an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

CO₂

coproporphyrinogen III

preuroporphyrinogen

porphobilinogen

5-carboxymethyl-2-hydroxymuconate

canavaninosuccinate

O-ureido-L-homoserine

L-arginino-succinate

isopentenyl diphosphate

formate

S-formylglutathione

glycerone phosphate

prenyl diphosphate

5-aminolevulinate

6-deoxyerythronolide B

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

dethiobiotin

7,8-diaminopelargonate

γ-L-glutamyl 5-phosphate

5-amino-6-(D-ribitylamino)uracil

(R)-pantothenate

hydrogen peroxide

phosphoenolpyruvate

H₂

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

lipid A disaccharide (E. coli)

lipid X

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

anthranilate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

carbon monoxide

N-(5-phosphoribosyl)-anthranilate

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

β-D-ribosylnicotinate

β-nicotinate D-ribonucleotide

nicotinate adenine dinucleotide

N-acetyl-L-glutamate 5-semialdehyde

prephytoene diphosphate

α-D-glucosamine 1-phosphate

(2S)-2-isopropylmalate

3-methyl-2-oxobutanoate

(S)-4-amino-5-oxopentanoate

α-D-galactosyl-diphosphoundecaprenol

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

8-amino-7-oxononanoate

pimeloyl-CoA

(S)-dihydroorotate

3-dehydroshikimate

3-phosphooxypyruvate

2-dehydropantoate

quinolinate

arsenite

dihydroxyacetone

orotidine 5'-phosphate

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

(S)-2,3,4,5-tetrahydrodipicolinate

carbonic acid

shikimate 3-phosphate

shikimate

N-acetylglutamyl-phosphate

acetyl phosphate

oxaloacetate

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

dihydromethanophenazine

CoB-CoM heterodisulfide

methanophenazine

coenzyme B

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

S-methyl-5'-thioadenosine

5-deoxy-α-ribose 1-phosphate

homogentisate

(2-hydroxyphenyl)acetate

D-gluconate 6-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-oxoglutaramate

ManNAc-GlcNAc-PP-undecaprenol

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

6-phospho D-glucono-1,5-lactone

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

histidinol

histidinal

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

(2R,3S)-3-isopropylmalate

4'-phosphopantetheine

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribitylamino)uracil

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

5-enolpyruvoyl-shikimate 3-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

prephenate

2-C-methyl-D-erythritol 4-phosphate

hydrogenobyrinate a,c-diamide

carbamoyl phosphate

citrate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(R)-1-amino-2-propanol O-2-phosphate

hydrogenobyrinate

(S)-2-amino-6-oxohexanoate

3-hydroxypropanoate

(2R,3S)-3-methylmalate

citraconate

2-isopropylmaleate

DNA without lesion

2-iminoacetate

7-carboxy-7-deazaguanine

N-acetyl-D-muramate 6-phosphate

ethyl acetate

1-deoxy-L-glycero-tetrulose 4-phosphate

glycolate

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

dihydrogeranylgeranyl diphosphate

tetrahydrogeranylgeranyl diphosphate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

1,6-anhydro-N-acetyl-β-muramate

4-hydroxy-2-nonenal

succinate semialdehyde

aminoacetone

2-aminomalonate semialdehyde

2-aminoacetaldehyde

2-oxopent-4-enoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

N⁵-carboxyaminoimidazole ribonucleotide

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

4-prenylphlorisobutyrophenone

octadecanal

glutathione disulfide

3-methyl-2-butenal

methylsalicylate

salicyl alcohol

(R)-4-phosphopantoate

3-mercaptopyruvate

L-histidinol phosphate

carboxyphosphate

formamide

urea

L-canavanine

2-phosphoglycolate

propanoyl phosphate

5-methylcytosine

(R)-mandelate

(S)-mandelate

isochorismate

1,4-dihydroxy-2-naphthoate

2-succinylbenzoate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

1,4-dihydroxy-2-naphthoyl-CoA

oxalosuccinate

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

O-acetyl-L-serine

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

α-ribazole 5'-phosphate

α-ribazole

2-maleylacetate

4-amino-4-deoxychorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

oxalate

7,8-didemethyl-8-hydroxy-5-deazariboflavin

dialurate

5,6-dimethylbenzimidazole

(2S)-lactyl-2-diphospho-5'-guanosine

acetoacetate

xanthine

2-amino-3-carboxymuconate-6-semialdehyde

hydrogen selenide

mercuriphenyl acetate

urocanate

4-imidazolone-5-propanoate

autoinducer 2

S-ribosyl-L-homocysteine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

glutathioselenol

selenodiglutathione

lipid IV_A

1-piperideine 6-carboxylate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2E)-2-hydroxypenta-2,4-dienoate

(3E)-2-oxopent-3-enoate

4-oxoglutaramate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

carbamate

L-citrulline

L-cysteine

L-methionine

L-tryptophan

L-serine

glycine

L-aspartate

L-proline

L-glutamate

L-lysine

L-glutamine

L-alanine

L-phenylalanine

L-histidine

L-arginine

L-asparagine

L-isoleucine

L-leucine

L-valine

L-threonine

L-tyrosine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

L-homoserine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-homocysteine

L-ornithine

L-canaline

1-aminocyclopropane-1-carboxylate

L-allo-threonine

meso-diaminopimelate

L-aspartyl-4-phosphate

L-saccharopine

L-2-amino-3-oxobutanoate

2-hydroxy-5-oxoproline

trans-4-hydroxy-L-proline

formyl-L-isoglutamine

N-acetyl-L-aspartate

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

S-methyl-L-cysteine

L-threonine 3-O-phosphate

3-phospho-L-serine

L,L-diaminopimelate

S-trans-1-propenyl-L-cysteine

S-allyl-L-cysteine

L-isoglutamine

D-glutamate

D-alanine

β-alanine

salicylate

2,3-dihydroxybenzoate

4-aminobenzoate

acetate

(R)-pantoate

orotate

5-chloro-5-deoxy-D-ribonate

(S)-1-pyrroline-5-carboxylate

pristanate

palmitate

stearate

octanoate

laurate

7-hydroxylaurate

decanoate

butanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

13(S)-HPOTE

(15Z)-tetracosenoate

oleate

phytenate

linoleate

α-linolenate

(2R,3S)-2-methylisocitrate

(R)-lactate

(S)-lactate

(S)-2-hydroxyglutarate

(R)-glycerate

propanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

pyruvate

2-oxoglutarate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

glyoxylate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

cis-2-methylaconitate

cis-aconitate

D-threo-isocitrate

chorismate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

acetamide

phlorisovalerophenone

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

erythromycin D

3-α-mycarosylerythronolide B

phytyl diphosphate

all-trans-retinyl palmitate

all-trans-retinol

torulene

apo-4'-lycopenal

echinenone

15-cis-phytoene

β-carotene

all-trans-3,4-didehydrolycopene

4'-apo-β-carotenal

(2E,6E)-farnesyl diphosphate

trans,octacis-decaprenyl phosphate

geraniol

geranyl diphosphate

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

erythronolide B

betanidin quinone

betanidin

4-prenylphlorisovalerophenone

deoxycohumulone

deoxyhumulone

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

2-cis,6-trans,10-trans-geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

geranylgeranyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

dioleoyl phosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-(β-D ribofuranosyl)nicotinamide

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

CDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-mycarose

dTDP-D-desosamine

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-mannosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-galactose

UDP-α-D-glucuronate

UDP-α-D-glucose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-sedoheptulose 7-phosphate

D-sedoheptulose 1,7-bisphosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-ribose-1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

sucrose 6^F-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

D-ribulose-1,5-bisphosphate

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

β-D-fructofuranose

β-D-galactopyranose

α-D-galactopyranose

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

glycolaldehyde

keto-D-fructose

keto-L-sorbose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

glycerol

L-iditol

D-sorbitol

sucrose

maltotetraose

maltopentaose

maltohexaose

maltoheptaose

maltotriose

(E)-2-hexenol

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

myo-inositol

1-amino-1-deoxy-scyllo-inositol

scyllo-inosose

1D-myo-inositol 3-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 4-monophosphate

ethanol

butan-1-ol

propan-1-ol

phytol

methanol

methylglyoxal

(E)-2-hexenal

phytenal

formaldehyde

acetaldehyde

butan-1-al

1-propanal

menadione

caldariellaquinone

diacetyl

4-hydroxybenzoate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

urate

benzene

6,7-dehydrobaicalein

baicalein

menadiol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

3-demethylubiquinol-10

3-demethylubiquinol-9

3-demethylubiquinol-7

demethylmenaquinol-8

demethylmenaquinol-7

menaquinol-8

menaquinol-7

ubiquinol-8

ubiquinol-10

ubiquinol-9

ubiquinol-7

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

adenine

AMP

GMP

IMP

XMP

ATP

GTP

ITP

ADP

GDP

IDP

dGDP

dIDP

dADP

dGTP

dITP

dATP

dAMP

dGMP

hypoxanthine

xanthosine

guanosine

inosine

adenosine

2'-deoxyinosine

2'-deoxyadenosine

tetrahydromethanopterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

molybdopterin adenine dinucleotide

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

6-(hydroxymethyl)-7,8-dihydropterin

molybdopterin

cyclic pyranopterin phosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydroneopterin 3'-phosphate

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

MoO₂-molybdopterin cofactor

reduced riboflavin

FMNH₂

FAD

riboflavin

FMN

6,7-dimethyl-8-(1-D-ribityl)lumazine

uracil

thymine

cytosine

preQ₁

isoguanine

dCDP

dCMP

UDP

CDP

CTP

UTP

dTDP

dTMP

dUTP

dUDP

dCTP

dTTP

dUMP

UMP

CMP

uridine

cytidine

2'-deoxyuridine

2'-deoxycytidine

5-fluorouracil

adenosylcobalamin

cobyrinate

precorrin-6B

precorrin-8x

precorrin-7

precorrin-4

precorrin-3B

precorrin-2

precorrin-1

cobalt-precorrin-6A

cobalt-precorrin-5B

cobalt-precorrin-6B

precorrin-3A

precorrin-5

precorrin-6A

coenzyme A

coenzyme M

oxidized coenzyme F₄₂₀-0

5'-deoxyadenosine

ppGpp

pppGpp

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-AMP

cyclic-GMP

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

5-fluorocytosine

(S)-NADHX

(R)-NADHX

nicotinate

pyridoxal 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

cob(I)alamin

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

heptadecane

butyl acetate

geranyl acetate

acetyl-CoA

3'-dephospho-CoA

malonyl-CoA

trans-feruloyl-CoA

trans-caffeoyl-CoA

3-hydroxypropanoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

succinyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

acetoacetyl-CoA

16-hydroxypalmitoyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

cis-vaccenoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(Z)-15-tetracosenoyl-CoA

18-hydroxylinoleoyl-CoA

phytenoyl-CoA

(S)-methylmalonyl-CoA

trans-dienelactone

cis-dienelactone

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

(2R)-3-sulfolactate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

thiocyanate

agmatine

cadaverine

putrescine

spermidine

dehydrospermidine

(2Z)-2-aminobut-2-enoate

sn-glycero-3-phosphoethanolamine

superoxide

hydroxyl radical

sulfate

hydrogencarbonate

selenate

molybdate

nitrite

sulfite

thiosulfate

nitrate

selenite

OH^-

hydrogensulfite

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Mn²⁺

Mg²⁺

Fe²⁺

Co²⁺

Hg²⁺

ammonium

H⁺

K⁺

2-chloroacetate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

preQ₀

hydrogen cyanide

2-methoxy-6-(all-trans-octaprenyl)phenol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(R)-citramalate

N-acetyl-D-mannosamine 6-phosphate

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

(2S)-2-phospholactate

ω-saturated C55 dolichol phosphate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)

2-iminosuccinate

2-iminobutanoate

oxygen

Hg⁰

hydrogen sulfide

pheophorbide a

3,8-divinyl protochlorophyllide a

3,8-divinyl chlorophyllide a

protochlorophyllide a

chlorophyllide a

uroporphyrinogen-III

coproporphyrinogen I

uroporphyrinogen-I

Mg-protoporphyrin

protoporphyrin IX

protoporphyrinogen IX

magnesium-protoporphyrin IX 13-monomethyl ester

red chlorophyll catabolite

protoheme

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate a,c-diamide

adenosyl-cobinamide phosphate

adenosylcobyrate

cob(II)yrinate c-monoamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

N₂

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal