an oxidized electron donor
a reduced electron donor
a deaminated amino group acceptor
an aminated amino group acceptor
Charged-LEU-tRNAs
LEU-tRNAs
a 2-oxo acid
an amino acid
an acyl-CoA
a carboxylate
an oxidized ferredoxin [iron-sulfur] cluster
a reduced ferredoxin [iron-sulfur] cluster
NAD(P)H
NAD(P)+
an L-tyrosyl-[tRNAtyr]
a tRNAtyr
(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde
4α,14α-dimethyl-porifersta-8,25(27)-dienol
2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate
4-methylcyclohex-1,5-diene-1-carbonyl-CoA
isoshowacene
2-hydroxyhexadecanal
16-sinapoyloxypalmitate
3-methylquinolin-2-ol
(22R)-hydroxycholesterol
N-(2-methylpropyl)hydroxylamine
chloroeremomycin
3-hydroxy-3-methylbutanoate
2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tetracyclic spinosyn pseudoaglycone
rhamnosyl tricyclic spinosyn pseudoaglycone
spinosyn tricyclic macrolactone
11-dehydro-15-oxo spinosyn macrolactone
15-oxo spinosyn macrolactone
spinosyn macrolactone
diethylamine N-oxide
triethylamine N-oxide
UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate
nitroxyl
trans,octacis-decaprenylphospho-β-D-arabinofuranose
1,3-dihydro-2H-imidazol-2-one
2-phenylethyl β-D-glucopyranoside
formyl hopane
ribosyl hopane
adenosyl hopane
(2Z)-2-hydroxypenta-2,4-dienoate
(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate
(2Z)-2,4-dihydroxypent-2-enoate
(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA
(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA
(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA
(+)-3'-hydroxylarreatricin
(+)-larreatricin
2-trans,4-trans-xanthoxin
hydrogen peroxide
4-imidazolone-5-propanoate
2-dehydro-3-deoxy-D-gluconate
orotidine 5'-phosphate
urea
2-dehydro-3-deoxy-D-gluconate 6-phosphate
N-acetyl-L-glutamate 5-semialdehyde
N-succinyl-L,L-2,6-diaminopimelate
N-succinyl-2-amino-6-ketopimelate
selenophosphate
α-D-galactosyl-diphosphoundecaprenol
shikimate 3-phosphate
5-enolpyruvoyl-shikimate 3-phosphate
prephenate
3-deoxy-D-arabino-heptulosonate 7-phosphate
dihydroxyacetone
2-phenylethanol
2-methylbutanol
2-methylbutanal
3-methylbutanol
3-methylbutanal
isobutanol
indole-3-glycol
indole-3-glycol aldehyde
3-methoxy-4-hydroxyphenylglycolaldehyde
5-hydroxytryptophol
5-hydroxyindole acetaldehyde
acetyl phosphate
citrate
3-methyl-2-oxobutanoate
4-methyl-2-oxopentanoate
(S)-3-methyl-2-oxopentanoate
(S)-dihydroorotate
oxalate
hydrogenobyrinate
hydrogenobyrinate a,c-diamide
imidazole acetol-phosphate
L-histidinol phosphate
xanthine
carbon monoxide
phosphoenolpyruvate
α-D-glucosamine 1-phosphate
oxaloacetate
2-C-methyl-D-erythritol 4-phosphate
2-C-methyl-D-erythritol-2,4-cyclodiphosphate
glycerone phosphate
5-amino-6-(D-ribitylamino)uracil
5-amino-6-(5-phospho-D-ribitylamino)uracil
2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
5-amino-6-(5-phospho-D-ribosylamino)uracil
(R)-pantothenate
(R)-4'-phosphopantothenate
S-adenosyl 3-(methylsulfanyl)propylamine
S-methyl-5'-thioadenosine
5,6-dimethylbenzimidazole
β-nicotinate D-ribonucleotide
α-ribazole 5'-phosphate
(R)-1-aminopropan-2-ol
(R)-1-amino-2-propanol O-2-phosphate
CO2
3-deoxy-α-D-manno-2-octulosonate
H2O
D-erythro-imidazole-glycerol-phosphate
histidinol
histidinal
shikimate
3-dehydroshikimate
3-dehydroquinate
N1-(5-phospho-β-D-ribosyl)glycinamide
N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide
(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate
2-iminoacetate
formamide
carbamoyl phosphate
1-deoxy-L-glycero-tetrulose 4-phosphate
acetoacetate
H2
α-ribazole
dialurate
ammonia
urea-1-carboxylate
2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA
hydroxylamine
DNA without lesion
cyclohex-1,5-diene-1-carbonyl-CoA
N2-succinylglutamate
β-D-ribosylnicotinate
β-D-fructose 2,6-bisphosphate
5-aminopentanoate
dihydrolipoate
2-O-(6-phospho-α-D-mannosyl)-D-glycerate
7,8-didemethyl-8-hydroxy-5-deazariboflavin
(2S)-lactyl-2-diphospho-5'-guanosine
ADP-L-glycero-β-D-manno-heptose
(L-threonylcarbamoyl)adenylate
aminoacetone
canavaninosuccinate
L-canavanine
L-arginino-succinate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole
(+)-muconolactone
muconolactone
cis,cis-muconate
guanidinoacetate
creatinine
coproporphyrinogen III
hydroxypyruvate
enol-phenylpyruvate
pyruvic oxime
urocanate
3-phosphooxypyruvate
4-phosphooxy-L-threonine
(2S)-2-amino-3-oxo-4-phosphooxybutanoate
3-amino-1-hydroxyacetone 1-phosphate
phosphocholine
N-dimethylethanolamine phosphate
O-phosphoethanolamine
N-methylethanolamine phosphate
butanoyl phosphate
L-cysteinylglycine
D-alanyl-D-alanine
hippurate
4-methylphenol
L-homocysteine
DNA with lesion
cobalt-precorrin-2
cobalt-sirohydrochlorin
adenosylcobinamide-GDP
adenosyl-cobinamide phosphate
adenosylcobinamide
adenosyl-cob(III)yrinate a,c-diamide
adenosylcobyrate
cob(II)yrinate c-monoamide
cobalt-factor III
cobalt-precorrin-3
cobalt-precorrin-7
cobalt-precorrin-8
cobalt-precorrin-6B
cobalt-precorrin-5B
cobalt-precorrin-6A
cobalt-precorrin-4
cobalt-precorrin-5A
cobyrinate
adenosylcobalamin 5'-phosphate
cob(II)yrinate a,c-diamide
cob(I)yrinate a,c-diamide
cob(I)inamide
cob(I)alamin
adenosylcobalamin
protoheme
hydrogen cyanide
protoporphyrin IX
uroporphyrinogen-III
uroporphyrinogen-I
coproporphyrinogen I
protoporphyrinogen IX
oxygen
sn-glycerol 3-phosphate
3-phospho-D-glyceroyl-phosphate
(R)-glycerate
3-phospho-D-glycerate
2-phospho-D-glycerate
5,10-methenyltetrahydrofolate mono-L-glutamate
methionol
3-(methylsulfanyl)propanal
dimethyl sulfide
thiocyanate
glutathione
L-cysteate
3-sulfopyruvate
Fe3+
H+
ammonium
Co2+
Fe2+
Cu2+
trimethyl sulfonium
hydrogencarbonate
thiosulfate
sulfite
selenide
hydrogensulfite
phosphate
diphosphate
triphosphate
2-iminopropanoate
2-aminoprop-2-enoate
agmatine
putrescine
spermidine
choline
2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
sn-glycero-3-phosphocholine
sn-glycero-3-phosphoethanolamine
5'-deoxy-5'-fluoroadenosine
5-fluoro-5-deoxy-D-ribose 1-phosphate
5'-chloro-5'-deoxyadenosine
5-chloro-5-deoxyribose 1-phosphate
1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide
phosphoribulosylformimino-AICAR-phosphate
5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide
acetyl-CoA
formyl-CoA
oxalyl-CoA
succinyl-CoA
(E)-glutaconyl-CoA
3'-dephospho-CoA
benzoyl-CoA
(R)-2-hydroxyglutaryl-CoA
(11Z,14Z,17Z)-3-oxoicosatrienoyl-CoA
(3R,11Z,14Z,17Z)-3-hydroxyicosatrienoyl-CoA
malonyl-CoA
(R)-methylmalonyl-CoA
(S)-methylmalonyl-CoA
crotonyl-CoA
(S)-malyl-CoA
cerotoyl-CoA
2-carboxy-cerotoyl-CoA
propanoyl-CoA
butanoyl-CoA
acetoacetyl-CoA
FMNH2
FMN
FAD
(S)-NADHX
(R)-NADHX
NADH
NADPH
NAD+
NADP+
coenzyme A
(R)-lipoate
oxidized coenzyme F420-0
7,8-dihydrofolate monoglutamate
5,6,7,8-tetrahydrofolate
(6S)-5-formyl-tetrahydrofolate mono-L-glutamate
5,10-methylenetetrahydropteroyl mono-L-glutamate
10-formyl-tetrahydrofolate mono-L-glutamate
5-methyltetrahydropteroyl mono-L-glutamate
riboflavin
nicotinate
pyridoxine 5'-phosphate
pyridoxal 5'-phosphate
precorrin-2
precorrin-1
sirohydrochlorin
6,7-dimethyl-8-(1-D-ribityl)lumazine
7,8-dihydroneopterin 3'-triphosphate
7,8-dihydroneopterin 2',3'-cyclic phosphate
adenine
guanine
2'-deoxyinosine
2'-deoxyguanosine
2'-deoxyadenosine
xanthosine
guanosine
inosine
adenosine
hypoxanthine
dGTP
dATP
dGDP
dADP
GDP
ADP
GMP
XMP
IMP
AMP
GTP
ATP
orotate
dUTP
dCTP
UTP
UDP
CDP
CTP
dTDP
dTTP
dTMP
dCMP
dCDP
uracil
dUMP
UDP-α-D-glucose
UDP-α-D-glucuronate
UDP-N-acetyl-α-D-mannosamine
UDP-N-acetyl-α-D-glucosamine-enolpyruvate
UDP-α-D-galactose
UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate
UDP-N-acetyl-α-D-muramate
UDP-N-acetyl-α-D-muramoyl-L-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
UDP-N-acetyl-α-D-mannosaminuronate
UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate
UDP-N-acetyl-α-D-glucosamine
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
uridine
cytidine
UMP
CMP
preQ1
preQ0
4-tyrosol
urate
3-methoxy-4-hydroxyphenylglycol
phenylacetaldehyde
(4-hydroxyphenyl)acetaldehyde
3,4-dihydroxyphenylglycol
3,4-dihydroxyphenylglycolaldehyde
benzoate
chorismate
L-aspartate
fumarate
succinate
(S)-malate
cis-aconitate
D-threo-isocitrate
(S)-lactate
acetate
pyruvate
formate
butanoate
oleate
3-phenyl-2-oxopropanoate
3-(4-hydroxyphenyl)pyruvate
glyoxylate
2-oxoglutarate
L-serine
creatine
L-alanine
L-leucine
glycine
L-glutamine
L-proline
D-glutamate
L-glutamate
L-arginine
L-lysine
L-histidine
L-tyrosine
L-asparagine
L-threonine
L-phenylalanine
D-alanine
D-proline
D-ornithine
D-aspartate
L-aspartyl-4-phosphate
L-2-amino-3-oxobutanoate
L-threonine 3-O-phosphate
3-phospho-L-serine
sarcosine
formyl-L-isoglutamine
N-formimino-L-glutamate
N-acetyl-L-aspartate
N-acetyl-L-ornithine
N-carbamoyl-L-aspartate
L-citrulline
L-isoleucine
L-valine
S-adenosyl-L-homocysteine
O-phospho-L-homoserine
L-ornithine
L-homoserine
L-aspartate 4-semialdehyde
S-adenosyl-L-methionine
hypoglycin A
meso-diaminopimelate
L-methionine
L,L-diaminopimelate
L-isoglutamine
methylglyoxal
isobutanal
1-propanal
acetaldehyde
butan-1-al
formaldehyde
(S)-lactaldehyde
phytenal
D-glyceraldehyde
α-D-glucopyranose
β-D-glucopyranose
β-D-ribopyranose
β-D-galactopyranose
α-D-galactopyranose
aldehydo-D-ribose
α-D-ribofuranose
β-D-ribofuranose
propan-1-ol
ethanol
butan-1-ol
phytol
glycerol
1-(oleoyl)-sn-glycero-3-phosphoethanolamine
di-trans,octa-cis-undecaprenyl phosphate
di-trans,octa-cis-undecaprenyl diphosphate
heptosyl-Kdo2-lipid A
(heptosyl)2-Kdo2-lipid A
iron(III) dicitrate
ferric-enterobactin complex
1-(β-D ribofuranosyl)nicotinamide
maltotriose
maltotetraose
maltoheptaose
maltohexaose
maltopentaose
sucrose
N-acetyl-α-D-glucosamine 1-phosphate
β-D-fructofuranose
D-xylulose
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
a peptidoglycan dimer (meso-diaminopimelate containing)
a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)
ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine
ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine
undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine
undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine
CMP-3-deoxy-β-D-manno-octulosonate
ADP-α-D-glucose
GDP-α-D-mannose
GDP-4-dehydro-α-D-rhamnose
GDP-β-L-fucose
D-glyceraldehyde 3-phosphate
α-D-glucopyranose 1-phosphate
5-phospho-α-D-ribose 1-diphosphate
D-erythrose 4-phosphate
D-sedoheptulose 7-phosphate
4-phospho-D-erythronate
β-D-fructose 1,6-bisphosphate
β-D-fructofuranose 6-phosphate
D-fructose 6-phosphate
α-D-mannopyranose 6-phosphate
β-D-mannopyranose 6-phosphate
α-D-glucose 6-phosphate
β-D-glucose 6-phosphate
1-deoxy-D-xylulose 5-phosphate
D-xylulose 5-phosphate
D-ribulose 5-phosphate
aldehydo-D-arabinose 5-phosphate
α-D-ribose-1-phosphate
2-deoxy-α-D-ribose 1-phosphate
L-fuculose 1-phosphate
α-D-galactose 1-phosphate
β-D-glucopyranose 1-phosphate
β-D-fructofuranose 1-phosphate
α-D-mannose 1-phosphate
adenylo-succinate
5'-deoxyadenosine
1-(5-phospho-β-D-ribosyl)-ATP
1-(5-phospho-β-D-ribosyl)-AMP
β-nicotinamide D-ribonucleotide
cyclic di-3',5'-guanylate
hypoglycin B
2-iminosuccinate