an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(3E)-2-oxopent-3-enoate

4-oxalocrotonate

1-piperideine-2-carboxylate

(2E)-2-hydroxypenta-2,4-dienoate

ammonia

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

5-aminopentanoate

selenodiglutathione

glutathioselenol

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

6-aminohexanoate cyclic dimer

6-oxohexanoate

adipate

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

(S)-4-hydroxy-2-oxohexanoate

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

hydrogen selenide

(S)-ureidoglycolate

5-amino-6-(5-phospho-D-ribitylamino)uracil

2-amino-3-carboxymuconate-6-semialdehyde

preuroporphyrinogen

L-canavanine

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

N-ethylmaleimide

N-ethylsuccinimide

H₂

4-(γ-L-glutamylamino)butanal

4-(γ-L-glutamylamino)butanoate

urea-1-carboxylate

orotidine 5'-phosphate

7,8-diaminopelargonate

pimeloyl-CoA

8-amino-7-oxononanoate

dethiobiotin

3-deoxy-α-D-manno-2-octulosonate

urea

xanthine

(2S)-lactyl-2-diphospho-5'-guanosine

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

2-maleylacetate

3-deoxy-D-manno-octulosonate 8-phosphate

anthranilate

3-hydroxyanthranilate

N-Formyl-L-kynurenine

acetyl phosphate

N-acetyl-D-muramate 6-phosphate

hydroxylamine

(S)-2,3,4,5-tetrahydrodipicolinate

(S)-4-amino-5-oxopentanoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

prephenate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

histidinal

histidinol

3-hydroxypropanoate

2-phosphoglycolate

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

citraconate

(2R,3S)-3-methylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

N-(5-phosphoribosyl)-anthranilate

5-phospho-β-D-ribosylamine

hexulose 6-phosphate

selenophosphate

3-mercaptopyruvate

oxalosuccinate

formamide

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

O-acetyl-L-serine

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

thiamine phosphate

thiamine diphosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

5-amino-6-(5-phospho-D-ribosylamino)uracil

3'-phosphoadenylyl-sulfate

lipid X

lipid A disaccharide (E. coli)

(2S)-2-isopropylmalate

γ-L-glutamyl 5-phosphate

(indol-3-yl)pyruvate

nicotinate adenine dinucleotide

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

coniferaldehyde

autoinducer 2

hydroxypyruvate

tartronate semialdehyde

coproporphyrinogen III

5-enolpyruvoyl-shikimate 3-phosphate

L-β-lysine

4-fumaryl-acetoacetate

homogentisate

4-maleyl-acetoacetate

α-D-ribose-1-methylphosphonate 5-phosphate

5-phospho-α-D-ribose 1,2-cyclic phosphate

β-D-ribosylnicotinate

4-amino-4-deoxychorismate

2,3-didehydroadipyl-CoA

propanoyl phosphate

hypotaurine

5-guanidino-2-oxopentanoate

2,4'-dihydroxyacetophenone

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

2-hydroxy-5-carboxymethylmuconate semialdehyde

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

2-dehydro-3-deoxy-L-rhamnonate

(4Z)-2-oxohept-4-enedioate

(4S)-4-hydroxy-2-oxoheptanedioate

5-carboxymethyl-2-hydroxymuconate

2,6-dioxo-6-phenylhexa-3-enoate

3-(2,3-dihydroxyphenyl)propanoate

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

citrate

L-histidinol phosphate

(2S)-4-acetamido-2-aminobutanoate

ectoine

glutathione disulfide

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

3-dehydroshikimate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

2-iminoacetate

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

N²-succinyl-L-glutamate 5-semialdehyde

N²-succinylglutamate

N²-succinyl-L-arginine

N²-succinyl-L-ornithine

6-aminohexanoate linear dimer

6-aminohexanoate

3-oxocholoyl-CoA

allopregnanolone

deoxycholoyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

(1S,4S)-2,5-dichloro-2,5-cyclohexadiene-1,4-diol

3-dehydroquinate

shikimate

shikimate 3-phosphate

3-phosphooxypyruvate

acetoacetate

2-keto-D-gluconate

2,5-didehydro-D-gluconate

carbonic acid

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

6-amino-2-oxohexanoate

hydrogen peroxide

4-aminobutanoate

succinate semialdehyde

α-ribazole

5,6-dimethylbenzimidazole

β-nicotinate D-ribonucleotide

α-ribazole 5'-phosphate

ethanolamine

S-formylglutathione

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

glycolate

lipid IV_A

(S)-dihydroorotate

4'-phosphopantetheine

5-aminolevulinate

porphobilinogen

(R)-4-phosphopantoate

(R)-4'-phosphopantothenate

N-acetylglutamyl-phosphate

4-hydroxy-2-nonenal

3-oxopropanoate

phosphoenolpyruvate

3-deoxy-D-arabino-heptulosonate 7-phosphate

N-acetyl-L-glutamate 5-semialdehyde

O-ureido-L-homoserine

canavaninosuccinate

L-arginino-succinate

prenyl diphosphate

(R)-mevalonate

(R)-5-phosphomevalonate

(R)-mevalonate diphosphate

isopentenyl diphosphate

3-methyl-2-oxobutanoate

2-dehydropantoate

(R)-pantothenate

α-D-glucosamine 1-phosphate

carbamoyl phosphate

carboxyphosphate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

5-amino-6-(D-ribitylamino)uracil

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

oxaloacetate

DNA without lesion

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1,6-anhydro-N-acetyl-β-muramate

glycerone phosphate

quinolinate

7-carboxy-7-deazaguanine

5-methylcytosine

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

propionamide

(indol-3-yl)acetamide

acrylamide

acrylate

4-guanidinobutyramide

4-guanidinobutanoate

H₂O

S-ribosyl-L-homocysteine

(R)-1-amino-2-propanol O-2-phosphate

CO₂

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

nitrous oxide

hydrogen cyanide

adenosylcobinamide-GDP

cob(I)inamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide

adenosyl-cobinamide phosphate

cob(I)yrinate a,c-diamide

cob(I)alamin

adenosylcobalamin

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

adenosyl-cob(III)yrinate a,c-diamide

adenosylcobyrate

protoheme

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

siroheme

S⁰

hydrogen sulfide

oxygen

2-iminosuccinate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-ureidoglycine

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(S)-2-hydroxyglutarate

acrylonitrile

(indole-3-yl)acetonitrile

preQ₀

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

2,5-dichloro-p-quinone

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

2,5-dichloro-p-quinol

Fe³⁺

H⁺

ammonium

Fe²⁺

sulfate

hydrogensulfite

selenite

OH^-

superoxide

thiosulfate

selenide

sulfite

nitrite

hydrogencarbonate

selenate

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

(2Z)-2-aminobut-2-enoate

putrescine

spermidine

cadaverine

betaine aldehyde

glycine betaine

S-(hydroxymethyl)glutathione

thiocyanate

methanethiol

glutathione

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

taurine

sulfoacetaldehyde

2-sulfinoacetaldehyde

L-cysteate

3-sulfopyruvate

3-sulfocatechol

(R)-S-lactoylglutathione

cis-dienelactone

trans-dienelactone

2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

methylacrylyl-CoA

3-methylglutaconyl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

isobutanoyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

malonyl-CoA

succinyl-CoA

choloyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3'-dephospho-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

phenylacetyl-CoA

4-hydroxybenzoyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(S)-malyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

hexadecanedioyl-CoA

3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

methane

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

5-α-pregnane-3,20-dione

cholest-4-en-3-one

cholest-dien-3-one

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

deoxycholate

cholate

3-dehydrocholate

androsterone

5β-cholestane-3α,7α,12α-triol

5β-cholestane-3α,7α-diol

5-α-androstan-3α,17β-diol

17-β-hydroxy-5-α-androstan-3-one

campest-4-en-3β-ol

7α,12α-dihydroxy-5β-cholestan-3-one

7α-hydroxy-5β-cholestan-3-one

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

campest-4-en-3-one

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

5α-androstane-3,17-dione

testosterone

(indol-3-yl)acetate

thiamine

nicotinate

riboflavin

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

FAD

FADH₂

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinone

caldariellaquinol

ubiquinol-7

ubiquinol-9

ubiquinol-10

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-10

3-demethylubiquinol-8

isoguanine

8-oxo-dGTP

8-oxo-GTP

ppGpp

pppGpp

dGDP

dIDP

dITP

IDP

dADP

hypoxanthine

2'-deoxyguanosine

cyclic-AMP

cyclic-GMP

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

5'-deoxyadenosine

XMP

GDP

dGTP

dGMP

GMP

dATP

dAMP

ITP

IMP

GTP

ADP

AMP

ATP

5-fluorocytosine

5-fluorouracil

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

guanosine

inosine

adenosine

uridine

cytidine

2'-deoxycytidine

2'-deoxyuridine

thymidine

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

dTTP

dCTP

dUTP

CTP

UTP

dTMP

dCMP

dUMP

UMP

CMP

dUDP

dCDP

dTDP

CDP

UDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

preQ₁

thymine

cytosine

uracil

guanine

adenine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

coenzyme A

oxidized coenzyme F₄₂₀-0

(S)-1-pyrroline-5-carboxylate

precorrin-1

precorrin-2

sirohydrochlorin

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydromonapterin

7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

5,6,7,8-tetrahydromonapterin

orotate

urate

3-hexaprenyl-4-hydroxybenzoate

biphenyl

4-hydroxybenzoate

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

phenol

biphenyl-2,3-diol

2,3-dihydroxybenzoate

protocatechuate

catechol

4-methylcatechol

3-methylcatechol

3,4-dihydroxyphenylacetate

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

ferulate

4-aminobenzoate

benzoate

diacetyl

methylglyoxal

1-propanal

acetaldehyde

formaldehyde

(S)-lactaldehyde

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

ethanol

glycerol

myo-inositol

1D-myo-inositol 3-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

1-(β-D ribofuranosyl)nicotinamide

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

α-Kdo-(2→6)-lipid IV_A

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

4-phospho-D-erythronate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

geranyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

allantoate

acetamide

6-caprolactam

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

(3E)-2-oxohex-3-enedioate

chorismate

fumarate

succinate

L-aspartate

(S)-malate

α,ω-9Z-octadecenedioate

3-carboxy-cis,cis-muconate

(2R,3S)-2-methylisocitrate

(2S,3S)-2-methylcitrate

cis-aconitate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

D-threo-isocitrate

3-oxoadipate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxoglutarate

pyruvate

2-oxobutanoate

formate

propanoate

acetate

(R)-lactate

7-hydroxylaurate

laurate

octanoate

decanoate

(R)-3-hydroxybutanoate

(15Z)-tetracosenoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

dinor-12-oxo-phytodienoate

linoleate

α-linolenate

stearate

palmitate

oleate

phytenate

(R)-pantoate

L-α-amino-ε-keto-pimelate

L-kynurenine

carbamate

L-serine

L-cysteine

L-asparagine

L-tyrosine

L-glutamine

glycine

L-threonine

L-histidine

L-arginine

L-lysine

L-glutamate

L-selenocysteine

L-isoleucine

L-leucine

L-valine

L-proline

L-phenylalanine

L-alanine

L-tryptophan

L-methionine

(R)-β-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-aspartate

D-proline

D-arginine

D-alanine

D-lysine

L-2,4-diaminobutanoate

L-aspartyl-4-phosphate

L,L-diaminopimelate

L-ornithine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

iminoarginine

L-threonine 3-O-phosphate

3-phospho-L-serine

N-acetyl-L-methionine

N-acetyl-L-glutamate

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

hypoglycin A

O-succinyl-L-homoserine

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-homoserine

L-canaline

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine