an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

oxidized DCPIP

reduced DCPIP

S-ribosyl-L-homocysteine

autoinducer 2

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

selenodiglutathione

glutathioselenol

hydrogen selenide

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(S)-4-hydroxy-2-oxohexanoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

malonate

dialurate

(R)-1-amino-2-propanol O-2-phosphate

1,4-dihydroxy-2-naphthoyl-CoA

1-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

1-(2-amino-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol

glutathione disulfide

7-carboxy-7-deazaguanine

(R)-4'-phosphopantothenoyl-L-cysteine

glutathionylspermidine

1-O-(2-acetamido-2-deoxy-α-D-glucopyranosyl)-1D-myo-inositol 3-phosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

porphobilinogen

1,4-dihydroxy-2-naphthoate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

α-D-glucosamine 1-phosphate

prephenate

N⁵-carboxyaminoimidazole ribonucleotide

7,8-didemethyl-8-hydroxy-5-deazariboflavin

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

preuroporphyrinogen

(S)-mandelate

(R)-mandelate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2,3-epoxy-2,3-dihydrobenzoyl-CoA

cis-3,4-dehydroadipyl-CoA semialdehyde

α-ribazole

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

(2S)-lactyl-2-diphospho-5'-guanosine

hydroxypyruvate

D-erythritol 4-phosphate

mycothione

pimeloyl-CoA

8-amino-7-oxononanoate

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

2-C-methyl-D-erythritol 4-phosphate

N-(5-phosphoribosyl)-anthranilate

7,8-diaminopelargonate

dethiobiotin

quinolinate

histidinal

histidinol

L-histidinol phosphate

imidazole acetol-phosphate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

nicotinate adenine dinucleotide

(S)-2-amino-6-oxohexanoate

4-methyl-3-oxoadipate

5-oxo-L-proline

3-ureidopropanoate

barbiturate

ureidomalonate

β-D-ribosylnicotinate

β-D-fructose 2,6-bisphosphate

secologanin

3-α(S)-strictosidine

L-gulono-1,4-lactone

coenzyme B

methanophenazine

CoB-CoM heterodisulfide

dihydromethanophenazine

2-phosphoglycolate

5-guanidino-2-oxopentanoate

oxalosuccinate

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

hexulose 6-phosphate

tryptamine

5-hydroxyindole acetaldehyde

3,4-dihydroxyphenylacetaldehyde

4-acetamidobutanal

5-methoxytryptamine

5-methoxyindoleacetaldehyde

3-methoxy-4-hydroxyphenylglycolaldehyde

urea

urea-1-carboxylate

coproporphyrinogen III

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

isoquinoline

isoquinolin-2(1H)-one

acetyl phosphate

4-maleyl-acetoacetate

4-fumaryl-acetoacetate

squalene

hop-22(29)-ene

2,3,5,6-tetracholorophenol

L-β-lysine

formamide

3-maleylpyruvate

3-fumarylpyruvate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

2-chloro-4-methyl-cis,cis-muconate

4-methylmuconolactone

4-chloro-2-methyl-cis,cis-muconate

cyclohex-1,5-diene-1-carbonyl-CoA

4'-phosphopantetheine

selenophosphate

diethylthiophosphate

diethylphosphate

dimethylthiophosphate

6-phospho D-glucono-1,5-lactone

5-amino-6-(D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

(R)-4-phosphopantoate

carboxyphosphate

(S)-dihydroorotate

3-dehydroshikimate

3-dehydroquinate

shikimate

xanthine

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

shikimate 3-phosphate

L-canavanine

canavaninosuccinate

L-arginino-succinate

O-ureido-L-homoserine

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

DNA without lesion

methylsalicylate

cis,cis-muconate

3-methylmuconolactone

4-methyl-3-oxoadipate-enol-lactone

muconolactone

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

2-hydroxy-6-oxohepta-2,4-dienoate

carbamoyl phosphate

2-dehydropantoate

oxalate

D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

D-erythro-imidazole-glycerol-phosphate

anthranilate

3-hydroxyanthranilate

N-Formyl-L-kynurenine

creatinine

γ-L-glutamyl 5-phosphate

(4-hydroxyphenyl)acetate

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

β-nicotinate D-ribonucleotide

salicyl alcohol

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

4-hydroxy-2-nonenal

L-tartrate

meso-tartrate

2-hydroxy-3-oxosuccinate

succinate semialdehyde

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

4-aminobutanoate

6-deoxyerythronolide B

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7-α,12-α-dihydroxy-3-oxochol-4-enoate

12-α-hydroxy-3 oxochola-4,6-dienoate

isochorismate

3-phosphooxypyruvate

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

2-(4-hydroxyphenyl)-2-oxoacetate

4-hydroxybenzaldehyde

phenylglyoxylate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

methylamine

N-ethylglycine

ethylamine

2-iminoacetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

(2S)-4-acetamido-2-aminobutanoate

ectoine

5-enolpyruvoyl-shikimate 3-phosphate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

(R)-2,3-dihydroxy-3-methylpentanoate

homogentisate

(2-hydroxyphenyl)acetate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

3-oxopropanoate

(R)-4'-phosphopantothenate

(R)-pantothenate

carbonic acid

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

(2S)-2-isopropylmalate

ammonia

hydroxylamine

lanthionine

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

cyclohexanone

ε-caprolactone

4-amino-4-deoxychorismate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

isopentenyl diphosphate

4-prenylphlorisobutyrophenone

prenyl diphosphate

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

3-oxocholoyl-CoA

allopregnanolone

deoxycholoyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

glycolate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

glycerone phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

orotidine 5'-phosphate

2-maleylacetate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

ethanolamine

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

N-succinyl-L,L-2,6-diaminopimelate

4-imidazolone-5-propanoate

urocanate

tartronate semialdehyde

hydrogen peroxide

CO₂

(E)-3-(methoxycarbonyl)pent-2-enedioate

phosphoenolpyruvate

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

acetoacetate

oxaloacetate

H₂O

citrate

1-deoxy-L-glycero-tetrulose 4-phosphate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(3E)-2-oxopent-3-enoate

5-hydroxyindole thiazolidine carboxylate

4-oxalocrotonate

(2E)-2-hydroxypenta-2,4-dienoate

enol-phenylpyruvate

pyruvic oxime

S-(hydroxymethyl)mycothiol

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

4-oxoglutaramate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

carboxyphosphinopyruvate

3-(hydroxyphosphinoyl)pyruvate

1-carboxyvinyl carboxyphosphonate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

adenosylcobyrate

cobalt-precorrin-6B

cobalt-precorrin-5B

cobalt-precorrin-6A

adenosylcobinamide-GDP

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

Mg-protoporphyrin

protoheme

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

protoporphyrin IX

(Z,Z)-bilirubin-IX α

(Z,Z)-biliverdin-IX α

hydrogen sulfide

oxygen

2-iminobutanoate

2-iminosuccinate

2-chloroacetate

sn-glycerol 1-phosphate

sn-glycerol 3-phosphate

2-O-(α-D-glucopyranosyl)-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-3-phospho-D-glycerate

2-[2-O-(α-D-mannopyranosyl)-(1→2)-α-D-glucopyranosyl]-D-glycerate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-O-(α-D-glucopyranosyl)-3-phospho-D-glycerate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2S)-2-phospholactate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

CMP-N-acetyl-β-neuraminate

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

(S)-3-hydroxy-isobutanoate

(S)-2-hydroxyglutarate

preQ₀

parathion

paraoxon

4-nitrophenol

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

N-acetyl-β-neuraminate

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5-chloro-2-methyl-dienelactone

5-chloro-2-methyl-maleylacetate

2-chloro-3-methyl-dienelactone

2-chloro-3-methyl-maleylacetate

2-chloro-5-methyl-dienelactone

2-chloro-5-methyl-maleylacetate

3-chloro-2-methyl-dienelactone

3-chloro-2-methyl-maleylacetate

5-chloromaleylacetate

2-chloromaleylacetate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

3-chloro-cis,cis-muconate

2,5-dichloro-4-methyl-muconolactone

2-chloro-2-(2-chloro-5-oxofuran-2-yl)acetate

2,3-dichloro-cis,cis-muconate

3,5-dichloro-2-methyl-muconolactone

2,5-dichloro-3-methyl-muconate

3,6-dichloro-3a-methyl-dihydro-3H-furo[3,2-b]furan-2,5-dione

2,5-dichloro-3-methyl-muconolactone

(+)-5-chloromuconolactone

2-(2,4-dichloro-5-oxofuran-2-yl)propanoate

3,5-dichloro-2-methyl-muconate

2-chloro-2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

2,3-dichloro-5-methyl-muconate

(+)-2-chloromuconolactone

2-chloro-cis,cis-muconate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

(1R,2S)-3,4-dichloro-6-methylcyclohexa-3,5-diene-1,2-diol

3,4-dichloro-6-methylcatechol

3,4-dichlorotoluene

5-chloro-3-methylcatechol

3,6-dichloro-4-methylcatechol

(1R,2S)-3,6-dichloro-4-methylcyclohexa-3,5-diene-1,2-diol

2,5-dichlorotoluene

2,4-dichlorotoluene

(1R,2S)-4,6-dichloro-3-methylcyclohexa-3,5-diene-1,2-diol

4,6-dichloro-3-methylcatechol

4,5-dichlorobenzene-1,2-diol

pentachlorophenol

Fe³⁺

H⁺

ammonium

K⁺

Co²⁺

Fe²⁺

Mg²⁺

Mo²⁺

selenite

OH^-

selenide

selenate

superoxide

molybdate

hydrogencarbonate

thiosulfate

sulfite

sulfate

nitrate

hydrogensulfite

phosphate

triphosphate

diphosphate

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycine betaine

betaine aldehyde

(2Z)-2-aminobut-2-enoate

N-acetylputrescine

spermidine

putrescine

3-acetylamino-4-hydroxybenzoate

3-acetylamino-4-hydroxybenzaldehyde

tyramine

2-phenylethylamine

3-amino-4-hydroxybenzoate

3-amino-4-hydroxybenzaldehyde

serotonin

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

S-trans-1-propenyl-L-cysteine

S-(hydroxymethyl)glutathione

deacetylmycothiol

mycothiol

methanethiol

glutathione

thiocyanate

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

coenzyme M

L-cysteate

3-sulfopyruvate

dodecyl sulfate

3-sulfocatechol

(R)-S-lactoylglutathione

3-sulfino-L-alanine

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

all-trans-retinyl palmitate

erythronolide B

3-α-mycarosylerythronolide B

erythromycin D

2-methyl-trans-dienelactone

2-methyl-cis-dienelactone

5-chloro-trans-dienelactone

5-chloro-3-methyl-cis-dienelactone

2-chloro-4-methyl-cis-dienelactone

2-(2-chloro-4-methyl-5-oxofuran-2-yl)acetate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

(3R)-3-isopropenyl-6-oxoheptanoyl-CoA

(3S)-3-isopropenyl-6-oxoheptanoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

2-trans, 4-cis-undecadienoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

benzoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

formyl-CoA

oxalyl-CoA

succinyl-CoA

4-hydroxybenzoyl-CoA

phenylacetyl-CoA

malonyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

choloyl-CoA

isobutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

3'-dephospho-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

18-hydroxylinoleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxyoleoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

octanoyl-CoA

lauroyl-CoA

decanoyl-CoA

cis-vaccenoyl-CoA

palmitoleoyl-CoA

myristoyl-CoA

stearoyl-CoA

palmitoyl-CoA

pristanoyl-CoA

3-oxoadipyl-CoA

4-methyl-3-oxoadipyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

cholest-dien-3-one

3-oxo-4-pregnene-20-carboxyl-CoA

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

cholest-4-en-3-one

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

5-α-pregnane-3,20-dione

deoxycholate

cholate

3-dehydrocholate

androsterone

5β-cholestane-3α,7α,12α-triol

5β-cholestane-3α,7α-diol

5-α-androstan-3α,17β-diol

cholesterol

cholest-5-en-3-one

17-β-hydroxy-5-α-androstan-3-one

campest-4-en-3β-ol

7α,12α-dihydroxy-5β-cholestan-3-one

7α-hydroxy-5β-cholestan-3-one

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

9α-hydroxyandrosta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

androsta-1,4-diene-3,17-dione

campest-4-en-3-one

5α-androstane-3,17-dione

testosterone

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

thiamine

nicotinate

riboflavin

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

menadione

FADH₂

FAD

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

NADPH

NADH

NADP⁺

NAD⁺

caldariellaquinone

caldariellaquinol

ubiquinol-7

ubiquinol-9

ubiquinol-8

ubiquinol-10

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-9

3-demethylubiquinol-8

3-demethylubiquinol-10

2'-deoxyadenosine

2'-deoxyinosine

dIDP

dITP

IDP

2'-deoxyguanosine

pppGpp

ppGpp

cyclic-AMP

XMP

dGMP

dAMP

ITP

5'-deoxyadenosine

hypoxanthine

GMP

IMP

adenylo-succinate

dATP

dADP

dGTP

dGDP

GTP

GDP

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

AMP

ATP

ADP

isoguanine

8-oxo-dGTP

8-oxo-GTP

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

xanthosine

guanosine

inosine

adenosine

uridine

cytidine

2'-deoxycytidine

2'-deoxyuridine

thymidine

cyclic di-3',5'-guanylate

5-hydroxy-CTP

5-hydroxy-CMP

2-hydroxy-dATP

dTTP

dCTP

dUTP

CTP

UTP

dCMP

dUMP

dTMP

UMP

CMP

dTDP

dCDP

dUDP

CDP

UDP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

GDP-α-D-mannuronate

GDP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

N¹-ethyladenine

N3-methylcytosine

N¹-methyladenine

cytosine

thymine

uracil

adenine

guanine

5,6-dihydrouracil

5,6-dihydrothymine

UDP-α-D-glucose

CDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine 3'-phosphate

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-galactose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-D-desosamine

dTDP-β-L-mycarose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

molybdopterin

coenzyme A

oxidized coenzyme F₄₂₀-0

MoO₂-molybdopterin cofactor

(S)-1-pyrroline-5-carboxylate

precorrin-6A

precorrin-1

precorrin-2

precorrin-3A

precorrin-3B

precorrin-4

precorrin-5

precorrin-6B

precorrin-7

precorrin-8x

hydantoin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

molybdopterin adenine dinucleotide

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

orotate

3-hexaprenyl-4-hydroxybenzoate

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxyacetophenone

4-hydroxybenzoate

metanephrine

normetanephrine

amino-parathion

methyl parathion

(4-hydroxyphenyl)acetaldehyde

phenylacetaldehyde

benzaldehyde

(indol-3-yl)acetaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

4-aminophenol

phenol

hydroquinone

2,3-dihydroxybenzoate

dopamine

(R)-adrenaline

(R)-noradrenaline

3,4-dihydroxyphenylglycolaldehyde

4-methylcatechol

3-methylcatechol

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

catechol

protocatechuate

dimeric urushiol peroxide

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

2,6-dichlorohydroquinone

2,3,6-trichlorohydroquinone

2,3,5,6-tetrachlorohydroquinone

menadiol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

salicylate

benzoate

4-aminobenzoate

diacetyl

acetone

methylglyoxal

glycolaldehyde

butan-1-al

1-propanal

formaldehyde

acetaldehyde

1-octanal

(S)-lactaldehyde

phytenal

D-glyceraldehyde

L-glyceraldehyde

α-D-ribofuranose

α-L-arabinopyranose

α-L-rhamnopyranose

β-L-rhamnopyranose

α-D-galactopyranose

β-D-galactopyranose

butan-1-ol

methanol

ethanol

1-dodecanol

1-octanol

phytol

sphingosine

sphingosine 1-phosphate

glycerol

erythritol

L-iditol

D-sorbitol

D-mannitol

myo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

1D-myo-inositol 4-monophosphate

1D-myo-inositol 1-monophosphate

1D-myo-inositol 2-monophosphate

1D-myo-inositol 6-monophosphate

1D-myo-inositol 5-monophosphate

1D-myo-inositol 3-monophosphate

(1R,2R,4S)-limonene-1,2-diol

(1S,2S,4R)-limonene-1,2-diol

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

α,α-trehalose

keto-L-sorbose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

keto-L-rhamnulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

D-ribulose-1,5-bisphosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

N,N'-diacetylchitobiose 6'-phosphate

N-monoacetylchitobiose 6'-phosphate

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

4-phospho-D-erythronate

D-sedoheptulose 1,7-bisphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

salicin 6-phosphate

arbutin-6-phosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

methyl β-D-glucoside 6-phosphate

L-gulonate

D-gluconate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

dioleoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

geranyl diphosphate

(4R)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

(4S)-7-hydroxy-4-isoprenyl-7-methyl-2-oxo-oxepanone

trans,octacis-decaprenyl phosphate

(+)-(1S,4R)-limonene-1,2- epoxide

(1S,4R)-1-hydroxymenth-8-en-2-one

(1R,4S)-1-hydroxymenth-8-en-2-one

di-trans,octa-cis-undecaprenyl phosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

phlorisovalerophenone

deoxyhumulone

deoxycohumulone

4-prenylphlorisovalerophenone

iron(III) dicitrate

6-aminopenicillanate

isopenicillin N

penicillin G

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

(3E)-2-oxohex-3-enedioate

3-methyl-cis,cis-muconate

chorismate

maleate

fumarate

succinate

L-aspartate

(S)-malate

α,ω-9Z-octadecenedioate

3-(carbamoylamino)-2-methylpropanoate

3-carboxy-cis,cis-muconate

cis-aconitate

trans-aconitate

D-threo-isocitrate

3-oxoadipate

(3R)-3-isopropenyl-6-oxoheptanoate

(3S)-3-isopropenyl-6-oxoheptanoate

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

2-oxobutanoate

glyoxylate

2-oxoglutarate

acetate

formate

propanoate

(S)-lactate

(R)-lactate

octanoate

7-hydroxylaurate

laurate

decanoate

gentisate

(15Z)-tetracosenoate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

oleate

α-linolenate

linoleate

stearate

palmitate

phytenate

(R)-pantoate

5-deoxy-D-glucuronate

L-2-aminoadipate

carbamate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-serine

L-tyrosine

L-asparagine

L-glutamine

L-threonine

glycine

L-cysteine

L-arginine

L-lysine

L-histidine

L-glutamate

L-valine

L-isoleucine

L-phenylalanine

L-tryptophan

L-proline

L-leucine

L-alanine

L-methionine

creatine

(R)-β-lysine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

D-glutamate

D-arginine

D-alanine

L-2,4-diaminobutanoate

L-cystathionine

L-aspartyl-4-phosphate

L,L-diaminopimelate

L-ornithine

L-isoglutamine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

L-saccharopine

iminoarginine

3-phospho-L-serine

S-methyl-L-cysteine

(2S, 3S)-3-methylaspartate

sarcosine

N-carbamoylglycine

N-acetyl-L-glutamate

N-acetyl-L-methionine

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

L-citrulline

hypoglycin A

L-canaline

O-phospho-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine