

dTDP-α-D-glucose

GDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-α-D-galacturonate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-glucosamine

ADP-D-ribose

GDP-α-D-mannose

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-mycarose

dTDP-D-desosamine

dTDP-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

aldehydo-D-galacturonate

maltotriose

sucrose

α,α-trehalose

maltopentaose

maltohexaose

maltotetraose

maltoheptaose

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycolaldehyde

L-glyceraldehyde

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-glucopyranose

α-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

5-chloro-5-deoxy-D-ribose

a coenzyme-A group

methylglyoxal

(R)-acetoin

diacetyl

(2E,6E)-farnesal

fluoroacetaldehyde

(S)-lactaldehyde

1-octanal

isobutanal

acetaldehyde

formaldehyde

butan-1-al

1-propanal

phytenal

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

acetamide

bimane N-acetyl-L-cysteinyl conjugate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

linoleate

α-linolenate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

palmitate

oleate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(3E,5Z)-tetradecadienoate

stearate

di-homo-γ-linolenate

phytenate

(15Z)-tetracosenoate

octanoate

decanoate

(2E,6E)-farnesoate

butanoate

cis-2-methylaconitate

(2S,3S)-2-methylcitrate

cis-aconitate

(2R,3S)-2-methylisocitrate

D-threo-isocitrate

2-oxoglutarate

pyruvate

2-oxobutanoate

glyoxylate

5-chloro-4-hydroxy-2-oxopentanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

formate

acetate

propanoate

(R)-lactate

(S)-lactate

chorismate

fumarate

succinate

(S)-malate

D-glucarate

5-chloro-5-deoxy-D-ribonate

fluoroacetate

orotate

(R)-pantoate

aldehydo-D-glucuronate

(S)-1-pyrroline-5-carboxylate

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5'-deoxyadenosine

2'-deoxyguanosine

ADP

ATP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

cyclic-AMP

XMP

IMP

GMP

dGMP

dAMP

isoguanine

8-oxo-dGTP

8-oxo-GTP

pppGpp

ppGpp

dGDP

dADP

AMP

GTP

adenylo-succinate

dGTP

ITP

IDP

dATP

dITP

dIDP

GDP

2'-deoxyinosine

2'-deoxyadenosine

hypoxanthine

guanosine

xanthosine

inosine

adenosine

2'-deoxyuridine

2'-deoxycytidine

thymidine

uridine

cytidine

5'-deoxy-5'-fluoroadenosine

adenine

guanine

preQ₁

uracil

dUDP

dCDP

dTDP

dTTP

dUTP

dCTP

dUMP

dTMP

dCMP

β-nicotinamide D-ribonucleotide

CMP

UMP

UDP

CDP

CTP

UTP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic pyranopterin phosphate

molybdopterin adenine dinucleotide

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

7,8-dihydropteroate

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

salinosporamide A

sirohydrochlorin

precorrin-2

precorrin-1