an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

2-C-methyl-D-erythritol 4-phosphate

CO₂

thiamine diphosphate

2-(α-hydroxyethyl)thiamine diphosphate

H₂O

phosphoenolpyruvate

anthranilate

4-methyl-2-oxopentanoate

(S)-3-methyl-2-oxopentanoate

3-methyl-2-oxobutanoate

carbamoyl phosphate

(S)-dihydroorotate

oxaloacetate

α-D-glucosamine 1-phosphate

5-phospho-β-D-ribosylamine

shikimate 3-phosphate

shikimate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

(R)-4'-phosphopantothenoyl-L-cysteine

(R)-4'-phosphopantothenate

4'-phosphopantetheine

N-acetyl-L-glutamate 5-semialdehyde

L-canavanine

canavaninosuccinate

L-arginino-succinate

(R)-2,3-dihydroxy-3-methylpentanoate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

prenyl diphosphate

isopentenyl diphosphate

prephenate

L-histidinol phosphate

imidazole acetol-phosphate

citrate

(indol-3 yl)acetyl-CoA

(indol-3-yl)pyruvate

succinate semialdehyde

N-acetylglutamyl-phosphate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

nicotinate adenine dinucleotide

oxalosuccinate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

γ-L-glutamyl 5-phosphate

5-aminolevulinate

L-selenocystathionine

3-mercaptopyruvate

2-dehydro-3-deoxy-D-gluconate

urocanate

4-imidazolone-5-propanoate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

3-oxopropanoate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

hydrogenobyrinate

4-maleyl-acetoacetate

homogentisate

acetoacetate

4-aminobutanoate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

quinolinate

β-nicotinate D-ribonucleotide

hydrogen peroxide

glycolate

3-hydroxypropanoate

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

S-ribosyl-L-homocysteine

5-(methylsulfanyl)-α-D-ribose

S-methyl-5'-thioadenosine

3-deoxy-D-manno-octulosonate 8-phosphate

glycerone phosphate

3-dehydroshikimate

3-dehydroquinate

carboxyphosphate

ethanolamine

6-amino-2-oxohexanoate

coproporphyrinogen III

N¹-(5-phospho-β-D-ribosyl)glycinamide

α-ribazole 5'-phosphate

5,6-dimethylbenzimidazole

β-D-ribosylnicotinate

2-dehydropantoate

8-amino-7-oxononanoate

pimeloyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-phosphooxypyruvate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

hydrogenobyrinate a,c-diamide

DNA without lesion

N-dimethylethanolamine phosphate

N-methylethanolamine phosphate

phosphocholine

O-phosphoethanolamine

preuroporphyrinogen

porphobilinogen

4-hydroxy-2-nonenal

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(R)-mandelate

(S)-mandelate

4-amino-4-deoxychorismate

xanthine

3-amino-1-hydroxyacetone 1-phosphate

pseudouridine 5'-phosphate

2-phosphoglycolate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

isochorismate

(R)-pantothenate

N-acetyl-D-muramate 6-phosphate

carbon monoxide

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

orotidine 5'-phosphate

2-oxovalerate

3-ethylmalate

(2S)-2-isopropyl-3-oxosuccinate

N-(5-phosphoribosyl)-anthranilate

2-maleylacetate

3-deoxy-D-arabino-heptulosonate 7-phosphate

(2R,3S)-3-methylmalate

citraconate

N-(2,3-dihydroxybenzoyl)-L-serine trimer

N-(2,3-dihydroxybenzoyl)-L-serine

N-(2,3-dihydroxybenzoyl)-L-serine dimer

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-L,L-2,6-diaminopimelate

5-oxo-L-proline

O-ureido-L-homoserine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

D-erythro-imidazole-glycerol-phosphate

2-iminoacetate

ethylamine

N-ethylglycine

methylamine

5-enolpyruvoyl-shikimate 3-phosphate

D-glycero-β-D-manno-heptose 1-phosphate

D-glycero-β-D-manno-heptose 1,7-bisphosphate

S-formylglutathione

glutathione disulfide

(lipoyl)adenylate

hydroxylamine

ammonia

N²-succinylglutamate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

histidinol

histidinal

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-fumaryl-acetoacetate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

lipid A disaccharide (E. coli)

lipid X

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

methyl-1,4-benzoquinol

2-methyl-1,4-benzoquinone

D-gluconate 6-phosphate

lipid IV_A

tartronate semialdehyde

hydroxypyruvate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

carbonic acid

methylsalicylate

salicyl alcohol

formamide

3-hydroxyanthranilate

O-acetyl-L-serine

2-dehydro-3-deoxy-D-galactonate

N-Formyl-L-kynurenine

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

3-deoxy-α-D-manno-2-octulosonate

propanoyl phosphate

trans-O-hydroxybenzylidenepyruvate

2,5-dioxopentanoate

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

(S)-4-hydroxy-2-oxopentanoate

vanillin

4,4'-dihydroxy-3,3'-dimethoxystilbene

N-carbamoylputrescine

2-arylpropanoate

2-aryl-2-methylmalonate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

2'-(5''-triphospho-α-D-ribosyl)-3'-dephospho-CoA

4-pyridoxolactone

isoquinolin-2(1H)-one

isoquinoline

(4Z)-2-oxohept-4-enedioate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

2-aminoacetaldehyde

2-oxopent-4-enoate

(R)-1-amino-2-propanol O-2-phosphate

ectoine

(2S)-4-acetamido-2-aminobutanoate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

(S)-2-amino-6-oxohexanoate

3-ureidopropanoate

(R)-2-benzylsuccinate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

4-methyl-3-oxoadipate

4-methyl-3-oxoadipate-enol-lactone

ADP-L-glycero-β-D-manno-heptose

ADP-D-glycero-β-D-manno-heptose

(2S)-lactyl-2-diphospho-5'-guanosine

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

5-amino-6-(D-ribitylamino)uracil

coenzyme F₃₉₀-A

4-methylsalicylate

5-methylsalicylate

L-β-lysine

(2-hydroxyphenyl)acetate

1-deoxy-L-glycero-tetrulose 4-phosphate

thiamine phosphate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

protoanemonin

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

urea

(S)-ureidoglycolate

glutathioselenol

enol-phenylpyruvate

pyruvic oxime

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-formyl-3-hydroxy-2-methylpyridine-4-carboxylate

3-hydroxy-2-methylpyridine-4,5-dicarboxylate

3-hydroxy-2-methylpyridine-5-carboxylate

(2Z)-2-(acetamidomethylene)succinate

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

2-amino-3-carboxymuconate-6-semialdehyde

hydrogen selenide

selenodiglutathione

pseudouridine

autoinducer 2

4-oxoglutaramate

5-aminopentanoate

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

1-piperideine-2-carboxylate

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

D-mannonate

D-galactonate

D-altronate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

β-D-ribopyranose

α-D-galactopyranose

β-D-galactopyranose

β-D-glucopyranose

α-D-glucopyranose

α-L-arabinopyranose

β-L-rhamnopyranose

α-L-rhamnopyranose

D-glyceraldehyde

aldehydo-D-ribose

α-D-ribofuranose

β-D-ribofuranose

keto-D-fructose

β-D-fructofuranose

D-xylulose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-α-D-mannosamine

N-acetyl-β-D-glucosamine

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-neuraminate

4-deoxy-L-threo-hex-4-enopyranuronate

4-deoxy-L-erythro-hex-4-enopyranuronate

glycerol

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ADP-α-D-glucose

GDP-α-D-mannose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-glucose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

dTDP-4-dehydro-β-L-rhamnose

dTDP-α-D-glucose

dTDP-β-L-rhamnose

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-α-D-glucose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-α-D-glucuronate

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

CMP-3-deoxy-β-D-manno-octulosonate

CMP-N-acetyl-β-neuraminate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

α-D-glucopyranose 1-phosphate

α-D-mannose 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 6-phosphate

β-D-fructose 1,6-bisphosphate

D-tagatofuranose 1,6-bisphosphate

keto-L-tagatose 6-phosphate

D-tagatofuranose 6-phosphate

D-fructose 6-phosphate

α-D-glucose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-arabinofuranose 5-phosphate

D-glyceraldehyde 3-phosphate

α,α-trehalose 6-phosphate

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (E. faeciums)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine

4-(4-deoxy-α-D-galact-4-enuronosyl)-D-galacturonate

α,α-trehalose

maltotetraose

maltohexaose

maltoheptaose

maltotriose

maltopentaose

unsaturated gellan tetrasaccharide

β-D-Glcp-(1→4)-α-L-Rhap-(1→3)-D-Glcp

α-Kdo-(2→6)-lipid IV_A

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IV_A

aldehydo-D-galacturonate

salicylaldehyde

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

all-trans-retinyl palmitate

all-trans-retinol

trans,octacis-decaprenyl phosphate

(2E,6E)-farnesyl diphosphate

geranyl diphosphate

enterobactin

protocatechuate

4-chlorocatechol

4-methylcatechol

catechol

2,3-dihydroxybenzoate

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

ethanol

methanol

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

carbamate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-citrulline

L-leucine

L-isoleucine

L-valine

L-glutamate

L-glutamine

L-aspartate

L-phenylalanine

L-alanine

L-threonine

L-arginine

glycine

L-tryptophan

L-serine

L-proline

L-histidine

L-lysine

L-asparagine

L-tyrosine

L-methionine

L-cysteine

O-phospho-L-homoserine

L-homoserine

L-glutamate-5-semialdehyde

L-homocysteine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-ornithine

L-aspartate 4-semialdehyde

1-aminocyclopropane-1-carboxylate

hypoglycin A

O-succinyl-L-homoserine

L-canaline

3-sulfino-L-alanine

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

meso-diaminopimelate

seleno-L-homocysteine

L-aspartyl-4-phosphate

L-saccharopine

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N-carbamoylglycine

N-formyl-L-glutamate

formyl-L-isoglutamine

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

S-methyl-L-cysteine

L-threonine 3-O-phosphate

3-phospho-L-serine

L-cystathionine

L-2,4-diaminobutanoate

L,L-diaminopimelate

S-trans-1-propenyl-L-cysteine

S-allyl-L-cysteine

L-isoglutamine

D-glutamate

D-alanine

D-lysine

β-alanine

(R)-β-lysine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

salicylate

4-aminobenzoate

acetate

(R)-pantoate

orotate

5-chloro-5-deoxy-D-ribonate

allantoate

(S)-1-pyrroline-5-carboxylate

D-tagaturonate

pristanate

palmitate

stearate

decanoate

laurate

7-hydroxylaurate

octanoate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

phytenate

(15Z)-tetracosenoate

oleate

linoleate

α-linolenate

(1E,3E)-4-hydroxybuta-1,3-diene-1,2,4-tricarboxylate

(R)-lactate

(R)-glycerate

(R)-3-hydroxybutanoate

pyruvate

formate

propanoate

2-hydroxy-4-oxobutane-1,2,4-tricarboxylate

(1E)-4-oxobut-1-ene-1,2,4-tricarboxylate

2-oxoglutarate

glyoxylate

2-oxobutanoate

5-chloro-4-hydroxy-2-oxopentanoate

4-(methylsulfanyl)-2-oxobutanoate

(R)-4-hydroxy-4-methyl-2-oxoglutarate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

cis-aconitate

3-carboxy-cis,cis-muconate

(2R)-homocitrate

cis-homoaconitate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

(3E)-2-oxohex-3-enedioate

α,ω-9Z-octadecenedioate

fumarate

succinate

(S)-malate

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

(S)-(+)-allantoin

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

3-heptaprenyl-4-hydroxybenzoate

3-nonaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-hexaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-heptaprenyl diphosphate

all-trans-nonaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-hexaprenyl diphosphate

geranylgeranyl diphosphate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

methylglyoxal

acetaldehyde

formaldehyde

2,5-piperidinedione

menadione

caldariellaquinone

diacetyl

4-hydroxybenzoate

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

(R)-benzylsuccinyl-CoA

menadiol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

ubiquinol-8

5-chlorosalicylate

4-chlorosalicylate

4-methylphenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

2-hydroxychromene-2-carboxylate

adenine

guanine

AMP

GMP

XMP

IMP

ATP

GTP

ITP

ADP

GDP

dGDP

dADP

dATP

dGTP

dAMP

dGMP

hypoxanthine

guanosine

adenosine

inosine

xanthosine

2'-deoxyguanosine

tetrahydromethanopterin

(6R)-4a-hydroxy-tetrahydrobiopterin

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

(6R)-L-erythro-5,6,7,8-tetrahydrobiopterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydroneopterin 3'-triphosphate

molybdopterin adenine dinucleotide

molybdopterin

cyclic pyranopterin phosphate

7,8-dihydropteroate

5,10-methylene-tetrahydromethanopterin

7,8-dihydrofolate monoglutamate

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

guanylyl molybdenum cofactor

MoO₂-molybdopterin cofactor

FMNH₂

reduced riboflavin

FADH₂

FMN

riboflavin

FAD

6,7-dimethyl-8-(1-D-ribityl)lumazine

thymine

uracil

isoguanine

CTP

dUTP

dCTP

UTP

CDP

dCDP

UDP

dUDP

uridine 3'-monophosphate

uridine 2'3'-cyclic monophosphate

cytidine-3'-monophosphate

cytidine 2',3'-cyclic monophosphate

dTDP

dTMP

dUMP

dCMP

dTTP

5,6-dihydrothymine

5,6-dihydrouracil

CMP

UMP

uridine

cytidine

thymidine

2'-deoxyuridine

2'-deoxycytidine

hydantoin

adenosylcobalamin

cob(I)alamin

sirohydrochlorin

cobyrinate

precorrin-2

precorrin-1

precorrin-4

precorrin-3B

precorrin-3A

precorrin-8x

cobalt-precorrin-6A

cobalt-precorrin-5B

precorrin-5

precorrin-7

precorrin-6B

cobalt-precorrin-6B

precorrin-6A

coenzyme A

(R)-lipoate

oxidized coenzyme F₄₂₀-0

oxidized coenzyme F₄₂₀-2

adenylo-succinate

1-(5-phospho-β-D-ribosyl)-ATP

adenosine 3'-monophosphate

adenosine 2',3'-cyclic monophosphate

guanosine 3'-monophosphate

guanosine 2',3'-cyclic monophosphate

5'-deoxyadenosine

ppGpp

pppGpp

cyclic-AMP

1-(5-phospho-β-D-ribosyl)-AMP

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

NADP⁺

NAD⁺

NADPH

NADH

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

(S)-NADHX

(R)-NADHX

nicotinate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxal

pyridoxine

4-pyridoxate

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

(25S)-3-oxocholest-4-en-26-oyl-CoA

(25S)-3-oxocholest-4-en-26-oate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

malonyl-CoA

acetyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isobutanoyl-CoA

linoleoyl-CoA

α-linolenoyl-CoA

3'-dephospho-CoA

(2R)-ethylmalonyl-CoA

(2S)-ethylmalonyl-CoA

(E)-glutaconyl-CoA

(R)-2-hydroxyglutaryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

4-hydroxybenzoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

5-aminolevulinyl-CoA

oxalyl-CoA

formyl-CoA

3-methylcrotonyl-CoA

isovaleryl-CoA

3-methylglutaconyl-CoA

2-methylbutanoyl-CoA

acryloyl-CoA

3-hydroxypropanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

3-oxoadipyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

3-oxooctadecanoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

hexadecanedioyl-CoA

16-hydroxypalmitoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

palmitoyl-CoA

stearoyl-CoA

myristoyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

decanoyl-CoA

lauroyl-CoA

7-hydroxylauroyl-CoA

octanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

butanoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

trans-dienelactone

cis-dienelactone

D-galactono-1,4-lactone

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

3-sulfopyruvate

L-cysteate

taurine

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

thiocyanate

methanethiol

agmatine

putrescine

cadaverine

spermidine

2-aminoprop-2-enoate

2-iminopropanoate

(2Z)-2-aminobut-2-enoate

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

superoxide

hydroxyl radical

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(R)-4-hydroxymandelate

(S)-4-hydroxymandelate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

sn-glycerol 1-phosphate

2-chloroacetate

2-iminobutanoate

2-iminosuccinate

oxygen

hydrogen sulfide

uroporphyrinogen-III

protoporphyrin IX

protoporphyrinogen IX

coproporphyrinogen I

uroporphyrinogen-I

siroheme

protoheme

cob(II)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

hydrogen cyanide

carboxyphosphinopyruvate

1-carboxyvinyl carboxyphosphonate

3-(hydroxyphosphinoyl)pyruvate

ethylphosphate

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

Fe³⁺

Fe²⁺

Co²⁺

Mo²⁺

Mn²⁺

Zn²⁺

H⁺

K⁺

ammonium

hydrogencarbonate

nitrite

selenate

sulfite

molybdate

selenite

OH^-

hydrogensulfite

nitrate

sulfate

chloride

phosphonate

phosphate

diphosphate

triphosphate

3-chloro-cis,cis-muconate

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

(indole-3-yl)acetonitrile