an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

α-D-glucosamine 1-phosphate

acetoacetate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

chloroacetaldehyde

ethanolamine

dihydroxyacetone

(L-threonylcarbamoyl)adenylate

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

hydroxypyruvate

deoxycholoyl-CoA

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

creatinine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

L-histidinol phosphate

histidinol

4-acetamidobutanal

4-acetamidobutanoate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

quinolinate

DNA without lesion

dimethyl sulfoxide

4'-phosphopantetheine

(4S)-4-hydroxy-2-oxoheptanedioate

succinate semialdehyde

glycerone phosphate

citrate

L-selenocystathionine

ammonia

selenophosphate

H₂

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

phosphoenolpyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

γ-L-glutamyl 5-phosphate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(2S)-2-isopropylmalate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

hydrogen selenide

O-acetyl-L-serine

(S)-mandelate

(R)-mandelate

muconolactone

(+)-muconolactone

cis,cis-muconate

N-Formyl-L-kynurenine

3''-adenylylstreptomycin

N-(5-phosphoribosyl)-anthranilate

anthranilate

mesaconate

oxaloacetate

5-dehydro-4-deoxy-D-glucarate

2-dehydro-3-deoxy-D-gluconate

4-amino-4-deoxychorismate

3-deoxy-D-manno-octulosonate 8-phosphate

3-deoxy-α-D-manno-2-octulosonate

coproporphyrinogen III

CO₂

α-D-glucopyranosyl-diphosphoundecaprenol

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

glycolate

hydrogen peroxide

H₂O

hydroxylamine

ectoine

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

5-hydroxyindole thiazolidine carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

pyruvic oxime

4-amino-2-methyl-5-pyrimidinemethanol

2-amino-3-carboxymuconate-6-semialdehyde

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

2-hydroxy-6-oxocyclohexane-1-carbonyl-CoA

cyclohexane-1-carbonyl-CoA

cyclohexane-1-carboxylate

3-oxopimeloyl-CoA

3-hydroxypimeloyl-CoA

6-oxocyclohex-1-ene-1-carbonyl-CoA

6-hydroxycyclohex-1-ene-1-carbonyl-CoA

crotonate

(S)-ureidoglycolate

2-iminoacetate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

N⁵-carboxyaminoimidazole ribonucleotide

S-ribosyl-L-homocysteine

autoinducer 2

1-(methylsulfanyl)xylulose 5-phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

dialurate

adenosine 5'-phosphosulfate

xanthine

3,5-dihydro-4H-imidazol-4-one

4-aminoimidazole

5-aminoimidazole-4-carboxylate

5-ureidoimidazole-4-carboxylate

2-(α-hydroxyethyl)thiamine diphosphate

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

dihydrophloroglucinol

gallate

poly(ribitol phosphate)

O-D-alanyl-poly(ribitol phosphate)

4-(β-D-ribofuranosyl)aminobenzene-5'-phosphate

4-aminobutanoate

(R)-pantothenate

4-pyridoxolactone

(R)-1-amino-2-propanol O-2-phosphate

4-guanidinobutyramide

acetyl phosphate

orotidine 5'-phosphate

(S)-dihydroorotate

1,4-dihydroxy-2-naphthoate

thiamine diphosphate

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

L-arginino-succinate

canavaninosuccinate

O-ureido-L-homoserine

pyrogallol

1,2,3,5-tetrahydroxybenzene

phloroglucinol

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

L-canavanine

oxalosuccinate

(S)-2-amino-6-oxohexanoate

carboxynorspermidine

norspermidine

3-phosphooxypyruvate

urea

(4-hydroxyphenyl)acetate

(S)-2,3,4,5-tetrahydrodipicolinate

enol-phenylpyruvate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

histidinal

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

(lipoyl)adenylate

3-β-hydroxyandrost-5-en-17-one 3-sulfate

estrone 3-sulfate

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

(E)-2-benzylidenesuccinyl-CoA

2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA

2,3-didehydroadipyl-CoA

(E)-4-coumaroyl-CoA

dihydrolipoamide

lipoamide

S-methyl-5'-thioadenosine

tartronate semialdehyde

carbonic acid

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

carbon tetrachloride

carbon monoxide

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

butanoyl phosphate

shikimate

3-dehydroquinate

3-dehydroshikimate

cyclohex-1,5-diene-1-carbonyl-CoA

prephenate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

S-adenosyl 3-(methylsulfanyl)propylamine

isopentenyl diphosphate

preuroporphyrinogen

porphobilinogen

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

5-hydroxytryptophol

5-hydroxyindole acetaldehyde

indole-3-glycol

indole-3-glycol aldehyde

2-methylbutanol

2-methylbutanal

isobutanol

3-methoxy-4-hydroxyphenylglycolaldehyde

3-methylbutanol

3-methylbutanal

2-phenylethanol

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

carbamoyl phosphate

(5S)-5-benzyl-hydantoin

(5R)-5-benzyl-hydantoin

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

2-dehydropantoate

3-ureidopropanoate

5-oxo-L-proline

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

cyanophycin primer-L-aspartate

cyanophycin primer

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

DNA with lesion

phenylacetate

ethylphosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(I)alamin

adenosylcobalamin

cobalt-factor III

cobalt-precorrin-3

cobalt-precorrin-7

cobalt-precorrin-8

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

cobalt-precorrin-4

cobalt-precorrin-5A

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

3,8-divinyl protochlorophyllide a

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

chlorophyllide a

protochlorophyllide a

cobalt-sirohydrochlorin

cobalt-precorrin-2

adenosylcobyrate

Mg-protoporphyrin

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

protoheme

N₂

protoporphyrinogen IX

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

uroporphyrinogen-III

siroheme

hydrogen sulfide

oxygen

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

(R)-glycerate

2,3-diphospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

1-oleoyl-2-lyso-glycerone phosphate

(S)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

nitric oxide

dichlorocarbene

superoxide

trichloromethyl radical

5,10-methenyltetrahydrofolate mono-L-glutamate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(R)-2-hydroxyglutarate

preQ₀

coenzyme M

methyl-CoM

coenzyme A

(R)-lipoate

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

5,6,7,8-tetrahydrofolate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl mono-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

10-formyl-tetrahydrofolate mono-L-glutamate

5,10-methylenetetrahydropteroyl mono-L-glutamate

(6S)-5-formyl-tetrahydrofolate mono-L-glutamate

N⁵-methyltetrahydromethanopterin

tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

glycine betaine

FMNH₂

FMN

FAD

FADH₂

(R)-NADHX

(S)-NADHX

demethylmenaquinol-7

demethylmenaquinol-8

ubiquinol-8

menaquinol-7

menaquinol-8

3-demethylubiquinol-8

NADP⁺

NAD⁺

NADPH

NADH

riboflavin

nicotinamide

thiamine

nicotinate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine

pyridoxine

pyridoxal

(2E,6E)-farnesyl diphosphate

H⁺

ammonium

K⁺

Na⁺

Ni²⁺

Mn²⁺

Co²⁺

Mg²⁺

Fe²⁺

trimethyl sulfonium

hydrogencarbonate

sulfite

nitrite

thiosulfate

sulfate

molybdate

selenide

trithionate

OH^-

hydrogensulfite

nitrate

phosphate

triphosphate

diphosphate

chloride

dimethyl sulfide

S-methyl-L-methionine

methionol

3-(methylsulfanyl)propanal

glutathione

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

sulfoacetaldehyde

methanethiol

ferrichrome

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

putrescine

spermidine

choline

glycerol

ethanol

methanol

butan-1-ol

propan-1-ol

phytol

2,3-dihydroxybenzoate

protocatechuate

3,4-dihydroxyphenylacetate

3,4-dihydroxyphenylglycol

3,4-dihydroxyphenylglycolaldehyde

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

deoxycholate

estrone

3-β-hydroxyandrost-5-en-17-one

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

allantoate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

(S)-(+)-allantoin

isopenicillin N

penicillin K

chorismate

D-galactarate

succinate

L-aspartate

fumarate

(S)-malate

3-(carbamoylamino)-2-methylpropanoate

(S)-lactate

(R)-lactate

formate

pyruvate

acetate

propanoate

butanoate

octanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

2-oxobutanoate

2-oxoglutarate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

salicylate

benzoate

4-aminobenzoate

palmitate

phytenate

(3E,5Z)-tetradecadienoate

apo-4'-lycopenoate

leukotriene-D4

leukotriene-E4

D-mannonate

D-gluconate

orotate

(R)-pantoate

D-tagaturonate

aldehydo-D-galacturonate

(S)-1-pyrroline-5-carboxylate

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

L-serine

D-serine

creatine

β-alanine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

D-glutamate

L-glutamate

L-lysine

L-arginine

L-histidine

glycine

L-proline

L-leucine

L-glutamine

L-alanine

L-asparagine

L-threonine

L-cysteine

L-tyrosine

L-tryptophan

D-alanine

D-aspartate

seleno-L-homocysteine

L-saccharopine

L-aspartyl-4-phosphate

sarcosine

(2S, 3S)-3-methylaspartate

N-formimino-glycine

N-carbamoyl-L-aspartate

N-carbamoylglycine

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

O-acetyl-L-homoserine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-isoleucine

L-selenocysteine

L-valine

L-methionine

L-cystathionine

L-ornithine

L,L-diaminopimelate

L-citrulline

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

S-sulfo-L-cysteine

L-homocysteine

S-adenosyl-L-methionine

hypoglycin A

L-canaline

O-succinyl-L-homoserine

meso-diaminopimelate

cis-homoaconitate

(2R)-homocitrate

cis-aconitate

D-threo-isocitrate

diacetyl

methylglyoxal

salicylaldehyde

glycolaldehyde

phytenal

formaldehyde

1-octanal

acetaldehyde

butan-1-al

1-propanal

isobutanal

(S)-lactaldehyde

benzaldehyde

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

a thiol group

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

CMP-3-deoxy-β-D-manno-octulosonate

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-α-D-glucose

GDP-α-D-mannose

ADP-α-D-glucose

ADP-D-ribose

cyclic ADP-ribose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

sucrose 6^F-phosphate

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (mycobacteria)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (mycobacteria)

a peptidoglycan with L,D cross-links (mycobacteria)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

streptomycin

4-phospho-D-erythronate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-mannopyranose 6-phosphate

α-D-mannopyranose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-fructofuranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

maltotetraose

maltotriose

maltopentaose

maltoheptaose

maltohexaose

sucrose

D-altronate

γ-butyrobetainyl-CoA

crotonobetainyl-CoA

succinyl-CoA

malonyl-CoA

3'-dephospho-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

2-methylbutanoyl-CoA

phenylacetyl-CoA

glutaryl-CoA

isobutanoyl-CoA

(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA

(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA

CoA-disulfide

methylacrylyl-CoA

(2E,5Z)-tetradecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

2-trans,6-cis-tridecadienoyl-CoA

(3R)-hydroxy, 6-cis-tridecenoyl-CoA

(3R)-hydroxy, 4-trans-undecenoyl-CoA

(3E)-undec-2-enoyl-CoA

(3R)-hydroxy-undecanoyl-CoA

2-trans-nonenoyl-CoA

(3R)-hydroxy-nonanoyl-CoA

2-trans-6-trans-tridecadienoyl-CoA

(3R)-hydroxy, 6-trans-tridecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

benzoyl-CoA

crotonyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-oct-2-enoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxohexanoyl-CoA

3-oxooctanoyl-CoA

3-oxodecanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxy-(5Z)-tetradecenoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

butanoyl-CoA

propanoyl-CoA

palmitoyl-CoA

octanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(R)-methylmalonyl-CoA

D-glucono-1,5-lactone

achromobactin

apo-4'-lycopenal

geranyl diphosphate

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

dioleoyl phosphatidate

1-oleoyl-sn-glycerol 3-phosphate

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

8-hydroxypurine

6,8-dihydroxypurine

urate

4-hydroxybenzoate

2-[(1R,6S)-1,6-dihydroxycyclohexa-2,4-dien-1-yl]acetyl-coA

4-tyrosol

3-methoxy-4-hydroxyphenylglycol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

phenol

4-methylphenol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

reduced riboflavin

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropterin-6-ylmethyl-4-(β-D-ribofuranosyl)aminobenzene 5'-phosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

adenine

guanine

2'-deoxyguanosine

2'-deoxyadenosine

guanosine

adenosine

hypoxanthine

purine

dIMP

dAMP

dGMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

GTP

XTP

ITP

ATP

GDP

ADP

IDP

XMP

IMP

AMP

GMP

dCTP

dUTP

uracil

UDP

CTP

UTP

dTTP

dUDP

dTDP

dCMP

dUMP

dTMP

dCDP

CDP

5,6-dihydrothymine

5,6-dihydrouracil

cytidine

uridine

2'-deoxycytidine

2'-deoxyuridine

thymidine

thymine

UMP

CMP

preQ₁

precorrin-7

precorrin-3A

precorrin-5

precorrin-3B

precorrin-4

precorrin-6B

precorrin-6A

precorrin-8x

precorrin-1

precorrin-2

sirohydrochlorin

hydantoin

adenylo-succinate

cyclic-AMP

5'-deoxyadenosine

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

pppGpp

ppGpp

reduced β-nicotinamide D-ribonucleotide

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cyclic di-3',5'-guanylate

hypoglycin B

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate