ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C446

5-hydroxyindole thiazolidine carboxylate

C1010

ammonia

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C11802

4'-phosphopantetheine

C295

(R)-4-phosphopantoate

C1268

(R)-4'-phosphopantothenate

C12848

N5-carboxyaminoimidazole ribonucleotide

C12056

L-arginino-succinate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C12174

4-amino-2-methyl-5-pyrimidinemethanol

C3319

4-methyl-2-oxopentanoate

C15156

dialurate

C1038

α-ribazole

C11711

(R)-1-amino-2-propanol O-2-phosphate

C12315

5,6-dimethylbenzimidazole

C1036

α-ribazole 5'-phosphate

C1633

(R)-1-aminopropan-2-ol

C1455

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

C8399

5-hydroxytryptophol

C8407

5-hydroxyindole acetaldehyde

C423

3-methoxy-4-hydroxyphenylglycolaldehyde

C8344

indole-3-glycol

C8410

indole-3-glycol aldehyde

C12102

isobutanol

C13800

3-methylbutanol

C13801

3-methylbutanal

C13799

2-methylbutanol

C11976

2-methylbutanal

C13798

2-phenylethanol

C7865

urea

C11881

N-methylhydantoin

C1186

5-oxo-L-proline

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C15238

5-deoxy-α-ribose 1-phosphate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C12352

(S)-dihydroorotate

C11832

orotidine 5'-phosphate

C11479

phosphoenolpyruvate

C12078

itaconate

C1438

(2S)-2-isopropylmalate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C14202

hexulose 6-phosphate

C11930

N-acetylglutamyl-phosphate

C11635

L-tartrate

C1325

4-amino-4-deoxychorismate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1184

5-phospho-β-D-ribosylamine

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C13851

hydrogenobyrinate

C13850

hydrogenobyrinate a,c-diamide

C927

carbon monoxide

C9422

nicotinate adenine dinucleotide

C11964

(R)-mevalonate

C13985

(R)-5-phosphomevalonate

C3482

dihydroxyacetone

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C11483

glycolate

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C10349

glycerone phosphate

C2191

carbamoyl phosphate

C6614

O-ureido-L-homoserine

C14074

prenyl diphosphate

C2263

4-prenylphlorisobutyrophenone

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C11606

thiamine phosphate

C11604

thiamine diphosphate

C12164

H2

C8333

(indol-3-yl)pyruvate

C11693

(indol-3 yl)acetyl-CoA

C14921

β-L-arabinose 1-phosphate

C3262

3-methyl-2-oxobutanoate

C1528

2-dehydropantoate

C15215

(L-threonylcarbamoyl)adenylate

C891

citrate

C1321

4-aminobutanoate

C11639

succinate semialdehyde

C6349

3-oxopropanoate

C1196

S-methyl-5'-thioadenosine

C13681

5-carboxymethyl-2-hydroxymuconate

C13854

hydrogen selenide

C1102

O-acetyl-L-serine

C11857

β-nicotinate D-ribonucleotide

C12364

isopentenyl diphosphate

C12274

enol-phenylpyruvate

C1353

3-phosphooxypyruvate

C6444

oxaloacetate

C12016

(lipoyl)adenylate

C873

coproporphyrinogen III

C11543

H2O

C928

CO2

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C9821

cobalt-factor III

C9822

cobalt-precorrin-3

C9845

cobalt-sirohydrochlorin

C9837

cobalt-precorrin-7

C9866

cobalt-precorrin-8

C9842

cobalt-precorrin-6B

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9847

cobalt-precorrin-4

C9871

cobalt-precorrin-5A

C9855

adenosyl-cobinamide phosphate

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C9800

adenosylcobyrate

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9874

cob(I)alamin

C5221

adenosylcobalamin

C9811

cob(II)yrinate c-monoamide

C9828

cob(II)yrinate a,c-diamide

C9861

cobyrinate

C6624

protoheme

C7658

uroporphyrinogen-III

C7666

protoporphyrinogen IX

C7121

oxygen

C7118

hydrogen sulfide

C7126

S0

C8420

sn-glycerol 1-phosphate

C6437

3-phospho-D-glyceroyl-phosphate

C11476

(R)-glycerate

C6427

2,3-diphospho-D-glycerate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C6317

5,10-methenyltetrahydrofolate mono-L-glutamate

C6287

2-octaprenylphenol

C4606

S-(hydroxymethyl)glutathione

C4704

methionol

C4768

3-(methylsulfanyl)propanal

C4678

glutathione

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5744

5-(2-hydroxyethyl)-4-methylthiazole

C12587

L-cysteate

C12637

3-sulfopyruvate

C4580

(R)-S-lactoylglutathione

C4328

ammonium

C4318

K+

C4320

H+

C11006

Co2+

C7036

hydrogencarbonate

C7024

thiosulfate

C7022

selenide

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3580

dehydrospermidine

C3548

putrescine

C3574

spermidine

C2906

2,5-dichloro-p-quinol

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C9096

(indol-3-yl)acetate

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C5314

2-methylacetoacetyl-CoA

C5282

itaconyl-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5035

4-hydroxybenzoyl-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5119

4-cis-undecenoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5113

4-trans-undecenoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5298

acetyl-CoA

C4901

succinyl-CoA

C4937

3'-dephospho-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C1175

butanoyl-CoA

C1177

propanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C14697

decanoyl-CoA

C14662

hexanoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C6200

3-oxohexanoyl-CoA

C6198

3-oxodecanoyl-CoA

C6201

3-oxododecanoyl-CoA

C6197

3-oxooctanoyl-CoA

C6079

3-oxo-myristoyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C10049

FMNH2

C10052

FMN

C5392

(S)-NADHX

C5394

(R)-NADHX

C14497

NADPH

C14500

NADH

C4018

NADP+

C4020

NAD+

C10614

coenzyme A

C10611

(R)-lipoate

C7129

5,6,7,8-tetrahydrofolate

C6250

5,10-methylenetetrahydropteroyl mono-L-glutamate

C414

10-formyl-tetrahydrofolate mono-L-glutamate

C8565

5-methyltetrahydropteroyl mono-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C10988

riboflavin

C10982

nicotinate

C2305

precorrin-1

C2311

precorrin-2

C1705

sirohydrochlorin

C15044

reduced riboflavin

C12730

7,8-dihydroneopterin 3'-triphosphate

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C9454

adenine

C7813

2'-deoxyadenosine

C7848

2'-deoxyguanosine

C15088

adenosine

C7743

dAMP

C7840

dGMP

C7749

dITP

C7783

dATP

C7751

dGTP

C7747

dIDP

C7823

dADP

C7807

dGDP

C7817

IDP

C7795

GDP

C7757

ADP

C7811

XMP

C7827

GMP

C7741

IMP

C7809

AMP

C7759

ITP

C7745

GTP

C7844

ATP

C11481

orotate

C8764

dTTP

C8755

dCMP

C8770

dUMP

C8733

dCDP

C8752

dUDP

C8772

dCTP

C8724

dUTP

C8739

uracil

C8744

dTMP

C8720

dTDP

C8761

CTP

C8732

CDP

C8760

UTP

C8714

UDP

C7780

UDP-α-D-glucose

C8666

UDP-α-D-galactose

C7790

UDP-N-acetyl-α-D-mannosamine

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C8613

UDP-β-L-arabinopyranose

C2702

cytidine

C2706

uridine

C2519

thymidine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C10601

thymine

C2245

CMP

C2241

UMP

C13366

(indole-3-yl)acetonitrile

C7139

4-tyrosol

C8490

3-methoxy-4-hydroxyphenylglycol

C3641

(4-hydroxyphenyl)acetaldehyde

C3647

phenylacetaldehyde

C2763

3,4-dihydroxyphenylglycol

C2758

3,4-dihydroxyphenylglycolaldehyde

C8974

4-aminobenzoate

C8950

chorismate

C6442

succinate

C6443

fumarate

C5596

L-aspartate

C2802

(S)-malate

C8534

cis-aconitate

C3288

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

C8531

D-threo-isocitrate

C6185

(R)-lactate

C3420

propanoate

C11517

acetate

C3308

pyruvate

C3421

formate

C11482

(R)-pantoate

C3345

3-phenyl-2-oxopropanoate

C3351

glyoxylate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C5579

L-serine

C11444

N-carbamoylsarcosine

C11441

β-alanine

C12067

glycine

C5609

L-glutamine

C5588

L-leucine

C5597

L-alanine

C5607

L-glutamate

C5642

L-arginine

C5584

L-lysine

C5612

L-cysteine

C5573

L-tyrosine

C5577

L-threonine

C5643

L-asparagine

C2469

L-phenylalanine

C14973

N-acetyl-L-glutamate

C13322

N-carbamoyl-L-aspartate

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C12303

L-citrulline

C12245

L-homoserine

C12261

hypoglycin A

C12239

L-aspartate 4-semialdehyde

C12231

L-ornithine

C12237

L-canaline

C2426

S-sulfo-L-cysteine

C12247

L-homocysteine

C12229

O-phospho-L-homoserine

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C5585

meso-diaminopimelate

C5592

L-selenocysteine

C5583

L-methionine

C5595

L-cystathionine

C5702

a coenzyme-A group

C3485

butan-1-al

C3523

1-propanal

C3494

isobutanal

C3483

formaldehyde

C3500

acetaldehyde

C14804

phytenal

C7087

α-D-glucopyranose

C3449

butan-1-ol

C3450

ethanol

C3447

propan-1-ol

C14807

phytol

C3731

glycerol

C6261

(3R)-linalool

C6262

(3S)-linalool

C10527

myo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C10448

saturated CDP-archaeol

C10453

unsaturated CDP-archaeol

C6266

2,3-bis-O-phytanyl-sn-glycerol 1-phosphate

C6269

2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate

C8321

geranyl diphosphate

C9077

(2E,6E)-farnesyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C5378

geranylgeranyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C2258

phlorisovalerophenone

C2269

deoxyhumulone

C2261

4-prenylphlorisovalerophenone

C2266

deoxycohumulone

C10693

sucrose

C2012

keto-D-fructose

C8835

β-D-fructofuranose

C3126

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C9882

ADP ribose 1'',2''-cyclic phosphate

C9888

ADP ribose 1''-phosphate

C9884

ADP-D-ribose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10340

D-erythrose 4-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C6717

α-D-mannopyranose 6-phosphate

C2123

β-D-glucose 6-phosphate

C2125

α-D-glucose 6-phosphate

C8701

L-xylulose 5-phosphate

C10607

L-ribulose 5-phosphate

C10604

D-ribulose 5-phosphate

C2057

α-D-ribose-1-phosphate

C2056

2-deoxy-α-D-ribose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C10288

adenylo-succinate

C7652

cyclic-AMP

C5552

5'-deoxyadenosine

C4243

β-nicotinamide D-ribonucleotide

C11520

hypoglycin B

C1328

L-cysteinylglycine

C8496

N-acetyl-L-glutaminyl-L-glutamine

C8498

N-acetyl-L-glutaminyl-L-glutamine amide

C6599

2-iminobutanoate