an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-carboxy-L-threo-pentonate

2-carboxy-L-xylonolactone

2,3-dioxo-L-gulonate

cyclic- 3,4-O-oxalyl-L-threonate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

dehydroascorbate (bicyclic form)

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

cyclic-2,3-O-oxalyl-L-threonate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

4-oxoglutaramate

maltol

L-dehydro-ascorbate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

pyruvic oxime

L-xylo-hex-3-ulono-1,4-lactone

L-gulono-1,4-lactone

α-D-galacturonate 1-phosphate

2-iminoacetate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

quinolinate

selenodiglutathione

glutathioselenol

N⁵-carboxyaminoimidazole ribonucleotide

2-dehydropantoate

chlorate

1-(methylsulfanyl)xylulose 5-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

isobutanol

2-dehydro-3-deoxy-D-gluconate 6-phosphate

propanoyl phosphate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

acetoacetate

urea

4-aminobutanoate

L-3-cyclohex-2'-enylalanine

3-[(1S)-cyclohex-3-en-1-yl)]-2-oxopropanoate

3-(cyclohexa-1,3-dien-1-yl)-2-oxopropanoate

dehydroprephenate

glutathione disulfide

ammonia

hydroxylamine

acrylamide

acrylate

propionamide

4-guanidinobutyramide

4-guanidinobutanoate

(indol-3-yl)acetamide

3-mercaptopyruvate

4-acetamidobutanal

4-acetamidobutanoate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

1,6-anhydro-N-acetyl-β-muramate

N-ethylmaleimide

N-ethylsuccinimide

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

S-(hydroxymethyl)mycothiol

S-formylmycothiol

1,4-dihydroxy-2-naphthoate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

2-maleylacetate

ethanolamine

arsenite

prephytoene diphosphate

carbonic acid

2-oleoylglycerol

urea-1-carboxylate

(L-threonylcarbamoyl)adenylate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

DNA without lesion

β-D-ribosylnicotinate

phthalate

2,2'-disulfonyl azobenzene

3-[(4-amino-6-chloro-1,3,5-triazin-2-yl)amino]benzenesulfonate

chlorite

H₂

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

acetyl phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-phospho-β-D-ribosylamine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

dihydroxyacetone

2-phosphoglycolate

glycolate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

3'-phosphoadenylyl-sulfate

γ-L-glutamyl 5-phosphate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

(R)-4'-phosphopantothenoyl-L-cysteine

orotidine 5'-phosphate

(S)-dihydroorotate

3-dehydroquinate

3-dehydroshikimate

1-phosphatidyl-myo-inositol

1-phosphatidyl-myo-inositol 2-mannose

mycothione

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

3-deoxy-D-arabino-heptulosonate 7-phosphate

5,6-dimethylbenzimidazole

β-nicotinate D-ribonucleotide

α-ribazole 5'-phosphate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

citrate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

2-(α-hydroxyethyl)thiamine diphosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinylbenzoate

xanthine

hydrogen selenide

O-acetyl-L-serine

α-D-glucosamine 1-phosphate

(R)-pantothenate

(R)-4'-phosphopantothenate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

selenophosphate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

urocanate

4-imidazolone-5-propanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

3-phosphooxypyruvate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

isochorismate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

thiamine phosphate

thiamine diphosphate

4'-phosphopantetheine

N-acetyl-D-muramate 6-phosphate

2-amino-2-deoxy-D-gluconate 6-phosphate

N-acetyl-L-glutamate 5-semialdehyde

carbamoyl phosphate

O-ureido-L-homoserine

canavaninosuccinate

L-canavanine

L-arginino-succinate

dethiobiotin

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

nicotinate adenine dinucleotide

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

dihydrolipoamide

lipoamide

S-ribosyl-L-homocysteine

autoinducer 2

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

(S)-4-amino-5-oxopentanoate

preuroporphyrinogen

5-aminolevulinate

porphobilinogen

hydrogen peroxide

prephenate

enol-phenylpyruvate

glycerone phosphate

succinate semialdehyde

N-(5-phosphoribosyl)-anthranilate

anthranilate

4-amino-4-deoxychorismate

phosphoenolpyruvate

5-enolpyruvoyl-shikimate 3-phosphate

shikimate

shikimate 3-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

(S)-2-acetolactate

oxaloacetate

oxalosuccinate

prenyl diphosphate

coproporphyrinogen III

CO₂

formamide

isopentenyl diphosphate

H₂O

(2E,6E)-farnesyl diphosphate

pristanate

DNA with lesion

phenylacetate

ethylphosphate

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

Mg-protoporphyrin

protoheme

hydrogen cyanide

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

uroporphyrinogen-III

protoporphyrinogen IX

oxygen

hydrogen sulfide

2-chloroacetate

sn-glycerol 3-phosphate

2,3-diphospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2-phospho-D-glycerate

3-phospho-D-glycerate

Reactive Blue 5

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

1-oleoyl-2-lyso-glycerone phosphate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

superoxide

monodehydroascorbate radical

5,10-methenyltetrahydrofolate mono-L-glutamate

(S)-3-hydroxy-isobutanoate

acrylonitrile

preQ₀

coenzyme A

tetrahydropteroyl tri-L-glutamate

5,6,7,8-tetrahydrofolate

5-methyltetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

7,8-dihydrofolate monoglutamate

FMNH₂

FADH₂

FMN

FAD

(R)-NADHX

(S)-NADHX

demethylmenaquinol-8

menaquinol-8

NADP⁺

NAD⁺

NADPH

NADH

glycine betaine

nicotinamide

riboflavin

nicotinate

thiamine

L-ascorbate

biotin

pyridoxal

pyridoxal 5'-phosphate

pyridoxine

pyridoxine 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

trimethyl sulfonium

sulfate

sulfite

selenite

selenate

selenide

thiosulfate

hydrogensulfite

hydrogencarbonate

perchlorate

molybdate

chloride

phosphate

diphosphate

Fe³⁺

H⁺

K⁺

ammonium

Co²⁺

Mo²⁺

Cu²⁺

Fe²⁺

Cd²⁺

Mg²⁺

Zn²⁺

Mn²⁺

Ni²⁺

S-(hydroxymethyl)glutathione

dimethyl sulfide

glutathione

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

L-cysteate

3-sulfopyruvate

thiocyanate

mycothiol

methanethiol

ferrichrome

betaine aldehyde

choline

2-iminopropanoate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

cadaverine

putrescine

spermidine

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

sn-glycero-3-phosphocholine

glycerol

(3R)-linalool

(3S)-linalool

methanol

ethanol

myo-inositol

1D-myo-inositol 5-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 3-monophosphate

1D-myo-inositol 4-monophosphate

2,3-dihydroxybenzoate

enterobactin

lanosterol

chenodeoxycholate

cholate

ergosterol

lanosteryl oleate

ergosteryl oleate

(indol-3-yl)acetate

chloroethylmalonyl-CoA

4-chloro-crotonyl-CoA

4-chloro-3-hydroxybutyryl-CoA

5-chloro-4-hydroxy-2-oxopentanoate

5-chloro-5-deoxy-D-ribonate

5-chloro-5-deoxy-D-ribose

5-chloro-5-deoxy-D-ribono-γ-lactone

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

fluoroacetaldehyde

fluoroacetate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

acetamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

L-α-amino-ε-keto-pimelate

L-serine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

L-glutamate

L-histidine

L-lysine

L-arginine

L-proline

L-leucine

L-glutamine

L-alanine

glycine

L-aspartate

L-cysteine

L-asparagine

L-threonine

L-tyrosine

L-phenylalanine

L-tryptophan

D-aspartate

D-alanine

seleno-L-homocysteine

L-selenomethionine

L-saccharopine

L-aspartyl-4-phosphate

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

O-acetyl-L-homoserine

3-phospho-L-serine

L-valine

L-isoleucine

L-selenocysteine

L-methionine

L-isoglutamine

L,L-diaminopimelate

L-ornithine

L-citrulline

L-glutamate-5-semialdehyde

S-sulfo-L-cysteine

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-homocysteine

S-adenosyl-L-homocysteine

L-homoserine

S-adenosyl-L-methionine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

chorismate

fumarate

succinate

(S)-malate

(R)-lactate

(S)-lactate

acetate

pyruvate

formate

propanoate

butanoate

decanoate

octanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

salicylate

4-aminobenzoate

benzoate

palmitate

(15Z)-tetracosenoate

phytenate

oleate

(3E,5Z)-tetradecadienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

α-linolenate

linoleate

apo-4'-lycopenoate

D-gluconate

(R)-pantoate

orotate

aldehydo-D-glucuronate

aldehydo-D-galacturonate

(S)-1-pyrroline-5-carboxylate

cis-aconitate

D-threo-isocitrate

diacetyl

(R)-acetoin

methylglyoxal

salicylaldehyde

glycolaldehyde

phytenal

1-octanal

isobutanal

formaldehyde

acetaldehyde

benzaldehyde

D-glyceraldehyde

β-D-galactopyranose

α-D-galactopyranose

α-D-glucopyranose

β-D-glucopyranose

β-D-ribopyranose

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

a coenzyme-A group

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-3-dehydro-6-deoxy-α-D-glucopyranose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-3-N-methylamino-4-oxo-2,3,6-trideoxy-α-D-glucose

dTDP-3-amino-4-dehydro-2,3,6-trideoxy-α-D-glucose

dTDP-3-N,N-dimethylamino-4-oxo-2,3,6-trideoxy-α-D-glucose

dTDP-L-megosamine

dTDP-3-N,N-dimethylamino-4-oxo-2,3,6-trideoxy-α-L-glucose

dTDP-2,6-dideoxy-D-glycero-hex-2-enos-4-ulose

dTDP-3,4-didehydro-2,6-dideoxy-α-D-glucose

dTDP-2,3,6-trideoxy-3-C-methyl-3-amino-4-dehydro-α-D-glucose

dTDP-2,3,6-trideoxy-3-C-methyl-3-amino-4-dehydro-α-D-gulose

dTDP-β-L-4-epi-vancosamine

dTDP-4-dehydro-β-L-rhamnose

dTDP-viosamine

dTDP-4-dehydro-6-deoxy-α-D-gulose

dTDP-6-deoxy-α-D-allose

dTDP-3-amino-3,6-dideoxy-α-D-glucopyranose

dTDP-3-acetamido-3,6-dideoxy-α-D-glucopyranose

dTDP-N-acetylviosamine

dTDP-β-L-rhamnose

dTDP-α-D-glucose

GDP-α-D-glucose

GDP-α-D-mannose

ADP-α-D-glucose

UDP-α-D-galacturonate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

sucrose 6^F-phosphate

α,α-trehalose 6-phosphate

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

α-D-galactose 6-phosphate

β-D-galactose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-galactose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-fructofuranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-D-glucosamine

maltotetraose

maltotriose

maltoheptaose

maltohexaose

maltopentaose

sucrose

α,α-trehalose

L-gulonate

aldehydo-L-galactonate

isovaleryl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-methylbutanoyl-CoA

2-methylacetoacetyl-CoA

phenylacetyl-CoA

isobutanoyl-CoA

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

4-hydroxybenzoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

chenodeoxycholoyl-CoA

choloyl-CoA

succinyl-CoA

3'-dephospho-CoA

α-linolenoyl-CoA

linoleoyl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

acetyl-CoA

crotonyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

phytenoyl-CoA

(2E)-octadec-2-enoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

propanoyl-CoA

palmitoyl-CoA

(Z)-15-tetracosenoyl-CoA

cerotoyl-CoA

2-carboxy-cerotoyl-CoA

pristanoyl-CoA

decanoyl-CoA

octanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

D-glucono-1,5-lactone

L-galactono-1,4-lactone

cis-dienelactone

trans-dienelactone

tributyrin

1,2-dibutyrin

5-deoxy-dihydrokalafungin

(S)-DNPA

2-((1R,3S),-1',9'-dihydroxy-1'-methyl-10'-oxo-3',4',5',10'-tetrahydro-1H-benzo[g]isochromen-3'-yl)acetate

(S)-4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-hydroxybutanoate

4-(3'-acetyl-5'-hydroxy-4'-oxo-1',4'-dihydronapthalen-2'-yl)-3-oxobutanoate

ferric-enterobactin complex

actinorhodin intermediate

actinorhodin

dihydrokalafungin

apo-4'-lycopenal

15-cis-phytoene

all-trans-phytoene

geranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

dioleoyl phosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

urate

4-hydroxybenzoate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-methylphenol

2-iminosuccinate

2-iminobutanoate

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydropteroate

adenine

guanine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

guanosine

xanthosine

adenosine

inosine

hypoxanthine

dAMP

dGMP

dIMP

dITP

dATP

dGTP

dIDP

dADP

dGDP

XTP

GTP

ITP

ATP

GDP

IDP

ADP

AMP

GMP

IMP

XMP

salinosporamide A

cytosine

dCMP

dCTP

dTDP

dUTP

CTP

dUMP

dTMP

dCDP

CDP

dUDP

UDP

dTTP

UTP

uracil

cytidine

uridine

CMP

UMP

preQ₁

N3-methylcytosine

N¹-methyladenine

N¹-ethyladenine

precorrin-3A

precorrin-3B

precorrin-1

precorrin-2

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

N-acetyl-L-glutaminyl-L-glutamine

N-acetyl-L-glutaminyl-L-glutamine amide

D-alanyl-D-alanine