an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

H₂O

5-dehydro-D-gluconate

S-ribosyl-L-homocysteine

5-aminolevulinate

(S)-4-amino-5-oxopentanoate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

(2S)-2-isopropylmalate

(S)-2-acetolactate

(S)-2-aceto-2-hydroxybutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

CO₂

hydroxypyruvate

glycolate

oxaloacetate

oxalosuccinate

citrate

phosphoenolpyruvate

canavaninosuccinate

O-ureido-L-homoserine

L-arginino-succinate

acetyl phosphate

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

2-succinylbenzoate

1,4-dihydroxy-2-naphthoyl-CoA

4-guanidinobutanoate

4-guanidinobutyramide

acrylate

acrylamide

(indol-3-yl)acetamide

propionamide

thiamine phosphate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

succinate semialdehyde

2-dehydropantoate

urocanate

4-imidazolone-5-propanoate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

glycerone phosphate

β-nicotinate D-ribonucleotide

5-enolpyruvoyl-shikimate 3-phosphate

shikimate 3-phosphate

L-histidinol phosphate

imidazole acetol-phosphate

D-gluconate 6-phosphate

butanoyl phosphate

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

N¹-(5-phospho-β-D-ribosyl)glycinamide

5-phospho-β-D-ribosylamine

histidinol

histidinal

5-(methylsulfanyl)-ribulose 1-phosphate

S-methyl-5-thio-α-D-ribose 1-phosphate

5-(methylsulfanyl)-α-D-ribose

4'-phosphopantetheine

carboxyphosphate

carbamoyl phosphate

orotidine 5'-phosphate

(E)-4-coumaroyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

2,3-didehydroadipyl-CoA

O-D-alanyl-poly(ribitol phosphate)

poly(ribitol phosphate)

S-methyl-5'-thioadenosine

S-adenosyl 3-(methylsulfanyl)propylamine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

aminoacetone

hydrogen peroxide

coproporphyrinogen III

prenyl diphosphate

isopentenyl diphosphate

L-canavanine

α-D-glucosamine 1-phosphate

acetoacetate

P¹,P⁴-bis(5'-guanosyl) tetraphosphate

adenosine 5'-phosphosulfate

adenosine 5'-phosphoselenate

nicotinate adenine dinucleotide

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

2,5-didehydro-D-gluconate

2-keto-D-gluconate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

N-acetylglutamyl-phosphate

prephenate

porphobilinogen

preuroporphyrinogen

(2R,3S)-3-methylmalate

citraconate

2-oxovalerate

3-ethylmalate

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

3-methyl-2-oxobutanoate

DNA without lesion

autoinducer 2

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

isochorismate

1,4-dihydroxy-2-naphthoate

anthranilate

N-(5-phosphoribosyl)-anthranilate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

5-amino-6-(D-ribitylamino)uracil

1-deoxy-L-glycero-tetrulose 4-phosphate

hexulose 6-phosphate

7-carboxy-7-deazaguanine

(S)-3-methyl-2-oxopentanoate

3-hydroxy-5- oxohexanoyl-CoA

3-hydroxy-5-oxohexanoate

4-aminobutanoate

3-oxopropanoate

L-β-lysine

xanthine

L-selenocystathionine

β-D-ribosylnicotinate

hop-22(29)-ene

squalene

methylsalicylate

salicyl alcohol

D-erythro-imidazole-glycerol-phosphate

D-galactosamine-6-phosphate

N-acetyl-D-galactosamine 6-phosphate

5-oxo-L-proline

2-phosphoglycolate

carbonic acid

3-mercaptopyruvate

phloretin

pinocembrin chalcone

3-dehydro-2-deoxy-D-gluconate

2-deoxygluconate

(R)-pantothenate

3-dehydroquinate

3-deoxy-D-arabino-heptulosonate 7-phosphate

3-phosphooxypyruvate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

5-dehydro-2-deoxy-D-gluconate

5-dehydro-2-deoxy-D-gluconate 6-phosphate

3-ureidopropanoate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-dehydro-3-deoxy-D-gluconate

N-carbamoyl-2-oxoglycine

(S)-ureidoglycolate

4-chlorobenzoate

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

4-fumaryl-acetoacetate

chloramphenicol

creatinine

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

shikimate

2-iminoacetate

(R)-4'-phosphopantothenate

N-methylhydantoin

5-carboxymethyl-2-hydroxymuconate

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

(indol-3-yl)pyruvate

N-succinyl-2-amino-6-ketopimelate

(S)-2,3,4,5-tetrahydrodipicolinate

(S)-dihydroorotate

(R)-4'-phosphopantothenoyl-L-cysteine

thiamine diphosphate

selenophosphate

(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline

(S)-5-hydroxyisourate

3-hydroxyanthranilate

dimethylthiophosphate

diethylphosphate

diethylthiophosphate

N-Formyl-L-kynurenine

2-aminoacetaldehyde

coenzyme F₃₉₀-A

N-carbamoyl-D-phenylglycine

D-phenylhydantoin

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

urea

propanoyl phosphate

N-acetyl-D-muramate 6-phosphate

hydrogenobyrinate a,c-diamide

hydrogenobyrinate

2-C-methyl-D-erythritol 4-phosphate

(S)-2,3-dihydrodipicolinate

(lipoyl)adenylate

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(5-phospho-D-ribitylamino)uracil

(4-hydroxyphenyl)acetate

2-hydroxy-3-oxosuccinate

meso-tartrate

L-tartrate

3-dehydroshikimate

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

ethanolamine

N-acetyl-L-glutamate 5-semialdehyde

O-acetyl-L-serine

ManNAc-GlcNAc-PP-undecaprenol

CDP-glycerol

3'-phosphoadenylyl-sulfate

4-hydroxy-2-nonenal

N-acetyl-α-D-glucosaminyldiphospho-ditrans,octacis-undecaprenol

hydrogen selenide

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

gallate

2-oxoglutaramate

1,2,3,5-tetrahydroxybenzene

pyrogallol

phloroglucinol

dihydrophloroglucinol

6-phospho D-glucono-1,5-lactone

N-succinyl-L,L-2,6-diaminopimelate

glutathione disulfide

oxamate

formamide

quinolinate

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

2-keto-L-gulonate

glutathioselenol

selenodiglutathione

4-oxoglutaramate

1,2-dihydro-β-NADP

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

enol-phenylpyruvate

ammonia

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

ethene

(indol-3-yl)acetate

methyl (indol-3-yl)acetate

phenylacetate

3,22-dioxochol-4-en-24-oyl-CoA

3-oxo-4-pregnene-20-carboxyl-CoA

cholate

glycocholate

acetyl-CoA

malonyl-CoA

2-methylacetoacetyl-CoA

succinyl-CoA

3'-dephospho-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

(E)-2-methylcrotonoyl-CoA

3-hydroxyisovaleryl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

linoleoyl-CoA

α-linolenoyl-CoA

5-aminolevulinyl-CoA

isovaleryl-CoA

dihydro-4-coumaroyl-CoA

isobutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

2-trans-nonenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

4-cis-undecenoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-hydroxybenzoyl-CoA

(3E)-dec-3-enoyl-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

4-trans-undecenoyl-CoA

6-trans-3-oxo-tridecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

(+)-7-epi-jasmonoyl-CoA

4-chlorobenzoyl-coA

(S)-3-hydroxy-3-methylglutaryl-CoA

phenylacetyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

3-oxoadipyl-CoA

3-oxo-myristoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-palmitoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

3-oxopentanoyl-CoA

acetoacetyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxododecanoyl-CoA

16-hydroxypalmitoyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

hexadecanedioyl-CoA

stearoyl-CoA

palmitoyl-CoA

myristoyl-CoA

18-hydroxystearoyl-CoA

18-hydroxyoleoyl-CoA

pristanoyl-CoA

2-hydroxyphytanoyl-CoA

phytanoyl-CoA

7-hydroxylauroyl-CoA

lauroyl-CoA

octanoyl-CoA

decanoyl-CoA

hexanoyl-CoA

propanoyl-CoA

pentanoyl-CoA

butanoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3Z)-dodec-3-enoyl-CoA

phytenoyl-CoA

(E)-cinnamoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

crotonyl-CoA

(R)-methylmalonyl-CoA

(S)-methylmalonyl-CoA

D-glucono-1,5-lactone

all-trans-retinyl palmitate

S-methyl-L-methionine

S-trans-1-propenyl-L-cysteine

γ-L-glutamyl-(S)-trans-1-propenyl-L-cysteine

γ-L-glutamyl-(S)-methyl-L-cysteine

S-allyl-L-cysteine

γ-L-glutamyl-[(S)-allyl]-L-cysteine

S-(hydroxymethyl)glutathione

glutathione

(R)-S-lactoylglutathione

(2R)-phospho-3-sulfolactate

3-sulfopyruvate

L-cysteate

taurine

isethionate

1-butanesulfonate

3-(N-morpholino)propanesulfonate

(2R)-3-sulfolactate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

5-(2-hydroxyethyl)-4-methylthiazole

methanethiol

thiocyanate

S-sulfanylglutathione

glycine betaine

betaine aldehyde

agmatine

spermidine

putrescine

(2Z)-2-aminobut-2-enoate

2-aminoprop-2-enoate

2-iminopropanoate

ferrichrome

glycerophosphoserine

glycerophosphoglycerol

sn-glycero-3-phosphoethanolamine

1-oleoyl-2-palmitoyl-phosphatidylglycerol

(2E,6E)-farnesyl diphosphate

pristanate

superoxide

hydroxyl radical

sulfate

hydrogencarbonate

sulfite

selenate

selenide

molybdate

OH^-

selenite

hydrogensulfite

chloride

phosphate

diphosphate

triphosphate

Fe³⁺

Zn²⁺

Co²⁺

Mo²⁺

Fe²⁺

Mg²⁺

ammonium

Na⁺

H⁺

2-chloroacetate

5-chloro-5-deoxyribose 1-phosphate

5'-chloro-5'-deoxyadenosine

5-chloro-4-hydroxy-2-oxopentanoate

5-chloro-5-deoxy-D-ribonate

5-fluoro-5-deoxy-D-ribose 1-phosphate

5'-deoxy-5'-fluoroadenosine

chloramphenicol 3-acetate

4-nitrophenol

paraoxon

parathion

2,4-dinitrophenyl-S-glutathione

1-chloro-2,4-dinitrobenzene

preQ₀

hydrogen cyanide

(S)-2-hydroxyglutarate

2-methoxy-6-(all-trans-octaprenyl)phenol

2-octaprenylphenol

(S)-3-hydroxy-isobutanoate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(R)-citramalate

(S)-ureidoglycine

α-D-glucosamine 6-phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

sn-glycerol 3-phosphate

2-iminobutanoate

2-iminosuccinate

hydrogen sulfide

oxygen

protoporphyrin IX

protoporphyrinogen IX

uroporphyrinogen-III

Mg-protoporphyrin

coproporphyrinogen I

uroporphyrinogen-I

protoheme

cob(I)alamin

adenosylcobalamin

cobyrinate

cob(II)yrinate a,c-diamide

cob(II)yrinate c-monoamide

adenosylcobinamide

cob(I)inamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)yrinate a,c-diamide

ethylphosphate

L-homocysteine

4-methylphenol

DNA with lesion

(glutathion-S-yl)-4-hydroxy-2-nonenal

a methyl group

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

L-cysteinylglycine

D-alanyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

hypoglycin B

carbamate

L-kynurenine

L-α-amino-ε-keto-pimelate

L-aspartyl-4-phosphate

L-selenomethionine

seleno-L-homocysteine

L-2-amino-3-oxobutanoate

2-hydroxy-5-oxoproline

O-acetyl-L-homoserine

trans-4-hydroxy-L-proline

3-hydroxy-L-kynurenine

N-carbamoylglycine

formyl-L-isoglutamine

N-acetyl-L-citrulline

N-acetyl-L-ornithine

N-formimino-L-glutamate

N-acetyl-L-glutamate

N-acetyl-L-methionine

sarcosine

N-carbamoyl-L-aspartate

S-methyl-L-cysteine

3-phospho-L-serine

L-cysteine

L-methionine

L-cystathionine

L-alanine

L-aspartate

L-valine

L-phenylalanine

L-tyrosine

L-tryptophan

L-serine

L-glutamate

L-ornithine

L-arginine

L-threonine

L-proline

L-glutamine

L-histidine

L-isoleucine

L-leucine

L-lysine

L,L-diaminopimelate

L-asparagine

L-isoglutamine

D-glutamate

D-alanine

glycine

creatine

N-carbamoylsarcosine

β-alanine

(R)-β-lysine

(R)-3-amino-2-methylpropanoate

(S)-3-amino-2-methylpropanoate

L-citrulline

O-succinyl-L-homoserine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-homoserine

hypoglycin A

L-canaline

meso-diaminopimelate

Gro-P-ManNAc-GlcNAc-PP-undecaprenol

butanoate

7-hydroxylaurate

laurate

octanoate

decanoate

stearate

palmitate

pentanoate

18-hydroxystearate

16-hydroxypalmitate

18-hydroxyoleate

phytenate

oleate

(15Z)-tetracosenoate

linoleate

α-linolenate

leukotriene-E4

leukotriene-D4

(R)-lactate

(R)-3-hydroxybutanoate

acetate

pyruvate

formate

propanoate

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

2-oxobutanoate

glyoxylate

2-oxoglutarate

4-(methylsulfanyl)-2-oxobutanoate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

3-oxoadipate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-(carbamoylamino)-2-methylpropanoate

chorismate

(3E)-2-oxohex-3-enedioate

α,ω-9Z-octadecenedioate

succinate

fumarate

(S)-malate

salicylate

protocatechuate

2,3-dihydroxybenzoate

5-deoxy-D-glucuronate

D-gluconate

(R)-pantoate

D-mannonate

allantoate

orotate

(S)-1-pyrroline-5-carboxylate

acetamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

5-amino-4-imidazolecarboxyamide

phosphoribulosylformimino-AICAR-phosphate

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

(S)-(+)-allantoin

all-trans-retinol

mono-trans,octa-cis-decaprenyl diphosphate

trans,octacis-decaprenyl phosphate

geranyl diphosphate

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

iron(III) dicitrate

betanidin quinone

betanidin

3-benzyl-3,6 -bis(cysteinyl)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-octaprenyl-4-hydroxybenzoate

di-trans,octa-cis-undecaprenyl phosphate

di-trans,octa-cis-undecaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

geranylgeranyl diphosphate

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

L-idonate

1-(β-D ribofuranosyl)nicotinamide

sucrose

maltotriose

maltotetraose

maltohexaose

maltoheptaose

maltopentaose

stachyose

raffinose

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

arbutin-6-phosphate

methyl β-D-glucoside 6-phosphate

salicin 6-phosphate

UDP-α-D-galactose

5-phospho-α-D-ribose 1-diphosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

α-D-galactose 1-phosphate

α-D-glucopyranose 1-phosphate

N-acetyl-α-D-glucosamine 1-phosphate

β-D-fructofuranose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

β-D-glucose 6-phosphate

α-D-glucose 6-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

aldehydo-D-ribose 5-phosphate

α-D-ribose 5-phosphate

β-D-ribose 5-phosphate

D-ribulose 5-phosphate

D-glyceraldehyde 3-phosphate

N-monoacetylchitobiose 6'-phosphate

N,N'-diacetylchitobiose 6'-phosphate

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faecium, tetrapeptide)

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan dimer (mycobacteria)

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-α-D-glucose

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysine

UDP-N-acetyl-α-D-mannosamine

UDP-N-acetyl-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

ADP-α-D-glucose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

GDP-β-L-fucose

glycerol

D-mannitol 1-phosphate

β-D-fructofuranose

N-acetylmuramate

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetyl-β-D-glucosamine

keto-D-fructose

β-D-galactopyranose

α-D-galactopyranose

D-glyceraldehyde

α-D-ribofuranose

glycolaldehyde

D-xylulose

hydroquinone

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

3,4-dihydroxyphenylacetate

myo-inositol

scyllo-inositol

1D-chiro-inositol

3D-(3,5/4)-trihydroxycyclohexane-1,2-dione

scyllo-inosose

1-keto-D-chiro-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

ethanol

butan-1-ol

methanol

3-(N-morpholino)propanal

acetaldehyde

butan-1-al

formaldehyde

methylglyoxal

diacetyl

isoliquiritigenin

2',4,4',6'-tetrahydroxychalcone

2,5-piperidinedione

menadione

caldariellaquinone

urate

6-hydroxy-2-cyclohexen-one-carboxylate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

4-hydroxybenzoate

4-aminophenol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

methyl parathion

amino-parathion

6-isobutyl-4-hydroxy-2-pyrone

6,7-dehydrobaicalein

baicalein

menadiol

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

caldariellaquinol

3-demethylubiquinol-8

demethylmenaquinol-8

ubiquinol-8

adenine

guanine

AMP

IMP

GMP

XMP

GTP

ATP

ITP

GDP

ADP

IDP

dGDP

dADP

dIDP

dGTP

dATP

dITP

dAMP

dGMP

hypoxanthine

adenosine

inosine

guanosine

xanthosine

2'-deoxyinosine

2'-deoxyguanosine

2'-deoxyadenosine

7,8-dihydrolumazine

FMNH₂

FADH₂

reduced riboflavin

FMN

riboflavin

FAD

6,7-dimethyl-8-(1-D-ribityl)lumazine

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

tetrahydromethanopterin

7,8-dihydroneopterin 3'-triphosphate

7,8-dihydropterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydromonapterin

7,8-dihydroneopterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

(7,8-dihydropterin-6-yl)methyl diphosphate

molybdopterin adenine dinucleotide

cyclic pyranopterin phosphate

molybdopterin

5,10-methylene-tetrahydromethanopterin

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

MoO₂-molybdopterin cofactor

hydantoin

precorrin-2

precorrin-1

preQ₁

isoguanine

thymine

uracil

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

dUTP

dUDP

CTP

CDP

dCTP

dCDP

UTP

UDP

dTTP

dTDP

5,6-dihydrothymine

5,6-dihydrouracil

dUMP

dCMP

dTMP

cytidine-3'-monophosphate

uridine 3'-monophosphate

dipicolinate

UMP

CMP

uridine

cytidine

2'-deoxyuridine

2'-deoxycytidine

thymidine

coenzyme A

(R)-lipoate

oxidized coenzyme F₄₂₀-2

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

adenylo-succinate

5'-deoxyadenosine

pppGpp

guanosine 3'-monophosphate

adenosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-AMP

1-(5-phospho-β-D-ribosyl)-ATP

ppGpp

8-oxo-GTP

8-oxo-dGTP

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

β-nicotinamide D-ribonucleotide

5-hydroxy-CMP

5-hydroxy-CTP

2-hydroxy-dATP

cyclic di-3',5'-guanylate

two adjacent thymidines in DNA

(5R)-5,6-dihydro-5-(thymidin-7-yl)thymidine (in DNA)

NADP⁺

NAD⁺

NADPH

NADH

(S)-NADHX

(R)-NADHX

nicotinate

thiamine

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

pyridoxamine 5'-phosphate

pyridoxamine

pyridoxine

pyridoxal