ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12274

enol-phenylpyruvate

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C13702

1-piperideine 6-carboxylate

C3355

(3E)-2-oxopent-3-enoate

C9431

1,2-dihydro-β-NADP

C13855

(2E)-2-hydroxypenta-2,4-dienoate

C1010

ammonia

C4688

glutathioselenol

C4690

selenodiglutathione

C6099

lipid IVA

C13543

mercuriphenyl acetate

C13854

hydrogen selenide

C3338

2-oxoglutaramate

C14005

prephytoene diphosphate

C13729

(2S)-lactyl-2-diphospho-5'-guanosine

C15156

dialurate

C12315

5,6-dimethylbenzimidazole

C11711

(R)-1-amino-2-propanol O-2-phosphate

C12029

S-ribosyl-L-homocysteine

C12324

autoinducer 2

C14202

hexulose 6-phosphate

C15013

2-aminoacetaldehyde

C12213

2-aminomalonate semialdehyde

C1024

aminoacetone

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C11539

xanthine

C285

coenzyme B

C13751

methanophenazine

C283

CoB-CoM heterodisulfide

C12331

dihydromethanophenazine

C2263

4-prenylphlorisobutyrophenone

C11648

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

C3829

5-amino-6-(5-phospho-D-ribitylamino)uracil

C10274

5-amino-6-(5-phospho-D-ribosylamino)uracil

C1407

3-hydroxypropanoate

C13950

pimeloyl-CoA

C1130

8-amino-7-oxononanoate

C11654

selenophosphate

C3482

dihydroxyacetone

C12409

creatinine

C11873

N-succinyl-L,L-2,6-diaminopimelate

C11874

N-succinyl-2-amino-6-ketopimelate

C13955

octadecanal

C6597

3-ureidopropanoate

C13811

tetrahydrogeranylgeranyl diphosphate

C13812

dihydrogeranylgeranyl diphosphate

C13728

7,8-didemethyl-8-hydroxy-5-deazariboflavin

C8938

oxalate

C11869

N2-succinylglutamate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C506

3-ethylmalate

C3259

2-oxovalerate

C12325

1,4-dihydroxy-2-naphthoate

C11754

propanoyl phosphate

C9422

nicotinate adenine dinucleotide

C2346

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

C2364

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

C11946

N-(5-phosphoribosyl)-anthranilate

C1002

anthranilate

C3821

5-methylcytosine

C370

(S)-mandelate

C382

(R)-mandelate

C2580

methylsalicylate

C15056

salicyl alcohol

C295

(R)-4-phosphopantoate

C1268

(R)-4'-phosphopantothenate

C12390

D-erythro-imidazole-glycerol-phosphate

C1108

acetyl phosphate

C1078

(S)-2-amino-6-oxohexanoate

C11760

prephenate

C13192

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C2423

3-methyl-2-butenal

C15238

5-deoxy-α-ribose 1-phosphate

C12492

1,6-anhydro-N-acetyl-β-muramate

C12494

N-acetyl-D-muramate 6-phosphate

C3850

5-amino-6-(D-ribitylamino)uracil

C12848

N5-carboxyaminoimidazole ribonucleotide

C11932

N-acetyl-D-galactosamine 6-phosphate

C15282

D-galactosamine-6-phosphate

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1102

O-acetyl-L-serine

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C1447

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

C15304

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

C3279

2-oxopent-4-enoate

C1391

3-mercaptopyruvate

C4674

glutathione disulfide

C4620

S-formylglutathione

C14181

2-maleylacetate

C13627

DNA without lesion

C12048

γ-L-glutamyl 5-phosphate

C12178

histidinal

C12176

histidinol

C12394

6-phospho D-glucono-1,5-lactone

C13635

β-D-ribosylnicotinate

C11653

shikimate

C3319

4-methyl-2-oxopentanoate

C12192

carbonic acid

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C3888

7-carboxy-7-deazaguanine

C11493

2-phosphoglycolate

C11832

orotidine 5'-phosphate

C12096

isochorismate

C12337

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

C13850

hydrogenobyrinate a,c-diamide

C1519

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

C13630

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

C13546

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

C12350

7,8-diaminopelargonate

C12355

dethiobiotin

C1552

2-(α-hydroxyethyl)thiamine diphosphate

C11604

thiamine diphosphate

C1020

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

C949

lipid X

C10794

lipid A disaccharide (E. coli)

C1528

2-dehydropantoate

C927

carbon monoxide

C13197

2-methyl-1,4-benzoquinone

C13196

methyl-1,4-benzoquinol

C1038

α-ribazole

C1036

α-ribazole 5'-phosphate

C11802

4'-phosphopantetheine

C571

4-hydroxy-2-nonenal

C6361

acetoacetate

C3295

2-keto-D-gluconate

C1454

2,5-didehydro-D-gluconate

C873

coproporphyrinogen III

C11483

glycolate

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1353

3-phosphooxypyruvate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C1196

S-methyl-5'-thioadenosine

C12171

homogentisate

C473

(2-hydroxyphenyl)acetate

C13768

all-trans-13,14-dihydroretinol

C11767

porphobilinogen

C12139

preuroporphyrinogen

C9017

ethyl acetate

C1491

citraconate

C13793

(2R,3S)-3-methylmalate

C11652

shikimate 3-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C6369

(S)-2-aceto-2-hydroxybutanoate

C6359

(S)-2-acetolactate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C11606

thiamine phosphate

C6614

O-ureido-L-homoserine

C12352

(S)-dihydroorotate

C11826

oxalosuccinate

C1321

4-aminobutanoate

C11639

succinate semialdehyde

C6349

3-oxopropanoate

C932

canavaninosuccinate

C933

L-canavanine

C12056

L-arginino-succinate

C13843

cyanate

C14924

carboxyphosphate

C1538

2-C-methyl-D-erythritol 4-phosphate

C192

adenosine 5'-phosphoselenate

C996

adenosine 5'-phosphosulfate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C3417

(S)-3-methyl-2-oxopentanoate

C11857

β-nicotinate D-ribonucleotide

C11715

quinolinate

C11930

N-acetylglutamyl-phosphate

C12351

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C12125

imidazole acetol-phosphate

C12044

L-histidinol phosphate

C3262

3-methyl-2-oxobutanoate

C7865

urea

C6444

oxaloacetate

C12369

3-dehydroquinate

C1431

3-dehydroshikimate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C3656

D-gluconate 6-phosphate

C1265

4-phosphooxy-L-threonine

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1184

5-phospho-β-D-ribosylamine

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C12214

(S)-4-amino-5-oxopentanoate

C1231

5-aminolevulinate

C13851

hydrogenobyrinate

C10349

glycerone phosphate

C12364

isopentenyl diphosphate

C14074

prenyl diphosphate

C12218

α-D-glucosamine 1-phosphate

C11479

phosphoenolpyruvate

C2191

carbamoyl phosphate

C11800

(R)-pantothenate

C12162

hydrogen peroxide

C891

citrate

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C928

CO2

C1438

(2S)-2-isopropylmalate

C13417

2-isopropylmaleate

C11543

H2O

C1530

(2R,3S)-3-isopropylmalate

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal

C10799

DNA with lesion

C12247

L-homocysteine

C11480

phenylacetate

C803

ethylphosphate

C3940

carboxyphosphinopyruvate

C4751

3-(hydroxyphosphinoyl)pyruvate

C3869

1-carboxyvinyl carboxyphosphonate

C3865

phosphonoacetaldehyde

C12116

(2-aminoethyl)phosphonate

C13422

hydrogen cyanide

C5221

adenosylcobalamin

C9874

cob(I)alamin

C9855

adenosyl-cobinamide phosphate

C9813

cobalt-precorrin-5B

C9818

cobalt-precorrin-6A

C9845

cobalt-sirohydrochlorin

C9799

cobalt-precorrin-2

C9800

adenosylcobyrate

C9828

cob(II)yrinate a,c-diamide

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C9860

131-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

C9835

131-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

C9812

magnesium-protoporphyrin IX 13-monomethyl ester

C9841

3,8-divinyl chlorophyllide a

C9817

3,8-divinyl protochlorophyllide a

C9850

chlorophyllide a

C9836

protochlorophyllide a

C9869

cob(I)inamide

C9807

adenosylcobinamide

C9823

cob(I)yrinate a,c-diamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9865

Mg-protoporphyrin

C6624

protoheme

C7662

uroporphyrinogen-I

C7672

coproporphyrinogen I

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7676

protoporphyrin IX

C6382

red chlorophyll catabolite

C6408

(Z,Z)-biliverdin-IX α

C3303

(2R,3E)-phycocyanobilin

C3300

(2R,3Z)-phycocyanobilin

C9877

pheophorbide a

C7118

hydrogen sulfide

C7111

Hg0

C7121

oxygen

C6708

2-iminopropanoate

C6599

2-iminobutanoate

C6596

2-iminosuccinate

C11281

2-chloroacetate

C8420

sn-glycerol 1-phosphate

C8419

sn-glycerol 3-phosphate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C2155

(2S)-2-phospholactate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C2017

α-D-glucosamine 6-phosphate

C6755

(R)-citramalate

C6741

(S)-methylmalonate-semialdehyde

C6309

(S)-4-hydroxymandelate

C6311

(R)-4-hydroxymandelate

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C8185

(S)-2-hydroxyglutarate

C12545

ethene

C6178

heptadecane

C11510

5-chloro-5-deoxy-D-ribonate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C13114

1-chloro-2,4-dinitrobenzene

C4658

2,4-dinitrophenyl-S-glutathione

C10053

FAD

C10049

FMNH2

C10052

FMN

C5394

(R)-NADHX

C5392

(S)-NADHX

C1869

caldariellaquinol

C5535

ubiquinol-7

C5563

ubiquinol-10

C5551

ubiquinol-9

C5543

ubiquinol-8

C1680

menaquinol-8

C1863

demethylmenaquinol-8

C1865

3-demethylubiquinol-7

C1866

3-demethylubiquinol-10

C1868

3-demethylubiquinol-9

C1867

3-demethylubiquinol-8

C10048

caldariellaquinone

C14497

NADPH

C14500

NADH

C4018

NADP+

C4020

NAD+

C11516

glycine betaine

C8965

hydroxyl radical

C8962

nitric oxide

C8958

superoxide

C9077

(2E,6E)-farnesyl diphosphate

C2774

pristanate

C7864

Fe3+

C4328

ammonium

C4318

K+

C4320

H+

C11002

Hg2+

C11006

Co2+

C11023

Fe2+

C11009

Mg2+

C7034

hydrogensulfite

C7017

selenite

C7025

OH-

C7030

nitrate

C7022

selenide

C7057

molybdate

C7014

sulfate

C7024

thiosulfate

C7016

sulfite

C7020

selenate

C7036

hydrogencarbonate

C7028

nitrite

C6097

phosphate

C6094

triphosphate

C6093

diphosphate

C7006

chloride

C4606

S-(hydroxymethyl)glutathione

C1476

γ-L-glutamyl-[(S)-allyl]-L-cysteine

C2490

S-allyl-L-cysteine

C1461

γ-L-glutamyl-(S)-methyl-L-cysteine

C1464

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

C4716

S-trans-1-propenyl-L-cysteine

C3998

methanethiol

C7708

glutathione amide perthiol

C7731

glutathione amide

C7690

glutathione amide disulfide

C3978

thiocyanate

C4678

glutathione

C5759

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C12629

coenzyme M

C12587

L-cysteate

C12637

3-sulfopyruvate

C2209

(2R)-3-sulfolactate

C7994

(2R)-phospho-3-sulfolactate

C4580

(R)-S-lactoylglutathione

C2169

betaine aldehyde

C6524

2-aminoprop-2-enoate

C6526

(2Z)-2-aminobut-2-enoate

C10301

agmatine

C3580

dehydrospermidine

C3576

cadaverine

C3574

spermidine

C3548

putrescine

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C1434

D-alanyl-D-alanine

C8518

γ-L-glutamyl-L-cysteine

C6530

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C7019

benzene

C7060

3-hexaprenyl-4-hydroxybenzoate

C6934

4-hydroxybenzoate

C3093

urate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C2886

2-methyl-6-phytyl-1,4-benzoquinol

C2885

2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol

C2889

2,3-dimethyl-6-phytyl-1,4-benzoquinol

C2913

2-methyl-6-geranylgeranyl-1,4-benzoquinol

C2915

menadiol

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C11661

(+)-taxifolin

C11659

(+)-dihydrokaempferol

C8056

(2R,3S,4S)-leucocyanidin

C8060

(2R,3S,4S)-leucopelargonidin

C11409

2,3-dihydroxybenzoate

C2761

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

C5781

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

C5778

dimeric urushiol peroxide

C11429

salicylate

C8974

4-aminobenzoate

C13354

preQ0

C13366

(indole-3-yl)acetonitrile

C12718

molybdopterin

C10614

coenzyme A

C2232

oxidized coenzyme F420-0

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C10597

7,8-dihydrofolate monoglutamate

C14624

5,10-methylene-tetrahydromethanopterin

C14603

tetrahydromethanopterin

C6007

MoO2-molybdopterin cofactor

C10988

riboflavin

C10982

nicotinate

C4188

pyridoxamine 5'-phosphate

C4214

pyridoxine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C10966

all-trans-retinol

C10143

menadione

C5855

γ-tocotrienol

C5856

δ-tocotrienol

C5178

β-tocopherol

C5174

α-tocopherol

C5166

δ-tocopherol

C5170

γ-tocopherol

C6358

glycocholate

C6332

cholate

C9098

methyl (indol-3-yl)acetate

C9096

(indol-3-yl)acetate

C5369

geranyl acetate

C9016

butyl acetate

C5569

(9S,10S)-10-hydroxy-9-(phosphooxy) octadecanoate

C3201

(9S,10S)-9,10-dihydroxyoctadecanoate

C10102

cis-dienelactone

C10100

trans-dienelactone

C2598

D-glucono-1,5-lactone

C3727

all-trans-retinyl palmitate

C5309

3-hydroxypropanoyl-CoA

C4901

succinyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C5014

phenylacetyl-CoA

C5314

2-methylacetoacetyl-CoA

C4937

3'-dephospho-CoA

C5298

acetyl-CoA

C4913

malonyl-CoA

C11400

phytenoyl-CoA

C10623

phytanoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C5635

oleoyl-CoA

C11187

7-hydroxylauroyl-CoA

C491

18-hydroxyoleoyl-CoA

C480

18-hydroxystearoyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C1177

propanoyl-CoA

C14697

decanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C3141

2-hydroxyphytanoyl-CoA

C2873

pristanoyl-CoA

C5885

stearoyl-CoA

C5892

palmitoyl-CoA

C2008

acetoacetyl-CoA

C2009

3-oxopentanoyl-CoA

C1626

isopenicillin N

C1611

penicillin N

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8033

5-amino-4-imidazolecarboxyamide

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8950

chorismate

C6442

succinate

C6443

fumarate

C5596

L-aspartate

C2802

(S)-malate

C8923

α,ω-9Z-octadecenedioate

C5463

3-(carbamoylamino)-2-methylpropanoate

C13463

(2R,3S)-2-methylisocitrate

C8544

cis-2-methylaconitate

C8534

cis-aconitate

C8531

D-threo-isocitrate

C3308

pyruvate

C11517

acetate

C3421

formate

C6186

(S)-lactate

C6185

(R)-lactate

C3412

decanoate

C3409

octanoate

C3415

laurate

C3207

7-hydroxylaurate

C538

18-hydroxyoleate

C550

18-hydroxystearate

C553

16-hydroxypalmitate

C13266

(15Z)-tetracosenoate

C10658

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

C10642

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

C10672

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

C13300

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

C5935

dinor-12-oxo-phytodienoate

C10639

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

C10670

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

C10655

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

C10590

α-linolenate

C6379

linoleate

C3387

stearate

C3383

palmitate

C13210

oleate

C13260

phytenate

C11481

orotate

C11485

D-gluconate

C11482

(R)-pantoate

C4985

(S)-1-pyrroline-5-carboxylate

C5032

carbamate

C5579

L-serine

C11443

creatine

C11441

β-alanine

C11434

(R)-3-amino-2-methylpropanoate

C5588

L-leucine

C5597

L-alanine

C5581

L-proline

C5609

L-glutamine

C12067

glycine

C8797

D-glutamate

C5607

L-glutamate

C5584

L-lysine

C5605

L-histidine

C5642

L-arginine

C5573

L-tyrosine

C2469

L-phenylalanine

C5575

L-tryptophan

C8799

D-alanine

C12165

2-hydroxy-5-oxoproline

C12201

L-2-amino-3-oxobutanoate

C12065

L-saccharopine

C12073

L-aspartyl-4-phosphate

C3402

3-phospho-L-serine

C6936

S-methyl-L-cysteine

C3628

sarcosine

C13322

N-carbamoyl-L-aspartate

C13320

N-carbamoylglycine

C15000

N-acetyl-L-ornithine

C14973

N-acetyl-L-glutamate

C10821

trans-4-hydroxy-L-proline

C5583

L-methionine

C5580

L,L-diaminopimelate

C5612

L-cysteine

C5603

L-isoleucine

C5571

L-valine

C5643

L-asparagine

C5577

L-threonine

C12231

L-ornithine

C12303

L-citrulline

C12233

L-glutamate-5-semialdehyde

C12245

L-homoserine

C12237

L-canaline

C12229

O-phospho-L-homoserine

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12239

L-aspartate 4-semialdehyde

C5585

meso-diaminopimelate

C9505

L-allo-threonine

C3315

3-(4-hydroxyphenyl)pyruvate

C3345

3-phenyl-2-oxopropanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3257

2-oxobutanoate

C3351

glyoxylate

C3301

2-oxoglutarate

C11222

sn-glycero-3-phosphoethanolamine

C3731

glycerol

C6569

D-sorbitol

C6571

L-iditol

C3449

butan-1-ol

C3450

ethanol

C3448

methanol

C9510

geraniol

C10527

myo-inositol

C13576

1D-myo-inositol 1-monophosphate

C13573

1D-myo-inositol 3-monophosphate

C8321

geranyl diphosphate

C9304

trans,octacis-decaprenyl phosphate

C10870

torulene

C10874

apo-4'-lycopenal

C8144

echinenone

C8170

9,9'-di-cis-ζ-carotene

C8168

9,15,9'-tri-cis-ζ-carotene

C10862

15-cis-phytoene

C8158

β-carotene

C10940

all-trans-3,4-didehydrolycopene

C10876

prolycopene

C10900

all-trans-lycopene

C10856

4'-apo-β-carotenal

C11012

phytyl diphosphate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C15301

all-trans-nonaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C5378

geranylgeranyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C4553

3-octaprenyl-4-hydroxybenzoate

C4545

3-nonaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C4549

3-heptaprenyl-4-hydroxybenzoate

C5639

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

C10224

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

C10220

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

C2258

phlorisovalerophenone

C2266

deoxycohumulone

C2261

4-prenylphlorisovalerophenone

C2269

deoxyhumulone

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C4086

1-(β-D ribofuranosyl)nicotinamide

C10688

maltotriose

C5718

selaginose

C10689

maltotetraose

C10692

maltoheptaose

C10691

maltohexaose

C10690

maltopentaose

C10693

sucrose

C6823

α,α-trehalose

C8835

β-D-fructofuranose

C2012

keto-D-fructose

C5458

keto-L-sorbose

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C9477

N-acetyl-α-D-muramoyl-L-alanine(1-)

C15288

N-acetylmuramate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C5286

N-acetyl-β-D-glucosamine

C13570

N-acetyl-β-D-mannosamine

C9494

D-glyceraldehyde

C2858

glycolaldehyde

C2109

α-D-galactopyranose

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C11625

1-O-acetyl-α-maltose

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C13226

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

C13222

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C973

D-ribulose-1,5-bisphosphate

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C6673

sucrose 6F-phosphate

C7780

UDP-α-D-glucose

C8422

CDP-α-D-glucose

C1939

dTDP-α-D-glucose

C10263

ADP-α-D-glucose

C7804

UDP-α-D-galactofuranose

C7822

UDP-N-acetyl-α-D-muramate

C7824

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

C7722

UDP-α-D-glucuronate

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C8666

UDP-α-D-galactose

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C8547

UDP-N-acetyl-α-D-mannosaminuronate

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C7444

UDP-N-acetyl-α-D-glucosamine

C1930

dTDP-β-L-rhamnose

C1896

dTDP-4-dehydro-β-L-rhamnose

C8423

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1009

GDP-α-D-mannose

C1043

GDP-4-dehydro-α-D-rhamnose

C7189

GDP-β-L-fucose

C5615

D-glyceraldehyde 3-phosphate

C8811

α-D-glucopyranose 1-phosphate

C10356

4-phospho-D-erythronate

C10342

D-sedoheptulose 1,7-bisphosphate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10338

5-phospho-α-D-ribose 1-diphosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2989

β-D-fructofuranose 6-phosphate

C2125

α-D-glucose 6-phosphate

C2123

β-D-glucose 6-phosphate

C8704

D-xylulose 5-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C10604

D-ribulose 5-phosphate

C6715

aldehydo-D-ribose 5-phosphate

C6709

β-D-ribose 5-phosphate

C6711

α-D-ribose 5-phosphate

C2057

α-D-ribose-1-phosphate

C8815

α-D-galactose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2040

diacetyl

C2028

acetone

C6090

methylglyoxal

C3483

formaldehyde

C3500

acetaldehyde

C2300

precorrin-5

C2308

precorrin-6A

C2323

precorrin-7

C2317

precorrin-6B

C2320

precorrin-4

C2314

precorrin-3B

C2302

precorrin-3A

C2305

precorrin-1

C2311

precorrin-2

C2297

precorrin-8x

C1705

sirohydrochlorin

C2001

hydantoin

C4012

5,6-dihydrouracil

C7801

5,6-dihydrothymine

C8707

cytosine

C8770

dUMP

C8744

dTMP

C8720

dTDP

C8764

dTTP

C8752

dUDP

C8739

uracil

C8772

dCTP

C8724

dUTP

C8760

UTP

C8761

CTP

C8714

UDP

C8732

CDP

C8755

dCMP

C8733

dCDP

C6945

5-fluorouracil

C2241

UMP

C2245

CMP

C2702

cytidine

C2706

uridine

C2523

2'-deoxycytidine

C2527

2'-deoxyuridine

C10601

thymine

C7785

hypoxanthine

C9454

adenine

C7649

isoguanine

C9540

preQ1

C15094

xanthosine

C15085

guanosine

C15091

inosine

C15088

adenosine

C7813

2'-deoxyadenosine

C7755

2'-deoxyinosine

C7759

ITP

C7745

GTP

C7844

ATP

C7817

IDP

C7795

GDP

C7757

ADP

C7811

XMP

C7827

GMP

C7741

IMP

C7809

AMP

C7749

dITP

C7751

dGTP

C7783

dATP

C7747

dIDP

C7807

dGDP

C7823

dADP

C7840

dGMP

C7743

dAMP

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C15044

reduced riboflavin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12668

molybdopterin adenine dinucleotide

C12702

cyclic pyranopterin phosphate

C12664

7,8-dihydroneopterin

C12696

7,8-dihydromonapterin

C12728

6-(hydroxymethyl)-7,8-dihydropterin

C12730

7,8-dihydroneopterin 3'-triphosphate

C10609

7,8-dihydropteroate

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C10267

pppGpp

C10266

ppGpp

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C5552

5'-deoxyadenosine

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C7652

cyclic-AMP

C10288

adenylo-succinate

C9773

5-fluorocytosine

C14491

(R)-NADPHX

C14494

(S)-NADPHX

C1817

cyclic di-3',5'-guanylate

C10284

2-hydroxy-dATP

C10280

5-hydroxy-CMP

C10290

5-hydroxy-CTP

C4243

β-nicotinamide D-ribonucleotide

C9444

2-sulfanyl-N6-dimethylallyladenosine37 in tRNA

C9443

2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA