an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

glutathioselenol

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

H₂O

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

3-methyl-2-oxobutanoate

(S)-3-methyl-2-oxopentanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

citrate

oxaloacetate

L-selenocystathionine

CO₂

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

succinate semialdehyde

4-aminobutanoate

3-oxopropanoate

phosphoenolpyruvate

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

α-D-glucosamine 1-phosphate

carboxyphosphate

carbamoyl phosphate

2-C-methyl-D-erythritol 4-phosphate

oxalosuccinate

(S)-dihydroorotate

formate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

1-deoxy-L-glycero-tetrulose 4-phosphate

4-maleyl-acetoacetate

homogentisate

urea

4-methyl-2-oxopentanoate

ethanolamine

betaine aldehyde

acetoacetate

1,4-dihydroxy-2-naphthoyl-CoA

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

5-enolpyruvoyl-shikimate 3-phosphate

4-carboxy-2-hydroxymuconate-6-semialdehyde

6-chloro-2-hydroxy-4-carboxymuconate-6-semialdehyde

shikimate 3-phosphate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-phosphooxypyruvate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

glycerone phosphate

5-dehydro-D-gluconate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

L-canavanine

canavaninosuccinate

L-arginino-succinate

L-histidinol phosphate

imidazole acetol-phosphate

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

3-deoxy-D-arabino-heptulosonate 7-phosphate

γ-L-glutamyl 5-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(2,3-dihydroxybenzoyl)adenylate

(L-aspartyl)adenylate

S-formylglutathione

3-dehydroshikimate

shikimate

porphobilinogen

O-ureido-L-homoserine

5-dehydro-4-deoxy-D-glucarate

2,5-dioxopentanoate

hydrogen peroxide

5-methylsalicylate

4-methylsalicylate

nicotinate adenine dinucleotide

2-dehydropantoate

(R)-4'-phosphopantothenate

(R)-pantothenate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

isopentenyl diphosphate

anthranilate

N-(5-phosphoribosyl)-anthranilate

N-acetylglutamyl-phosphate

N-acetyl-L-glutamate 5-semialdehyde

β-nicotinate D-ribonucleotide

(4,5-dihydro-5-oxofuran-2-yl)-acetate

glycolate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

3-amino-1-hydroxyacetone 1-phosphate

oxalate

4-methyl-3-oxoadipate

dimethylthiophosphate

diethylphosphate

diethylthiophosphate

4-fumaryl-acetoacetate

4,5-dihydroxyphthalate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

β-D-ribosylnicotinate

2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

(2E,4Z)-2-hydroxymuconate

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

O-acetyl-L-serine

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

4'-phosphopantetheine

selenophosphate

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

4-hydroxy-2-nonenal

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

4-amino-4-deoxy-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

(25S)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

(2Z,4E)-2-amino-6-oxohexa-2,4-dienoate

2-amino-3-carboxymuconate-6-semialdehyde

DNA without lesion

coenzyme F₃₉₀-A

hydrogenobyrinate a,c-diamide

L-gulono-1,4-lactone

5-carboxymethyl-2-hydroxymuconate

(R)-4-phosphopantoate

3-deoxy-D-manno-octulosonate 8-phosphate

N-Formyl-L-kynurenine

3-hydroxyanthranilate

7-carboxy-7-deazaguanine

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

3-mercaptopyruvate

3-dehydroquinate

5-amino-6-(5-phospho-D-ribosylamino)uracil

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-aminoacetaldehyde

lipid A disaccharide (E. coli)

lipid X

phosphonoacetate

formamide

lipid IV_A

3-deoxy-α-D-manno-2-octulosonate

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

(1R,2S)-1,2-dihydronaphthalene-1,2-diol

coproporphyrinogen III

(2-hydroxyphenyl)acetate

histidinol

carbonic acid

carbon monoxide

2-protocatechuoylphloroglucinolcarboxylate

5-amino-6-(D-ribitylamino)uracil

5-oxo-L-proline

hydroxypyruvate

2-maleylacetate

pimeloyl-CoA

pimelate

(S)-2-amino-6-oxohexanoate

3-methyl-2-butenal

orotidine 5'-phosphate

creatinine

2-oxoadipate

tartronate semialdehyde

2-hydroxy-5-carboxymethylmuconate semialdehyde

2-ketocyclohexane-1-carbonyl-CoA

2-hydroxy-cyclohexane-1-carbonyl-CoA

N-succinyl-L,L-2,6-diaminopimelate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

3-ureidopropanoate

ε-caprolactone

cyclohexanone

(S)-4-hydroxy-2-oxopentanoate

2-oxopent-4-enoate

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

2-pyrone-4,6-dicarboxylate

prephenate

2-phosphoglycolate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

hydrogenobyrinate

histidinal

(2R,3S)-3-methylmalate

citraconate

(R)-mandelate

(S)-mandelate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

propanoyl phosphate

preuroporphyrinogen

glutathione disulfide

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-iminoacetate

D-erythro-imidazole-glycerol-phosphate

cis-3,4-dehydroadipyl-CoA semialdehyde

2,3-epoxy-2,3-dihydrobenzoyl-CoA

α-ribazole 5'-phosphate

α-ribazole

5,6-dimethylbenzimidazole

(2E)-2-methyl-4,6-dioxohept-2-enedioate

3-methylgentisate

(2E)-3-methyl-4,6-dioxohept-2-enedioate

4-methylgentisate

3-maleylpyruvate

dimethylmaleate

(R)-3-methylitaconate

thiamine diphosphate

thiamine phosphate

xanthine

(lipoyl)adenylate

(L-seryl)adenylate

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

acetyl phosphate

(S)-5-amino-3-oxohexanoate

(4-hydroxyphenyl)acetate

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

N⁵-carboxyaminoimidazole ribonucleotide

4-amino-4-deoxychorismate

S-ribosyl-L-homocysteine

6-hydroxynicotinate

6-oxo-1,4,5,6-tetrahydronicotinate

(S)-2-formylglutarate

quinolinate

methylsalicylate

salicyl alcohol

(1R,6S)-dihydroxycyclohexa-2,4-diene-1,4-dicarboxylate

terephthalate

4-carboxybenzyl alcohol

4-carboxybenzaldehyde

D-gluconate 6-phosphate

autoinducer 2

mercuriphenyl acetate

N-acetyl-D-muramate 6-phosphate

(4S)-4-hydroxy-2-oxoheptanedioate

(R)-1-amino-2-propanol O-2-phosphate

dialurate

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

UDP-4-deoxy-4-formamido-β-L-arabinopyranose

4-deoxy-4-formamido-α-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate

5-(hydroxymethyl)-2-methylphenol

3-hydroxy-4-methylbenzaldehyde

trans-2,3-dehydroadipyl-coA

cis-3,4-dehydroadipyl-CoA

5-amino-6-(5-phospho-D-ribitylamino)uracil

3-hydroxypropanoate

vanillin

2-hydroxy-4-carboxymuconate semialdehyde hemiacetal

(2Z,4E)-2-aminomuconate

8-amino-7-oxononanoate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

naphthalene-1,2-diol

trans-O-hydroxybenzylidenepyruvate

(S)-ureidoglycolate

hydrogen selenide

selenodiglutathione

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

picolinate

(2E)-2-hydroxypenta-2,4-dienoate

4-oxalocrotonate

(3E)-2-oxopent-3-enoate

ammonia

bisorganyltrisulfane

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

coenzyme A

(R)-lipoate

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

tetrahydromethanopterin

5,10-methylene-tetrahydromethanopterin

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

oxidized coenzyme F₄₂₀-2

isoguanine

ADP

ATP

GMP

IMP

GDP

adenylo-succinate

GTP

dGTP

dGDP

dITP

dIDP

ITP

IDP

dATP

dADP

AMP

XMP

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

5'-deoxyadenosine

ppGpp

pppGpp

2'-deoxyinosine

2'-deoxyadenosine

8-oxo-dGMP

8-oxo-dGTP

hypoxanthine

cyclic-GMP

2'-deoxyguanosine

8-oxo-GMP

8-oxo-GTP

adenine

uracil

thymine

preQ₁

adenosine

inosine

guanosine

xanthosine

cytidine

uridine

thymidine

2'-deoxycytidine

2'-deoxyuridine

NADP⁺

NAD⁺

NADPH

NADH

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-rhamnose

5,6-dihydrothymine

5,6-dihydrouracil

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-β-L-rhamnose

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

dTDP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-β-L-threo-pentapyranos-4-ulose

UDP-4-amino-4-deoxy-β-L-arabinopyranose

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

CMP-N-acetyl-β-neuraminate

dUTP

dCTP

dTTP

dUMP

dCMP

dTMP

dUDP

dCDP

dTDP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

CDP

UDP

UMP

CMP

CTP

UTP

2-hydroxy-dATP

5-hydroxy-CTP

cyclic di-3',5'-guanylate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

cholest-dien-3-one

cholest-4-en-3-one

3,22-dioxochol-4-en-24-oyl-CoA

androsta-1,4-diene-3,17-dione

androst-4-ene-3,17-dione

ethene

(indol-3-yl)acetate

phenylacetate

methyl (indol-3-yl)acetate

(+)-7-epi-jasmonate

acetyl-CoA

2-methylacetoacetyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

malonyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

succinyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

oxalyl-CoA

formyl-CoA

4-hydroxybenzoyl-CoA

trans-feruloyl-CoA

3'-dephospho-CoA

(25R)-3α,7α-dihydroxy-5β-cholestanoyl-CoA

(25S)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(25R)-3α,7α,12α-trihydroxy-5β-cholestanoyl-CoA

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

3-methylglutaconyl-CoA

anthraniloyl-CoA

gentisyl-CoA

salicyl-CoA

(3S)-citryl-CoA

phenylacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

(S)-3-aminobutanoyl-CoA

isobutanoyl-CoA

benzoyl-CoA

acryloyl-CoA

3-hydroxypropanoyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

16-hydroxypalmitoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

octanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

decanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

pentanoyl-CoA

pristanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

trans-dienelactone

cis-dienelactone

D-glucono-1,5-lactone

all-trans-retinyl palmitate

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfocatechol

3-sulfopyruvate

L-cysteate

taurine

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

methanethiol

thiocyanate

S-sulfanylglutathione

3-sulfino-L-alanine

ferrichrome

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

(2E,6E)-farnesyl diphosphate

pristanate

superoxide

hydroxyl radical

FMN

FMNH₂

FADH₂

FAD

caldariellaquinol

3-demethylubiquinol-8

menaquinol-8

ubiquinol-8

demethylmenaquinol-8

caldariellaquinone

(S)-NADHX

(R)-NADHX

glycine betaine

sulfate

selenate

hydrogencarbonate

sulfite

selenide

thiosulfate

OH^-

nitrate

molybdate

selenite

hydrogensulfite

chloride

phosphonate

phosphate

diphosphate

triphosphate

Fe³⁺

Co²⁺

Fe²⁺

Hg²⁺

Mo²⁺

ammonium

H⁺

K⁺

5-chloro-4-hydroxy-2-oxopentanoate

5-chloro-5-deoxy-D-ribonate

2-chloroacetate

3-chloro-cis,cis-muconate

4-chlorocatechol

4-chlorosalicylate

5-chlorosalicylate

N-acetyl-β-neuraminate

riboflavin

nicotinate

nicotinamide

menadione

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

all-trans-retinol

adenosylcobalamin

cob(I)alamin

4-nitrophenol

paraoxon

parathion

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

2-nitrobenzoate

spermidine

putrescine

cadaverine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

D-gluconate

L-gulonate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

4'-α-L-Ara4N-α-Kdo-(2→4)-α-Kdo-(2→6)-[P4'-α-L-ara4N]-lipid A

α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

glycerol

β-D-fructofuranose

β-L-rhamnopyranose

α-L-rhamnopyranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-glucosamine

N-acetyl-α-D-mannosamine

keto-D-fructose

glycolaldehyde

α-D-galactopyranose

α-L-arabinopyranose

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

D-xylulose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-mannose 1-phosphate

α-D-glucopyranose 1-phosphate

α-D-galactose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

preQ₀

hydrogen cyanide

(indole-3-yl)acetonitrile

acrylonitrile

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

(R)-citramalate

(S)-citramalate

(S)-ureidoglycine

(2R)-2,3-dihydroxy-3-methylbutanoate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

hydrogen sulfide

oxygen

Hg⁰

protoporphyrin IX

coproporphyrinogen I

uroporphyrinogen-I

uroporphyrinogen-III

protoporphyrinogen IX

hemin

protoheme

cob(II)yrinate a,c-diamide

cobyrinate

cob(II)yrinate c-monoamide

adenosylcobalamin 5'-phosphate

adenosylcobinamide-GDP

adenosyl-cobinamide phosphate

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

adenosylcobyrate

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

L-homocysteine

4-methylphenol

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysine

N-acetyl-D-glucosaminyl-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

hypoglycin B

carbamate

L-kynurenine

L-2-aminoadipate

L-α-amino-ε-keto-pimelate

seleno-L-homocysteine

L-aspartyl-4-phosphate

D-nopaline

L-saccharopine

O-acetyl-L-homoserine

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

sarcosine

3-phospho-L-serine

N-carbamoylglycine

N-acetyl-L-ornithine

N-acetyl-L-citrulline

N-acetyl-L-glutamate

N-acetyl-L-methionine

N-carbamoyl-L-aspartate

L-cysteine

L-methionine

L-threonine

L-glutamate

L-aspartate

L-phenylalanine

L-cystathionine

L-alanine

L-glutamine

L-leucine

L-isoleucine

L-valine

L-serine

L-tyrosine

L-ornithine

L-proline

L-tryptophan

L-arginine

L-asparagine

L-histidine

L-lysine

L,L-diaminopimelate

D-alanine

D-glutamate

glycine

creatine

β-alanine

(S)-3-amino-2-methylpropanoate

(R)-3-amino-2-methylpropanoate

L-citrulline

L-aspartate 4-semialdehyde

L-homoserine

O-phospho-L-homoserine

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

S-adenosyl-L-methionine

hypoglycin A

L-canaline

O-succinyl-L-homoserine

meso-diaminopimelate

palmitate

stearate

octanoate

laurate

7-hydroxylaurate

decanoate

pentanoate

butanoate

oleate

α-linolenate

linoleate

dinor-12-oxo-phytodienoate

8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

(15Z)-tetracosenoate

phytenate

4-hydroxybutanoate

gentisate

(R)-3-hydroxybutanoate

(2R,3S)-2-methylisocitrate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(R)-lactate

propanoate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-oxoglutarate

pyruvate

2-oxobutanoate

glyoxylate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

3-carboxy-cis,cis-muconate

cis-aconitate

(2S,3S)-2-methylcitrate

cis-2-methylaconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

(3E)-2-oxohex-3-enedioate

D-galactarate

D-glucarate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

protocatechuate

5-chloroprotocatechuate

2,3-dihydroxybenzoate

salicylate

vanillate

4-aminobenzoate

3-hydroxy-5-methyl-benzoate

3-hydroxy-4-methyl-benzoate

4-methylbenzoate

acetate

allantoate

orotate

(R)-pantoate

(S)-1-pyrroline-5-carboxylate

acetamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

(S)-(+)-allantoin

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

di-trans,octa-cis-undecaprenyl phosphate

trans,octacis-decaprenyl phosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

torulene

apo-4'-lycopenal

all-trans-3,4-didehydrolycopene

4'-apo-β-carotenal

salicylaldehyde

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

enterobactin

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

4-methylcatechol

catechol

3-methylcatechol

3,4-dihydroxyphenylacetate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

ethanol

methanol

methylglyoxal

diacetyl

acetaldehyde

formaldehyde

4-hydroxybenzoate

naphthalene

benzene

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

2-hydroxylaminobenzoate

toluene

menadiol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

4-aminophenol

phenol

3,5-xylenol

3-(hydroxymethyl)-5-methylphenol

3-hydroxy-5-methylbenzaldehyde

2,5-xylenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

amino-parathion

ferulate

quercetin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydromonapterin

7,8-dihydroneopterin

7,8-dihydropteroate

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

hydantoin

precorrin-3A

precorrin-3B

precorrin-4

precorrin-5

precorrin-6A

precorrin-2

precorrin-1

precorrin-6B

precorrin-8x

precorrin-7

2-hydroxychromene-2-carboxylate