an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(3E)-2-oxopent-3-enoate

(2E)-2-hydroxypenta-2,4-dienoate

ammonia

1,2-dihydro-β-NADP

picolinate

1-piperideine 6-carboxylate

4-oxoglutaramate

4-aminobutanoate

6-oxohexanoate

adipate

6-aminohexanoate cyclic dimer

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-carboxymethylmuconate semialdehyde

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

(R)-1-amino-2-propanol O-2-phosphate

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

acrylate

selenodiglutathione

glutathioselenol

hydrogen selenide

γ-butyrobetaine

dialurate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

1,4-dihydroxy-2-naphthoyl-CoA

1,4-dihydroxy-2-naphthoate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

(2Z)-2-(acetamidomethylene)succinate

3-hydroxy-2-methylpyridine-5-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

autoinducer 2

hypotaurine

3-ureidopropanoate

pregn-5-ene-3,20-dione-17-ol

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

pregn-5-ene-3,20-dione

5-androstene-3,17-dione

S-ribosyl-L-homocysteine

3-deoxy-α-D-manno-2-octulosonate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(R)-4-phosphopantoate

N-succinyl-L,L-2,6-diaminopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

4-pyridoxolactone

6-chlorohydroxyquinol

2-methyl-4-chlorophenol

4-maleyl-acetoacetate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

6-phospho D-glucono-1,5-lactone

N,N-Dimethylformamide

phosphocholine

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

D-erythro-imidazole-glycerol-phosphate

orotidine 5'-phosphate

lipid IV_A

hydroxypyruvate

2-dehydro-3-deoxy-D-galactonate

4-imidazolone-5-propanoate

urocanate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-enolpyruvoyl-shikimate 3-phosphate

phosphonoacetate

tetrahydrogeranylgeranyl diphosphate

dihydrogeranylgeranyl diphosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

prenyl diphosphate

(indol-3-yl)acetamide

butyramide

propionamide

acrylamide

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

4-amino-4-deoxychorismate

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

propanoyl phosphate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

(S)-dihydroorotate

S-formylglutathione

lipid X

lipid A disaccharide (E. coli)

L-gulono-1,4-lactone

N-(5-phosphoribosyl)-anthranilate

3-deoxy-D-manno-octulosonate 8-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

5-aminolevulinate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

3-oxopropanoate

4'-phosphopantetheine

O-acetyl-L-serine

5-methylsalicylate

4-methylsalicylate

L-selenocystathionine

3-mercaptopyruvate

xanthine

ethanolamine

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

(4-hydroxyphenyl)acetate

(4S)-4-hydroxy-2-oxoheptanedioate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

oxalosuccinate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

glutathione disulfide

hydrogen peroxide

5,6-dimethylbenzimidazole

α-ribazole

α-ribazole 5'-phosphate

2,5-dioxopentanoate

N-Formyl-L-kynurenine

3-hydroxyanthranilate

5-(methylsulfanyl)-ribulose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

S-methyl-5-thio-α-D-ribose 1-phosphate

2-phosphoglycolate

α-D-ribose-1-methylphosphonate 5-phosphate

5-phospho-α-D-ribose 1,2-cyclic phosphate

carboxynorspermidine

norspermidine

(S)-2-amino-6-oxohexanoate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

quinolinate

tartronate semialdehyde

4-fumaryl-acetoacetate

acetoacetate

5-dehydro-D-gluconate

(R)-2,3-dihydroxy-3-methylpentanoate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

hydrogenobyrinate

dimethylamine

glycolate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

2-maleylacetate

isoquinoline

isoquinolin-2(1H)-one

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

carbamoyl phosphate

carboxyphosphate

homogentisate

(2-hydroxyphenyl)acetate

(S)-3-methyl-2-oxopentanoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

2-O-(α-D-glucopyranosyl)-sn-glycerol 3-phosphate

3-methyl-2-oxobutanoate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

6-aminohexanoate linear dimer

6-aminohexanoate

(S)-mandelate

(R)-mandelate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

3-deoxy-D-glycero-2,5-hexodiulosonate

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

α-D-glucosamine 1-phosphate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

β-D-ribosylnicotinate

creatinine

5-guanidino-2-oxopentanoate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

5-methylcytosine

histidinal

histidinol

2-amino-3-carboxymuconate-6-semialdehyde

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

3-dehydroshikimate

5-phospho-β-D-ribosylamine

L-canavanine

5-oxo-L-proline

imidazole acetol-phosphate

L-histidinol phosphate

hydrogenobyrinate a,c-diamide

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

2-C-methyl-D-erythritol 4-phosphate

3-phosphooxypyruvate

5-dehydro-4-deoxy-D-glucarate

glycerone phosphate

thiamine diphosphate

oxaloacetate

isopentenyl diphosphate

4-hydroxy-2-nonenal

γ-L-glutamyl 5-phosphate

β-nicotinate D-ribonucleotide

DNA without lesion

prephenate

citrate

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

chloramphenicol

porphobilinogen

preuroporphyrinogen

(2S)-2-isopropylmalate

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

4-methyl-2-oxopentanoate

3-ethylmalate

2-oxovalerate

carbonic acid

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

coproporphyrinogen III

(R)-pantothenate

(R)-4'-phosphopantothenate

(S)-ureidoglycolate

urea

2-dehydro-3-deoxy-D-galactonate 6-phosphate

succinate semialdehyde

phosphoenolpyruvate

nicotinate adenine dinucleotide

cyanate

acetyl phosphate

D-gluconate 6-phosphate

anthranilate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

CO₂

shikimate

shikimate 3-phosphate

H₂O

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

prostaglandin F_2α

phenylacetate

ethylphosphate

carboxyphosphinopyruvate

3-(hydroxyphosphinoyl)pyruvate

1-carboxyvinyl carboxyphosphonate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

hemin

adenosylcobyrate

3-deacetyl-3-(1-hydroxyethyl)bacteriochlorophyllide a

bacteriochlorophyllide a

3,8-divinyl chlorophyllide a

3,8-divinyl protochlorophyllide a

Mg-protoporphyrin

chlorophyllide a

protochlorophyllide a

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(II)yrinate c-monoamide

cobyrinate

cobalt-precorrin-5B

cobalt-precorrin-6B

cobalt-precorrin-6A

adenosyl-cobinamide phosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cob(II)yrinate a,c-diamide

protoheme

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

siroheme

hydrogen sulfide

S⁰

oxygen

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

2-O-(α-D-mannosyl)-3-phospho-D-glycerate

2-O-(α-D-mannosyl)-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

CMP-N-acetyl-β-neuraminate

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

preQ₀

3-cyanopyridine

(indole-3-yl)acetonitrile

propionitrile

acrylonitrile

n-butyronitrile

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

chloramphenicol 3-acetate

N-acetyl-β-neuraminate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

3-chloro-cis,cis-muconate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

2-chloromaleylacetate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

2,4,6-trichlorophenol

2,4-dichlorophenol

3,5-dichlorocatechol

5-chloro-3-methylcatechol

4-chlorosalicylate

5-chlorosalicylate

4-chlorocatechol

Fe³⁺

ammonium

H⁺

Zn²⁺

Mn²⁺

Mo²⁺

Mg²⁺

Co²⁺

Fe²⁺

nitrate

sulfate

hydrogensulfite

molybdate

selenite

OH^-

selenate

superoxide

thiosulfate

sulfite

hydrogencarbonate

phosphonate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

ferrichrome

glycine betaine

choline

choline sulfate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

cadaverine

spermidine

putrescine

S-(hydroxymethyl)glutathione

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

S-methyl-L-methionine

methanethiol

thiocyanate

glutathione

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

taurine

sulfoacetaldehyde

2-sulfinoacetaldehyde

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

methylacrylyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

γ-butyrobetainyl-CoA

trans-feruloyl-CoA

L-carnitinyl-CoA

crotonobetainyl-CoA

isobutanoyl-CoA

3'-dephospho-CoA

(2S)-ethylmalonyl-CoA

(2R)-ethylmalonyl-CoA

(+)-7-epi-jasmonoyl-CoA

anthraniloyl-CoA

salicyl-CoA

gentisyl-CoA

phenylacetyl-CoA

3-methylglutaconyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

4-hydroxybenzoyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

acetyl-CoA

malonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

phytenoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

18-hydroxylinoleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

cis-vaccenoyl-CoA

palmitoleoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

methane

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

pregnenolone

3-β-hydroxyandrost-5-en-17-one

cholesterol

cholest-5-en-3-one

17-α-hydroxypregnenolone

androst-4-ene-3,17-dione

(+)-7-epi-jasmonate

(indol-3-yl)acetate

nicotinamide

nicotinate

riboflavin

thiamine

L-carnitine

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

4-pyridoxate

pyridoxine

pyridoxal

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxamine

pyridoxamine 5'-phosphate

FAD

FADH₂

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinone

caldariellaquinol

ubiquinol-8

3-demethylubiquinol-8

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

isoguanine

8-oxo-dGTP

8-oxo-GTP

2'-deoxyadenosine

2'-deoxyinosine

1-(5-phospho-β-D-ribosyl)-ATP

dIDP

dITP

IDP

ITP

1-(5-phospho-β-D-ribosyl)-AMP

2'-deoxyguanosine

pppGpp

ppGpp

cyclic-AMP

adenylo-succinate

dGTP

dGDP

dATP

dADP

XMP

IMP

hypoxanthine

GMP

GDP

cyclic-GMP

GTP

5'-deoxyadenosine

guanosine 3'-monophosphate

adenosine 3'-monophosphate

AMP

ATP

ADP

5-fluorocytosine

5-fluorouracil

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

inosine

adenosine

guanosine

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dUTP

dCTP

CTP

UTP

dCMP

dTMP

dUMP

UMP

CMP

dTDP

dCDP

dUDP

CDP

UDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

cytidine-3'-monophosphate

uridine 3'-monophosphate

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-glucose

GDP-β-L-fucose

ADP-α-D-glucose

preQ₁

cytosine

uracil

thymine

adenine

guanine

5,6-dihydrouracil

5,6-dihydrothymine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

CDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-β-L-iduronate

UDP-α-D-glucuronate

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

CDP-4-dehydro-6-deoxy-α-D-glucose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

molybdopterin

coenzyme A

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

(S)-1-pyrroline-5-carboxylate

precorrin-6A

precorrin-3B

precorrin-1

precorrin-4

precorrin-5

precorrin-2

precorrin-3A

precorrin-6B

precorrin-7

precorrin-8x

sirohydrochlorin

hydantoin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

molybdopterin adenine dinucleotide

7,8-dihydropterin

cyclic pyranopterin phosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropteroate

orotate

toluene

urate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,3-dihydroxybenzoate

catechol

4-methylcatechol

3,4-dihydroxyphenylacetate

protocatechuate

2,6-dichlorohydroquinone

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

ferulate

salicylate

4-aminobenzoate

diacetyl

methylglyoxal

1-octanal

butan-1-al

1-propanal

formaldehyde

acetaldehyde

phytenal

L-glyceraldehyde

D-glyceraldehyde

α-D-ribofuranose

α-D-xylopyranose

β-D-galactopyranose

α-D-galactopyranose

butan-1-ol

propan-1-ol

methanol

ethanol

phytol

1-octanol

glycerol

D-ribitol

D-mannitol

D-sorbitol

L-iditol

1D-chiro-inositol

scyllo-inositol

myo-inositol

1-keto-D-chiro-inositol

scyllo-inosose

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

aldehydo-D-galacturonate

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

4-deoxy-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

4-deoxy-2-O-sulfo-β-L-erythro-hex-4-enopyranuronosyl-(1,4)-D-N-sulfoglucosamine 6-O-sulfate

α,α-trehalose

keto-L-sorbose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

D-xylulose

D-ribulose

L-ribulose

β-D-fructofuranose

4-deoxy-L-threo-hex-4-enopyranuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

L-ribulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

L-idonate

D-galactonate

D-mannonate

L-gulonate

D-gluconate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

dioleoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

trans,octacis-decaprenyl phosphate

sitosterol

3-oxo-24-ethyl-cholest-5-ene

phytyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

allantoate

6-caprolactam

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

chorismate

fumarate

L-aspartate

succinate

(S)-malate

D-galactarate

α,ω-9Z-octadecenedioate

3-(carbamoylamino)-2-methylpropanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

2-oxobutanoate

2-oxoglutarate

acetate

formate

propanoate

(S)-lactate

(R)-lactate

octanoate

7-hydroxylaurate

laurate

decanoate

gentisate

(15Z)-tetracosenoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

oleate

α-linolenate

linoleate

stearate

palmitate

phytenate

5-deoxy-D-glucuronate

D-tagaturonate

L-α-amino-ε-keto-pimelate

L-kynurenine

carbamate

L-serine

L-cysteine

L-asparagine

glycine

L-tyrosine

L-threonine

L-glutamine

L-histidine

L-arginine

L-lysine

L-glutamate

L-methionine

L-tryptophan

L-isoleucine

L-valine

L-proline

L-phenylalanine

L-alanine

L-leucine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

D-glutamate

D-proline

D-aspartate

D-arginine

cis-4-hydroxy-D-proline

D-alanine

L-isoglutamine

L-cystathionine

L-ornithine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-2,4-diaminobutanoate

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

seleno-L-homocysteine

L-saccharopine

iminoarginine

3-phospho-L-serine

S-methyl-L-cysteine

sarcosine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

L-proline betaine

D-proline betaine

N-methyl-L-proline

O-acetyl-L-homoserine

L-citrulline

O-phospho-L-homoserine

1-aminocyclopropane-1-carboxylate

L-canaline

hypoglycin A

L-homoserine

O-succinyl-L-homoserine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-aspartate 4-semialdehyde

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine