an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

selenodiglutathione

hydrogen selenide

α-D-glucosamine 1-phosphate

(R)-4'-phosphopantothenate

N⁵-carboxyaminoimidazole ribonucleotide

glutathione disulfide

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

2-(α-hydroxyethyl)thiamine diphosphate

1,4-dihydroxy-2-naphthoate

ADP-D-glycero-β-D-manno-heptose

ADP-L-glycero-β-D-manno-heptose

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

5-guanidino-2-oxopentanoate

2,5-dioxopentanoate

hydroxypyruvate

tartronate semialdehyde

thiamine phosphate

thiamine diphosphate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

L-gulono-1,4-lactone

ethanolamine

1,4-dihydroxy-2-naphthoyl-CoA

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

L-arginino-succinate

canavaninosuccinate

L-canavanine

prephenate

4-fumaryl-acetoacetate

(2-hydroxyphenyl)acetate

homogentisate

4-maleyl-acetoacetate

1-deoxy-L-glycero-tetrulose 4-phosphate

shikimate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(R)-pantothenate

quinolinate

5-oxo-L-proline

4-hydroxy-2-nonenal

O-acetyl-L-serine

α-ribazole

5,6-dimethylbenzimidazole

α-ribazole 5'-phosphate

(L-threonylcarbamoyl)adenylate

preuroporphyrinogen

(R)-4'-phosphopantothenoyl-L-cysteine

lipid IV_A

(S)-2-amino-6-oxohexanoate

3-dehydroshikimate

3-deoxy-D-manno-octulosonate 8-phosphate

(S)-4-amino-5-oxopentanoate

(S)-4-hydroxy-2-oxopentanoate

glycolate

chloramphenicol

N-(5-phosphoribosyl)-anthranilate

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

histidinal

histidinol

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

5-amino-6-(D-ribitylamino)uracil

2-hydroxy-5-carboxymethylmuconate semialdehyde

5-carboxymethyl-2-hydroxymuconate

2-amino-3-carboxymuconate-6-semialdehyde

anthranilate

3-hydroxyanthranilate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

2-dehydropantoate

2,6-dioxo-6-phenylhexa-3-enoate

2-oxopent-4-enoate

3-amino-1-hydroxyacetone 1-phosphate

5-phospho-β-D-ribosylamine

dihydroxyacetone

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

4-phosphooxy-L-threonine

adenosine 3',5'-bisphosphate

2-maleylacetate

aminoacetone

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

N-acetyl-β-D-mannosaminuronyl-(1→4)-N-acetyl-α-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol

adenosine 5'-phosphosulfate

4'-phosphopantetheine

orotidine 5'-phosphate

3-deoxy-α-D-manno-2-octulosonate

citrate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(S)-2-acetolactate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-2-aceto-2-hydroxybutanoate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

5-aminolevulinate

porphobilinogen

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

4-methyl-2-oxopentanoate

(S)-dihydroorotate

O-ureido-L-homoserine

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

urea

DNA without lesion

oxaloacetate

nicotinate adenine dinucleotide

3-(O-geranylgeranyl)-sn-glycerol 1-phosphate

N¹-(5-phospho-β-D-ribosyl)glycinamide

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

carbamoyl phosphate

carboxyphosphate

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-dehydroquinate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2-C-methyl-D-erythritol 4-phosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

N-Formyl-L-kynurenine

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

coproporphyrinogen III

lipid A disaccharide (E. coli)

lipid X

glycerone phosphate

(S)-mandelate

(R)-mandelate

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

5-methylsalicylate

4-methylsalicylate

N-acetyl-L-glutamate 5-semialdehyde

N-acetylglutamyl-phosphate

31-O-desmethylFK-506

FK-506

isochorismate

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

2-succinylbenzoate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

xanthine

D-gluconate 6-phosphate

5-androstene-3,17-dione

5-α-androstan-3β,17β-diol

pregn-5-ene-3,20-dione

pregn-5-ene-3,20-dione-17-ol

7,8-diaminopelargonate

dethiobiotin

pimeloyl-CoA

8-amino-7-oxononanoate

carbonic acid

squalene

hop-22(29)-ene

isopentenyl diphosphate

prenyl diphosphate

3-phosphooxypyruvate

hydrogen peroxide

acetoacetate

4-imidazolone-5-propanoate

urocanate

CO₂

phosphoenolpyruvate

H₂O

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

picolinate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

(3E)-2-oxopent-3-enoate

1,2-dihydro-β-NADP

enol-phenylpyruvate

4-oxoglutaramate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

(2E)-2-hydroxypenta-2,4-dienoate

ammonia

glutathioselenol

5-amino-6-(5-phospho-D-ribitylamino)uracil

N-succinyl-L,L-2,6-diaminopimelate

S-ribosyl-L-homocysteine

autoinducer 2

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

chloramphenicol 3-acetate

FAD

FMNH₂

FMN

caldariellaquinol

3-demethylubiquinol-8

ubiquinol-8

menaquinol-6

menaquinol-7

menaquinol-8

demethylmenaquinol-6

demethylmenaquinol-7

demethylmenaquinol-8

caldariellaquinone

NADH

NADPH

NAD⁺

NADP⁺

(R)-NADHX

(S)-NADHX

hydroxyl radical

superoxide

(2E,6E)-farnesyl diphosphate

pristanate

N-acetyl-β-neuraminate

selenite

OH^-

sulfate

thiosulfate

selenide

selenate

sulfite

nitrite

hydrogencarbonate

hydrogensulfite

bromide

chloride

phosphate

triphosphate

diphosphate

Fe³⁺

H⁺

ammonium

Mg²⁺

Fe²⁺

S-(hydroxymethyl)glutathione

thiocyanate

methanethiol

glutathione

S-sulfanylglutathione

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

L-cysteate

3-sulfopyruvate

(2R)-3-sulfolactate

(2R)-phospho-3-sulfolactate

(R)-S-lactoylglutathione

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

4-hydroxybenzoate

urate

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

(+)-taxifolin

(+)-dihydrokaempferol

(2R,3S,4S)-leucocyanidin

(2R,3S,4S)-leucopelargonidin

2,3-dihydroxybenzoate

protocatechuate

catechol

4-chlorocatechol

4-methylcatechol

tyramine

salicylate

benzoate

4-aminobenzoate

4-chlorosalicylate

5-chlorosalicylate

preQ₀

hydrogen cyanide

coenzyme A

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

MoO₂-molybdopterin cofactor

cytidylyl molybdenum cofactor

nicotinamide

nicotinate

riboflavin

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

cholest-4-en-3-one

progesterone

17-β-hydroxy-5-α-androstan-3-one

campesterol

campest-4-en-3β-ol

androst-4-ene-3,17-dione

cholesterol

cholest-5-en-3-one

17-α-hydroxyprogesterone

phenylacetate

(E)-glutaconyl-CoA

(2S)-ethylmalonyl-CoA

(2R)-ethylmalonyl-CoA

4-hydroxybenzoyl-CoA

3'-dephospho-CoA

4-hydroxybutanoyl-CoA

3-methylglutaconyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

(2E,4E)-tetradeca-2,4-dienoyl-CoA

(3E)-tetradec-3-enoyl-CoA

2-trans, 4-trans-undecadienoyl-CoA

2-trans, 4-cis-undecadienoyl-CoA

(3E)-undec-3-enoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

acetyl-CoA

malonyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

18-hydroxylinoleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(Z)-15-tetracosenoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

pristanoyl-CoA

cis-vaccenoyl-CoA

myristoyl-CoA

palmitoleoyl-CoA

stearoyl-CoA

palmitoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E)-dec-2-enoyl-CoA

trans-Δ², cis-Δ⁴-decadienoyl-CoA

D-glucono-1,5-lactone

cis-dienelactone

trans-dienelactone

6-aminopenicillanate

penicillin G

isopenicillin N

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

4-hydroxybutanoate

18-hydroxyoleate

18-hydroxystearate

16-hydroxypalmitate

7-hydroxylaurate

(R)-lactate

(S)-2-hydroxyglutarate

oleate

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

α-linolenate

linoleate

(15Z)-tetracosenoate

phytenate

stearate

palmitate

decanoate

octanoate

laurate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

acetate

(R)-pantoate

orotate

5-chloro-5-deoxy-D-ribonate

D-gluconate

(S)-1-pyrroline-5-carboxylate

L-2-aminoadipate

carbamate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-cysteine

L-selenocysteine

L,L-diaminopimelate

L-tryptophan

L-histidine

L-isoleucine

L-valine

L-leucine

L-phenylalanine

L-lysine

L-aspartyl-4-phosphate

L-aspartate

L-asparagine

L-threonine

L-arginine

L-alanine

L-tyrosine

L-ornithine

L-proline

L-serine

L-glutamine

L-glutamate

L-isoglutamine

L-methionine

N-carbamoyl-L-aspartate

N-formyl-L-glutamate

formyl-L-isoglutamine

N-formimino-L-glutamate

N-acetyl-L-citrulline

N-acetyl-L-ornithine

glycine

L-citrulline

1-aminocyclopropane-1-carboxylate

O-phospho-L-homoserine

L-glutamate-5-semialdehyde

L-canaline

L-homoserine

L-aspartate 4-semialdehyde

S-adenosyl-L-methionine

S-adenosyl-L-homocysteine

L-homocysteine

meso-diaminopimelate

L-allo-threonine

β-alanine

D-glutamate

D-aspartate

D-arginine

cis-4-hydroxy-D-proline

D-alanine

iminoarginine

L-saccharopine

L-2-amino-3-oxobutanoate

N-acetyl-L-glutamate

3-phospho-L-serine

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

O-acetyl-L-homoserine

3-(4-hydroxyphenyl)pyruvate

3-phenyl-2-oxopropanoate

pyruvate

glyoxylate

5-chloro-4-hydroxy-2-oxopentanoate

2-oxobutanoate

2-oxoglutarate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(3E)-2-oxohex-3-enedioate

chorismate

fumarate

succinate

(S)-malate

α,ω-9Z-octadecenedioate

3-carboxy-cis,cis-muconate

cis-aconitate

D-threo-isocitrate

3-oxoadipate

formate

sn-glycero-3-phosphoethanolamine

glycerophosphoglycerol

glycerophosphoserine

myo-inositol

scyllo-inosose

1-keto-D-chiro-inositol

1D-myo-inositol 3-monophosphate

1-octanol

glycerol

L-iditol

D-sorbitol

butan-1-ol

ethanol

phytol

trans,octacis-decaprenyl phosphate

3-oxo-24-ethyl-cholest-5-ene

3-oxo-24-ethyl-cholest-4-ene

geranyl diphosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-heptaprenyl diphosphate

all-trans-octaprenyl diphosphate

geranylgeranyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

2,3-bis-O-(geranylgeranyl)-sn-glycerol 1-phosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-oleoyl-sn-glycerol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

1,2-dimyristoyl-sn-glycerol 3-phosphate

dioleoyl phosphatidate

α-Kdo-(2→6)-lipid IV_A

4-amino-2-(methanethioyl)-5-oxo-3-sulfanylpyrrolidine-2-carboxylate

(5E)-3-amino-4-sulfanyl-5-(sulfanylmethylidene)pyrrolidin-2-one

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

1-(β-D ribofuranosyl)nicotinamide

maltotriose

maltotetraose

selaginose

maltoheptaose

maltohexaose

maltopentaose

4-O-β-D-mannopyranosyl-N-acetyl-D-glucosamine

α,α-trehalose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

CMP-N-acetyl-β-neuraminate

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

CDP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-β-L-fucose

CDP-4-dehydro-6-deoxy-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-β-L-threo-pentapyranos-4-ulose

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-mannosaminuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

dTDP-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-4-dehydro-β-L-rhamnose

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

4-phospho-D-erythronate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

5-phospho-α-D-ribose 1-diphosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

5-fluoro-5-deoxy-D-ribose 1-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan dimer (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparatyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

α,α-trehalose 6-phosphate

D-xylulose

α-D-ribofuranose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-β-D-glucosamine

N-acetyl-α-D-mannosamine

D-glyceraldehyde

α-D-glucopyranose

β-D-glucopyranose

β-D-galactopyranose

α-D-galactopyranose

L-glyceraldehyde

glycolaldehyde

keto-D-fructose

β-D-fructofuranose

keto-L-sorbose

L-gulonate

diacetyl

methylglyoxal

phytenal

butan-1-al

formaldehyde

acetaldehyde

1-octanal

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

uridine 3'-monophosphate

cytidine-3'-monophosphate

dUTP

dCTP

UTP

uracil

dTTP

dCMP

dCDP

CDP

dUDP

CTP

UDP

dTDP

dUMP

dTMP

CMP

UMP

cytidine

uridine

thymidine

2'-deoxyuridine

2'-deoxycytidine

guanine

adenine

hypoxanthine

isoguanine

preQ₁

xanthosine

guanosine

inosine

adenosine

2'-deoxyinosine

2'-deoxyadenosine

2'-deoxyguanosine

ITP

GTP

ATP

IMP

XMP

GMP

AMP

IDP

ADP

GDP

dITP

dATP

dGTP

dIDP

dADP

dGDP

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

precorrin-2

precorrin-1

sirohydrochlorin

adenosylcobalamin

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

8-oxo-GTP

8-oxo-GMP

pppGpp

ppGpp

adenylo-succinate

adenosine 3'-monophosphate

guanosine 3'-monophosphate

8-oxo-dGTP

8-oxo-dGMP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

cyclic-AMP

cyclic-GMP

(R)-NADPHX

(S)-NADPHX

cyclic di-3',5'-guanylate

5-hydroxy-CTP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

5'-deoxy-5'-fluoroadenosine

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

ethylphosphate

carboxyphosphinopyruvate

3-(hydroxyphosphinoyl)pyruvate

1-carboxyvinyl carboxyphosphonate

Mg-protoporphyrin

adenosylcobalamin 5'-phosphate

adenosyl-cobinamide phosphate

adenosylcobinamide-GDP

protoheme

protoporphyrin IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

siroheme

hydrogen sulfide

oxygen

2-iminosuccinate

2-iminobutanoate

2-iminopropanoate

2-chloroacetate

sn-glycerol 3-phosphate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

agmatine

dehydrospermidine

spermidine

cadaverine

putrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

bromochloromethane

3-chloro-cis,cis-muconate