an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

pyruvic oxime

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

enol-phenylpyruvate

4-oxoglutaramate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

2,5-dioxopentanoate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

S-ribosyl-L-homocysteine

autoinducer 2

dialurate

selenodiglutathione

glutathioselenol

hydrogen selenide

1,3-propanediol

glutathione disulfide

(S)-5-amino-3-oxohexanoate

(3S,5S)-3,5-diaminohexanoate

1,6-anhydro-N-acetyl-β-muramate

urea-1-carboxylate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

lipid X

lipid A disaccharide (E. coli)

lipid IV_A

3-deoxy-α-D-manno-2-octulosonate

3-deoxy-D-manno-octulosonate 8-phosphate

DNA without lesion

digallate

gallate

aminoacetone

thiamine diphosphate

2-iminoacetate

carbon monoxide

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

5-phospho-β-D-ribosylamine

(indol-3-yl)acetamide

acrylamide

propionamide

butyramide

histidinal

imidazole acetol-phosphate

D-erythro-imidazole-glycerol-phosphate

3-hydroxypropanal

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

N¹-(5-phospho-β-D-ribosyl)glycinamide

1,4-dihydroxy-2-naphthoate

creatinine

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

6-phospho D-glucono-1,5-lactone

D-gluconate 6-phosphate

butanoyl phosphate

diethylphosphate

diethylthiophosphate

dimethylthiophosphate

L-selenocystathionine

γ-L-glutamyl 5-phosphate

nicotinate adenine dinucleotide

anthranilate

N-(5-phosphoribosyl)-anthranilate

prephenate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

L-arginino-succinate

canavaninosuccinate

α-D-glucosamine 1-phosphate

ethanolamine

4-aminobutanoate

succinate semialdehyde

L-canavanine

urea

D-glycero-β-D-manno-heptose 1,7-bisphosphate

D-glycero-β-D-manno-heptose 1-phosphate

4-imidazolone-5-propanoate

urocanate

L-β-lysine

orotidine 5'-phosphate

carboxyphosphate

(S)-dihydroorotate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

carbamoyl phosphate

O-ureido-L-homoserine

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

L-histidinol phosphate

histidinol

(R)-1-amino-2-propanol O-2-phosphate

7-carboxy-7-deazaguanine

5-enolpyruvoyl-shikimate 3-phosphate

isopentenyl diphosphate

prenyl diphosphate

shikimate 3-phosphate

3-dehydroquinate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

ManNAc-GlcNAc-PP-undecaprenol

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-ribulose 1-phosphate

deethylsimazine

N-ethylammeline

2-maleylacetate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

2-C-methyl-D-erythritol 4-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

5-amino-6-(D-ribitylamino)uracil

4'-phosphopantetheine

acetyl phosphate

propanoyl phosphate

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

porphobilinogen

preuroporphyrinogen

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

tartronate semialdehyde

L-tartrate

formamide

S-methyl-5'-thioinosine

S-Inosyl-L-homocysteine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

2-dehydropantoate

5,6-dimethylbenzimidazole

(S)-2-amino-6-oxohexanoate

carboxynorspermidine

norspermidine

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

pimelate

pimeloyl-CoA

dethiobiotin

3-phosphooxypyruvate

shikimate

3-dehydroshikimate

(R)-pantothenate

(R)-4'-phosphopantothenate

(L-seryl)adenylate

(2,3-dihydroxybenzoyl)adenylate

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

3-deoxy-D-arabino-heptulosonate 7-phosphate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

O-acetyl-L-serine

3-ureidopropanoate

mesaconate

citrate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

3-oxopropanoate

hydroxypyruvate

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

5-dehydro-4-deoxy-D-glucarate

3-deoxy-D-glycero-2,5-hexodiulosonate

2-deoxygluconate

3-dehydro-2-deoxy-D-gluconate

xanthine

α-ribazole 5'-phosphate

α-ribazole

4-amino-4-deoxychorismate

ammonia

hydroxylamine

N-acetyl-D-muramate 6-phosphate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

coproporphyrinogen III

β-D-ribosylnicotinate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

glycolate

H₂

5-oxo-L-proline

hydrogen peroxide

β-nicotinate D-ribonucleotide

quinolinate

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

(R)-2,3-dihydroxy-3-methylpentanoate

4-fumaryl-acetoacetate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

4-methyl-2-oxopentanoate

(lipoyl)adenylate

glycerone phosphate

phosphoenolpyruvate

carbonic acid

methylsalicylate

salicyl alcohol

acetoacetate

CO₂

oxaloacetate

(2S)-2-isopropylmalate

2-isopropylmaleate

H₂O

(2R,3S)-3-isopropylmalate

8-amino-7-oxononanoate

S-adenosyl-4-methylsulfanyl-2-oxobutanoate

7,8-diaminopelargonate

DNA with lesion

4-methylphenol

L-homocysteine

phenylacetate

ethylphosphate

phosphonoacetaldehyde

(2-aminoethyl)phosphonate

hydrogen cyanide

N₂

adenosylcobalamin

cob(I)alamin

Mg-protoporphyrin

cobalt-sirohydrochlorin

cobalt-precorrin-2

adenosylcobinamide-GDP

adenosylcobyrate

adenosyl-cobinamide phosphate

cobalt-precorrin-4

cobalt-precorrin-5A

cobalt-precorrin-5B

cobalt-precorrin-6A

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

adenosylcobalamin 5'-phosphate

protoheme

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

uroporphyrinogen-III

protoporphyrinogen IX

siroheme

hydrogen sulfide

oxygen

2-iminosuccinate

2-iminopropanoate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

CMP-N-acetyl-β-neuraminate

(S)-methylmalonate-semialdehyde

ethene

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

parathion

paraoxon

4-nitrophenol

FMNH₂

FMN

FAD

(S)-NADHX

(R)-NADHX

caldariellaquinol

ubiquinol-7

ubiquinol-10

ubiquinol-9

ubiquinol-8

menaquinol-7

menaquinol-8

demethylmenaquinol-7

demethylmenaquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-9

3-demethylubiquinol-8

caldariellaquinone

NADPH

NADH

NADP⁺

NAD⁺

hydroxyl radical

superoxide

(2E,6E)-farnesyl diphosphate

pristanate

N-acetyl-β-neuraminate

Fe³⁺

H⁺

ammonium

Mg²⁺

Co²⁺

Fe²⁺

sulfate

OH^-

sulfite

selenite

selenate

hydrogencarbonate

phosphate

triphosphate

diphosphate

chloride

S-(hydroxymethyl)glutathione

methanethiol

glutathione

S-sulfanylglutathione

5-(2-hydroxyethyl)-4-methylthiazole

4-methyl-5-(2-phosphooxyethyl)thiazole

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

cadaverine

putrescine

spermidine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

3-hexaprenyl-4-hydroxybenzoate

4-hydroxybenzoate

urate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

amino-parathion

methyl parathion

phenol

4-aminophenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

protocatechuate

2,3-dihydroxybenzoate

enterobactin

salicylate

4-aminobenzoate

3-cyanopyridine

acrylonitrile

propionitrile

(indole-3-yl)acetonitrile

preQ₀

n-butyronitrile

(R)-lipoate

coenzyme A

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

thiamine

nicotinamide

nicotinate

riboflavin

pyridoxal

pyridoxine

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

all-trans-retinol

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

trans,octacis-decaprenylphospho-β-D-ribofuranose 5-phosphate

cis-dienelactone

trans-dienelactone

all-trans-retinyl palmitate

(S)-3-aminobutanoyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

phenylacetyl-CoA

isobutanoyl-CoA

3'-dephospho-CoA

4-hydroxybutanoyl-CoA

(R)-2-hydroxyglutaryl-CoA

(E)-glutaconyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

acetyl-CoA

malonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxylinoleoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

pristanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

cis-vaccenoyl-CoA

myristoyl-CoA

palmitoleoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

(3E)-2-oxohex-3-enedioate

chorismate

succinate

fumarate

L-aspartate

(S)-malate

α,ω-9Z-octadecenedioate

D-glucarate

D-galactarate

3-(carbamoylamino)-2-methylpropanoate

3-carboxy-cis,cis-muconate

(1R,2S)-homoisocitrate

cis-homoaconitate

(2R)-homocitrate

3-oxoadipate

pyruvate

acetate

formate

propanoate

(R)-lactate

butanoate

decanoate

laurate

7-hydroxylaurate

octanoate

4-hydroxybutanoate

18-hydroxyoleate

18-hydroxystearate

16-hydroxypalmitate

(15Z)-tetracosenoate

α-linolenate

linoleate

stearate

oleate

palmitate

phytenate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

5-deoxy-D-glucuronate

D-gluconate

orotate

(R)-pantoate

D-mannonate

(S)-1-pyrroline-5-carboxylate

4-deoxy-L-threo-hex-4-enopyranuronate

D-tagaturonate

aldehydo-D-galacturonate

carbamate

D-serine

L-serine

creatine

(R)-β-lysine

β-alanine

(R)-3-amino-2-methylpropanoate

L-proline

glycine

L-alanine

L-glutamine

L-leucine

D-glutamate

L-glutamate

L-histidine

L-arginine

L-lysine

L-tyrosine

L-tryptophan

L-phenylalanine

D-alanine

D-aspartate

S-sulfanyl-L-cysteine

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-saccharopine

L-2-amino-3-oxobutanoate

L-threonine 3-O-phosphate

3-phospho-L-serine

sarcosine

(2S, 3S)-3-methylaspartate

N-carbamoyl-L-aspartate

N-carbamoylglycine

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-methionine

L-isoglutamine

L-cysteine

L-cystathionine

L-asparagine

L-ornithine

L,L-diaminopimelate

L-threonine

L-isoleucine

L-valine

L-citrulline

O-succinyl-L-homoserine

L-cystine

L-canaline

O-phospho-L-homoserine

L-homoserine

L-aspartate 4-semialdehyde

L-glutamate-5-semialdehyde

hypoglycin A

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

meso-diaminopimelate

3-phenyl-2-oxopropanoate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxobutanoate

2-oxoglutarate

hypoglycin B

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

glycerol

D-sorbitol

L-iditol

D-mannitol 1-phosphate

propan-1-ol

butan-1-ol

ethanol

methanol

ethylene glycol

(S)-propane-1,2-diol

(R)-propane-1,2-diol

1D-chiro-inositol

scyllo-inositol

myo-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

1-keto-D-chiro-inositol

geranyl diphosphate

trans,octacis-decaprenyl phosphate

mono-trans,octa-cis-decaprenyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

α-Kdo-(2→6)-lipid IV_A

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

maltotriose

maltotetraose

maltoheptaose

maltohexaose

maltopentaose

β-D-fructofuranose

α-L-rhamnopyranose

β-L-rhamnopyranose

keto-L-sorbose

keto-D-fructose

D-xylulose

D-ribulose

L-ribulose

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

β-D-ribopyranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

N-acetyl-α-D-mannosamine

D-glyceraldehyde

glycolaldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

β-D-allopyranose

β-D-allofuranose

keto-L-rhamnulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (S. aureus)

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

a peptidoglycan dimer (mycobacteria)

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan tetramer with an L,D cross-link (Enterococcus faecium)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

ADP-α-D-glucose

dTDP-α-D-glucose

CDP-α-D-glucose

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

CDP-4-dehydro-6-deoxy-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

5-phospho-α-D-ribose 1-diphosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

D-fructose 6-phosphate

β-D-fructofuranose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

D-ribulose 5-phosphate

L-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

L-rhamnulose 1-phosphate

α-D-galactose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

D-altronate

diacetyl

acetone

methylglyoxal

1-propanal

butan-1-al

formaldehyde

acetaldehyde

(S)-lactaldehyde

(R)-lactaldehyde

precorrin-3A

precorrin-6A

precorrin-6B

precorrin-7

precorrin-8x

precorrin-2

precorrin-1

precorrin-3B

precorrin-4

sirohydrochlorin

hydantoin

dCMP

uracil

dTDP

dTTP

dUDP

CDP

dCDP

dUMP

dTMP

5,6-dihydrouracil

5,6-dihydrothymine

UDP

dCTP

CTP

dUTP

UTP

CMP

UMP

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

thymine

adenine

guanine

hypoxanthine

isoguanine

preQ₁

xanthosine

guanosine

adenosine

inosine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

ITP

ATP

GTP

IDP

ADP

GDP

GMP

IMP

XMP

AMP

dITP

dATP

dGTP

dIDP

dADP

dGDP

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

7,8-dihydroneopterin 3'-triphosphate

6-(hydroxymethyl)-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

8-oxo-GTP

8-oxo-dGTP

ppGpp

1-(5-phospho-β-D-ribosyl)-AMP

pppGpp

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

two adjacent thymidines in DNA

cyclic di-3',5'-guanylate

5-hydroxy-CTP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA