an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

1-piperideine-2-carboxylate

ammonia

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

5-aminopentanoate

4-oxoglutaramate

6-aminohexanoate cyclic dimer

6-oxohexanoate

adipate

4-maleyl-acetoacetate

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

autoinducer 2

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

protoanemonin

selenodiglutathione

glutathioselenol

hydrogen selenide

3-hydroxy-4-methylbenzaldehyde

5-(hydroxymethyl)-2-methylphenol

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

trans-O-hydroxybenzylidenepyruvate

naphthalene-1,2-diol

dialurate

(R)-1-amino-2-propanol O-2-phosphate

glutathione disulfide

5'-phosphoguanylyl(3'→5')guanosine

3-hydroxypropanoate

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

6-amino-2-oxohexanoate

4-aminobutanoate

5-methylcytosine

lipid A disaccharide (E. coli)

lipid IV_A

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

3-hydroxyanthranilate

N-Formyl-L-kynurenine

4-methyl-3-oxoadipate

5-dehydro-D-gluconate

3-mercaptopyruvate

preuroporphyrinogen

2-(4-hydroxyphenyl)-2-oxoacetate

4-hydroxybenzaldehyde

phenylglyoxylate

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

S-formylglutathione

1-deoxy-L-glycero-tetrulose 4-phosphate

lipid X

3-oxocholoyl-CoA

allopregnanolone

deoxycholoyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

5,6-dimethylbenzimidazole

isoquinoline

isoquinolin-2(1H)-one

2,5-dioxopentanoate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

3-maleylpyruvate

4-methylgentisate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

3-methylgentisate

(2E)-2-methyl-4,6-dioxohept-2-enedioate

(1R,2S)-1,2-dihydronaphthalene-1,2-diol

methylamine

N-ethylglycine

ethylamine

2-iminoacetate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

adenosine 5'-phosphoselenate

(R)-mevalonate

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

5-methylsalicylate

4-methylsalicylate

N,N-dimethyl-1,4-phenylenediamine

citrate

xanthine

(S)-5-hydroxyisourate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(4Z)-2-oxohept-4-enedioate

(4S)-4-hydroxy-2-oxoheptanedioate

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

D-erythro-imidazole-glycerol-phosphate

nicotinate adenine dinucleotide

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

D-gluconate 6-phosphate

6-phospho D-glucono-1,5-lactone

α-ribazole

α-ribazole 5'-phosphate

(S)-dihydroorotate

2-aminoacetaldehyde

(S)-mandelate

(R)-mandelate

digallate

gallate

2-protocatechuoylphloroglucinolcarboxylate

carbon monoxide

carbamoyl phosphate

carboxyphosphate

4'-phosphopantetheine

(R)-pantothenate

5-carboxymethyl-2-hydroxymuconate

pimeloyl-CoA

8-amino-7-oxononanoate

secologanin

tryptamine

3-α(S)-strictosidine

isopentenyl diphosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

propanoyl phosphate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

coniferaldehyde

histidinal

histidinol

(S)-ureidoglycolate

prenyl diphosphate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(R)-4-phosphopantoate

(R)-4'-phosphopantothenate

oxaloacetate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

γ-L-glutamyl 5-phosphate

urea

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

S-ribosyl-L-homocysteine

glycerone phosphate

4-carboxy-2-hydroxymuconate-6-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

homogentisate

(2-hydroxyphenyl)acetate

N²-succinylglutamate

adenosine 5'-phosphosulfate

3'-phosphoadenylyl-sulfate

5-amino-6-(D-ribitylamino)uracil

O-acetyl-L-serine

hydroxypyruvate

ethanolamine

3-deoxy-D-manno-octulosonate 8-phosphate

3-deoxy-α-D-manno-2-octulosonate

6-aminohexanoate linear dimer

6-aminohexanoate

(2S)-2-isopropylmalate

7-carboxy-7-deazaguanine

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

hydrogen peroxide

L-gulono-1,4-lactone

2-pyrone-4,6-dicarboxylate

3-phosphooxypyruvate

4-amino-4-deoxychorismate

4-fumaryl-acetoacetate

succinate semialdehyde

3-dehydroquinate

salicyl alcohol

methylsalicylate

5-enolpyruvoyl-shikimate 3-phosphate

5-oxo-L-proline

5-phospho-β-D-ribosylamine

O-ureido-L-homoserine

2-oxoadipate

creatinine

coproporphyrinogen III

(S)-2-amino-6-oxohexanoate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

5-guanidino-2-oxopentanoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

N-(5-phosphoribosyl)-anthranilate

anthranilate

prephenate

2-phosphoglycolate

thiamine phosphate

thiamine diphosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroshikimate

β-D-ribosylnicotinate

(S)-5-amino-3-oxohexanoate

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

L-arginino-succinate

canavaninosuccinate

L-canavanine

α-D-glucosamine 1-phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

DNA without lesion

glycolate

(S)-4-amino-5-oxopentanoate

oxalosuccinate

carbonic acid

shikimate

shikimate 3-phosphate

6-oxo-1,4,5,6-tetrahydronicotinate

6-hydroxynicotinate

2-dehydropantoate

tartronate semialdehyde

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

3-oxopropanoate

4-hydroxy-2-nonenal

orotidine 5'-phosphate

2-maleylacetate

5-aminolevulinate

porphobilinogen

phosphoenolpyruvate

2-C-methyl-D-erythritol 4-phosphate

L-selenocystathionine

5-dehydro-4-deoxy-D-glucarate

imidazole acetol-phosphate

L-histidinol phosphate

CO₂

β-nicotinate D-ribonucleotide

quinolinate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

acetoacetate

H₂O

4-imidazolone-5-propanoate

urocanate

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

carboxyphosphinopyruvate

3-(hydroxyphosphinoyl)pyruvate

1-carboxyvinyl carboxyphosphonate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

cob(II)yrinate c-monoamide

cobyrinate

adenosyl-cobinamide phosphate

cob(II)yrinate a,c-diamide

adenosylcobyrate

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

protoheme

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

hydrogen sulfide

oxygen

2-iminosuccinate

2-iminobutanoate

2-iminopropanoate

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

4-dimethylaminophenylazobenzene

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

preQ₀

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

3-chloro-cis,cis-muconate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

4-chlorosalicylate

5-chlorosalicylate

4-chlorocatechol

Fe³⁺

H⁺

ammonium

K⁺

Fe²⁺

Co²⁺

Mo²⁺

Cu²⁺

hydrogensulfite

selenite

OH^-

superoxide

selenate

nitrate

thiosulfate

sulfite

hydrogencarbonate

molybdate

sulfate

phosphonate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

ferrichrome

glycine betaine

betaine aldehyde

aniline

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

N-acetylputrescine

cadaverine

putrescine

spermidine

S-(hydroxymethyl)glutathione

thiocyanate

methanethiol

glutathione

S-sulfanylglutathione

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

taurine

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

acryloyl-CoA

isobutanoyl-CoA

methylacrylyl-CoA

3-hydroxypropanoyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

(+)-7-epi-jasmonoyl-CoA

choloyl-CoA

salicyl-CoA

gentisyl-CoA

anthraniloyl-CoA

3'-dephospho-CoA

succinyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

malonyl-CoA

(S)-3-aminobutanoyl-CoA

4-hydroxybenzoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

3-methylglutaconyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

trans-feruloyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

phytanoyl-CoA

(S)-malyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

decanoyl-CoA

lauroyl-CoA

octanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

2-hydroxyphytanoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

5-α-pregnane-3,20-dione

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

deoxycholate

cholate

3-dehydrocholate

androsterone

5β-cholestane-3α,7α,12α-triol

5β-cholestane-3α,7α-diol

5-α-androstan-3α,17β-diol

17-β-hydroxy-5-α-androstan-3-one

campest-4-en-3β-ol

7α,12α-dihydroxy-5β-cholestan-3-one

7α-hydroxy-5β-cholestan-3-one

androst-4-ene-3,17-dione

campest-4-en-3-one

5α-androstane-3,17-dione

testosterone

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

riboflavin

nicotinamide

nicotinate

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

FMNH₂

FMN

FAD

FADH₂

(R)-NADHX

(S)-NADHX

NADH

NADPH

NAD⁺

NADP⁺

caldariellaquinone

caldariellaquinol

ubiquinol-7

ubiquinol-9

ubiquinol-10

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-10

3-demethylubiquinol-8

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

isoguanine

8-oxo-GTP

8-oxo-GMP

pppGpp

2'-deoxyadenosine

2'-deoxyinosine

hypoxanthine

cyclic-AMP

dGMP

dAMP

ppGpp

8-oxo-dGTP

8-oxo-dGMP

1-(5-phospho-β-D-ribosyl)-AMP

2'-deoxyguanosine

adenosine 3'-monophosphate

guanosine 3'-monophosphate

dGDP

dIDP

dITP

IDP

ITP

dADP

1-(5-phospho-β-D-ribosyl)-ATP

cyclic-GMP

adenylo-succinate

dATP

dGTP

XMP

GMP

IMP

GDP

5'-deoxyadenosine

ADP

GTP

ATP

AMP

5-fluorocytosine

5-fluorouracil

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

guanosine

inosine

adenosine

uridine

cytidine

2'-deoxycytidine

2'-deoxyuridine

thymidine

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dUTP

dCTP

UTP

CTP

dCMP

dUMP

dTMP

UMP

CMP

dUDP

dCDP

dTDP

CDP

UDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

uridine 3'-monophosphate

cytidine-3'-monophosphate

GDP-4-dehydro-6-deoxy-β-L-galactose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-glucose

GDP-β-L-fucose

ADP-α-D-glucose

preQ₁

cytosine

thymine

uracil

guanine

adenine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

CDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-4-dehydro-6-deoxy-α-D-glucose

coenzyme A

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

(S)-1-pyrroline-5-carboxylate

precorrin-7

precorrin-8x

precorrin-6B

precorrin-6A

precorrin-5

precorrin-4

precorrin-3B

precorrin-3A

precorrin-1

precorrin-2

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(6R)-4a-hydroxy-tetrahydrobiopterin

orotate

2-hydroxychromene-2-carboxylate

quercetin

salicylaldehyde

naphthalene

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

toluene

benzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2,5-xylenol

3-hydroxy-5-methylbenzaldehyde

3-(hydroxymethyl)-5-methylphenol

3,5-xylenol

2,3-dihydroxybenzoate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

catechol

4-methylcatechol

protocatechuate

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

ferulate

5-chloroprotocatechuate

salicylate

3-hydroxy-4-methyl-benzoate

3-hydroxy-5-methyl-benzoate

benzoate

4-aminobenzoate

diacetyl

methylglyoxal

glycolaldehyde

formaldehyde

acetaldehyde

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-ribopyranose

α-L-arabinopyranose

α-D-xylopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

α-D-glucopyranose

β-D-glucopyranose

α-D-galactopyranose

β-D-galactopyranose

β-D-allofuranose

β-D-allopyranose

ethanol

methanol

glycerol

D-arabinitol

D-mannitol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

1-(β-D ribofuranosyl)nicotinamide

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

α,α-trehalose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

D-sedoheptulose 1,7-bisphosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

D-mannonate

L-idonate

D-galactonate

L-gulonate

D-gluconate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

geranyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

6-aminopenicillanate

isopenicillin N

penicillin G

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

allantoate

6-caprolactam

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

chorismate

(3E)-2-oxohex-3-enedioate

succinate

L-aspartate

fumarate

(S)-malate

D-glucarate

α,ω-9Z-octadecenedioate

D-galactarate

(2S,3S)-2-methylcitrate

(2R,3S)-2-methylisocitrate

cis-2-methylaconitate

cis-aconitate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

3-carboxy-cis,cis-muconate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

D-threo-isocitrate

3-oxoadipate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

2-oxobutanoate

glyoxylate

2-oxoglutarate

acetate

formate

propanoate

(R)-lactate

decanoate

7-hydroxylaurate

laurate

octanoate

gentisate

4-hydroxybutanoate

(R)-3-hydroxybutanoate

(15Z)-tetracosenoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

linoleate

α-linolenate

stearate

oleate

palmitate

phytenate

(R)-pantoate

L-α-amino-ε-keto-pimelate

L-kynurenine

carbamate

L-2-aminoadipate

L-serine

L-asparagine

glycine

L-threonine

L-tyrosine

L-glutamine

L-cysteine

L-lysine

L-histidine

L-arginine

L-glutamate

L-tryptophan

L-phenylalanine

L-isoleucine

L-leucine

L-valine

L-proline

L-alanine

L-methionine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

cis-4-hydroxy-D-proline

D-lysine

D-aspartate

D-arginine

D-alanine

L-isoglutamine

L,L-diaminopimelate

L-aspartyl-4-phosphate

L-cystathionine

L-ornithine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-aspartate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

L-saccharopine

iminoarginine

seleno-L-homocysteine

3-phospho-L-serine

sarcosine

N-acetyl-L-methionine

N-acetyl-L-glutamate

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

O-phospho-L-homoserine

L-canaline

L-homoserine

L-aspartate 4-semialdehyde

hypoglycin A

1-aminocyclopropane-1-carboxylate

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B