an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

autoinducer 2

mercuriphenyl acetate

urea

2-amino-3-carboxymuconate-6-semialdehyde

N-Formyl-L-kynurenine

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

6-phospho D-glucono-1,5-lactone

(R)-4-phosphopantoate

2-dehydropantoate

hypotaurine

(2S)-lactyl-2-diphospho-5'-guanosine

7,8-didemethyl-8-hydroxy-5-deazariboflavin

oxalate

D-phenylhydantoin

N-carbamoyl-D-phenylglycine

homogentisate

(2-hydroxyphenyl)acetate

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

5-amino-6-(D-ribitylamino)uracil

glutathione disulfide

4-trimethylammoniobutanal

4-aminobutanoate

N¹-(5-phospho-β-D-ribosyl)glycinamide

3-hydroxyanthranilate

(R)-pantothenate

glycolate

shikimate

shikimate 3-phosphate

lipid X

lipid A disaccharide (E. coli)

glutathionylspermidine

acetoacetate

pseudouridine 5'-phosphate

3-deoxy-D-arabino-heptulosonate 7-phosphate

carboxynorspermidine

norspermidine

(S)-2-amino-6-oxohexanoate

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

(S)-mandelate

(R)-mandelate

nicotinate adenine dinucleotide

3-deoxy-D-manno-octulosonate 8-phosphate

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

carboxyphosphate

β-D-ribosylnicotinate

2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

DNA without lesion

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

hydrogen peroxide

7-carboxy-7-deazaguanine

hydroxypyruvate

coproporphyrinogen III

dimethylsulfoniopropanoate

acrylate

4-methylbenzyl alcohol

3-methylbenzyl alcohol

3-methylbenzaldehyde

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

1-deoxy-L-glycero-tetrulose 4-phosphate

5-oxo-L-proline

N-acetylglutamyl-phosphate

γ-butyrobetaine

hydrogenobyrinate

3-amino-1-hydroxyacetone 1-phosphate

S-formylglutathione

carbonic acid

selenophosphate

3-phosphooxypyruvate

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

N-succinyl-L,L-2,6-diaminopimelate

citraconate

(2R,3S)-3-methylmalate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

3-deoxy-α-D-manno-2-octulosonate

4-hydroxy-2-nonenal

hydrogenobyrinate a,c-diamide

orotidine 5'-phosphate

histidinal

histidinol

propanoyl phosphate

D-gluconate 6-phosphate

O-acetyl-L-serine

2-iminoacetate

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

(4,5-dihydro-5-oxofuran-2-yl)-acetate

succinate semialdehyde

xanthine

4'-phosphopantetheine

(R)-4'-phosphopantothenate

(R)-4'-phosphopantothenoyl-L-cysteine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

N⁵-carboxyaminoimidazole ribonucleotide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

3-oxopropanoate

3-dehydroquinate

3-dehydroshikimate

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

D-erythro-imidazole-glycerol-phosphate

imidazole acetol-phosphate

L-histidinol phosphate

α-D-glucosamine 1-phosphate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

5-phospho-β-D-ribosylamine

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

carbamoyl phosphate

L-canavanine

N-acetyl-L-glutamate 5-semialdehyde

β-nicotinate D-ribonucleotide

quinolinate

(S)-dihydroorotate

5-aminolevulinate

citrate

anthranilate

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

2,3-didehydroadipyl-CoA

oxaloacetate

phosphoenolpyruvate

prephenate

glycerone phosphate

isopentenyl diphosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

(2S)-2-isopropylmalate

2-isopropylmaleate

(2R,3S)-3-isopropylmalate

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

4-methyl-2-oxopentanoate

5-enolpyruvoyl-shikimate 3-phosphate

3-mercaptopyruvate

oxalosuccinate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-(α-hydroxyethyl)thiamine diphosphate

thiamine diphosphate

3-methyl-2-oxobutanoate

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

H₂O

aminoacetone

CO₂

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-piperideine 6-carboxylate

1,2-dihydro-β-NADP

enol-phenylpyruvate

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1-pyrroline

ammonia

N-(5-phosphoribosyl)-anthranilate

selenodiglutathione

glutathioselenol

(S)-ureidoglycolate

hydrogen selenide

3-maleylpyruvate

(salicyl)adenylate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

4-phosphooxy-L-threonine

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

3-oxo-5,6-didehydrosuberyl-CoA semialdehyde

3-oxo-5,6-didehydrosuberyl-CoA

2-oxepin-2(3H)-ylideneacetyl-CoA

pseudouridine

lipid IV_A

S-ribosyl-L-homocysteine

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

4-methylphenol

phenylacetate

hydrogen cyanide

adenosylcobalamin

cob(I)alamin

cob(II)yrinate c-monoamide

cobyrinate

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

cobalt-sirohydrochlorin

cobalt-precorrin-2

cob(II)yrinate a,c-diamide

protoheme

protoporphyrinogen IX

uroporphyrinogen-III

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrin IX

siroheme

Hg⁰

oxygen

hydrogen sulfide

2-iminopropanoate

2-iminosuccinate

2-iminobutanoate

2-chloroacetate

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

2-phospho-D-glycerate

3-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

(2R)-2,3-dihydroxy-3-methylbutanoate

(S)-ureidoglycine

(R)-citramalate

(S)-methylmalonate-semialdehyde

(R)-methylmalonate-semialdehyde

(S)-4-hydroxymandelate

(R)-4-hydroxymandelate

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

5'-deoxy-5'-fluoroadenosine

5-fluoro-5-deoxy-D-ribose 1-phosphate

fluoroacetaldehyde

fluoroacetate

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

5'-chloro-5'-deoxyadenosine

5-chloro-5-deoxyribose 1-phosphate

3-chlorobenzyl alcohol

3-chlorobenzaldehyde

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

FAD

FADH₂

FMN

(S)-NADHX

(R)-NADHX

caldariellaquinol

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-8

caldariellaquinone

NADPH

NADH

NADP⁺

NAD⁺

glycine betaine

hydroxyl radical

superoxide

(2E,6E)-farnesyl diphosphate

pristanate

Fe³⁺

H⁺

ammonium

Hg²⁺

Fe²⁺

Co²⁺

OH^-

sulfite

selenide

selenate

hydrogencarbonate

sulfate

hydrogensulfite

selenite

molybdate

phosphate

triphosphate

diphosphate

chloride

dimethyl sulfide

S-(hydroxymethyl)glutathione

glutathione

methanethiol

thiocyanate

S-sulfanylglutathione

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

4-methyl-5-(2-phosphooxyethyl)thiazole

taurine

sulfoacetaldehyde

2-sulfinoacetaldehyde

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

betaine aldehyde hydrate

betaine aldehyde

choline

choline sulfate

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

4-aminobutanal

putrescine

spermidine

cadaverine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

benzene

urate

benzyl alcohol

salicylaldehyde

4-hydroxybenzoate

4-methylbenzaldehyde

benzaldehyde

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

protocatechuate

salicylate

benzoate

4-methylbenzoate

preQ₀

molybdopterin

coenzyme A

oxidized coenzyme F₄₂₀-0

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

MoO₂-molybdopterin cofactor

guanylyl molybdenum cofactor

riboflavin

nicotinate

pyridoxamine 5'-phosphate

pyridoxal 5'-phosphate

pyridoxine 5'-phosphate

L-carnitine

menadione

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

3,24-dioxocholest-4-en-26-oyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

phenylacetyl-CoA

salicyl-CoA

gentisyl-CoA

anthraniloyl-CoA

α-linolenoyl-CoA

linoleoyl-CoA

(2S)-ethylmalonyl-CoA

(2R)-ethylmalonyl-CoA

3'-dephospho-CoA

isobutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

malonyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

methylacrylyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(3S)-hydroxyadipyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

(E)-2-methylcrotonoyl-CoA

2-methylacetoacetyl-CoA

acetyl-CoA

2-methylbutanoyl-CoA

(S)-methylmalonyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E)-oct-2-enoyl-CoA

(2E)-dec-2-enoyl-CoA

(S)-malyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

oleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxyoleoyl-CoA

18-hydroxystearoyl-CoA

16-hydroxypalmitoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(S)-3-hydroxyhexanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(Z)-15-tetracosenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

propanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

pristanoyl-CoA

stearoyl-CoA

palmitoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

3-oxoadipyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

3-oxohexanoyl-CoA

3-oxodecanoyl-CoA

3-oxooctanoyl-CoA

3-oxooctadecanoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

allantoate

(S)-(+)-allantoin

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

phosphoribulosylformimino-AICAR-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

chorismate

fumarate

L-aspartate

succinate

(S)-malate

α,ω-9Z-octadecenedioate

cis-aconitate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-oxoadipate

pyruvate

acetate

formate

propanoate

(R)-lactate

(S)-lactate

decanoate

octanoate

laurate

7-hydroxylaurate

gentisate

(R)-3-hydroxybutanoate

18-hydroxyoleate

18-hydroxystearate

16-hydroxypalmitate

(15Z)-tetracosenoate

α-linolenate

linoleate

stearate

palmitate

oleate

phytenate

(R)-pantoate

orotate

D-gluconate

(S)-1-pyrroline-5-carboxylate

L-kynurenine

carbamate

L-α-amino-ε-keto-pimelate

L-serine

β-alanine

(S)-3-amino-2-methylpropanoate

L-proline

L-alanine

L-leucine

L-glutamine

glycine

D-glutamate

L-glutamate

L-histidine

L-arginine

L-lysine

L-tyrosine

L-phenylalanine

L-tryptophan

D-alanine

L-saccharopine

L-aspartyl-4-phosphate

L-2-amino-3-oxobutanoate

3-phospho-L-serine

N-carbamoyl-L-aspartate

N-acetyl-L-ornithine

N-acetyl-L-glutamate

N-acetyl-L-methionine

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L,L-diaminopimelate

L-ornithine

L-isoleucine

L-valine

L-threonine

L-methionine

L-cysteine

L-cystathionine

L-citrulline

O-succinyl-L-homoserine

L-canaline

L-homoserine

hypoglycin A

O-phospho-L-homoserine

S-adenosyl-L-methionine

L-aspartate 4-semialdehyde

S-adenosyl-L-homocysteine

L-glutamate-5-semialdehyde

meso-diaminopimelate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

2-oxobutanoate

2-oxoglutarate

glyoxylate

hypoglycin B

glycerol

L-iditol

D-sorbitol

ethanol

methanol

1-octanol

myo-inositol

1D-myo-inositol 1-monophosphate

1D-myo-inositol 3-monophosphate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

geranyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

geranylgeranyl diphosphate

all-trans-octaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-octaprenyl-4-hydroxybenzoate

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

1-(β-D ribofuranosyl)nicotinamide

α,α-trehalose

β-D-fructofuranose

keto-L-sorbose

keto-D-fructose

D-xylulose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

D-glyceraldehyde

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

α,α-trehalose 6-phosphate

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

ADP-α-D-glucose

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-α-D-galactose

UDP-α-D-galactofuranose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramate

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

D-glyceraldehyde 3-phosphate

α-D-glucopyranose 1-phosphate

D-sedoheptulose 7-phosphate

D-erythrose 4-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

4-phospho-D-erythronate

β-D-fructose 1,6-bisphosphate

β-D-fructofuranose 6-phosphate

D-fructose 6-phosphate

D-xylulose 5-phosphate

1-deoxy-D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

D-ribulose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

diacetyl

methylglyoxal

1-octanal

formaldehyde

acetaldehyde

(S)-lactaldehyde

phytenal

precorrin-6A

precorrin-3B

precorrin-1

precorrin-4

precorrin-5

precorrin-6B

precorrin-7

precorrin-8x

precorrin-2

precorrin-3A

sirohydrochlorin

cytidine 2',3'-cyclic monophosphate

uridine 2'3'-cyclic monophosphate

dCMP

uridine 3'-monophosphate

cytidine-3'-monophosphate

5,6-dihydrouracil

uracil

5,6-dihydrothymine

dTMP

dUMP

UDP

dCDP

CDP

dUDP

dTDP

dTTP

dCTP

dUTP

CTP

UTP

CMP

UMP

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

thymine

hypoxanthine

adenine

guanine

isoguanine

preQ₁

xanthosine

inosine

guanosine

adenosine

2'-deoxyguanosine

2'-deoxyadenosine

2'-deoxyinosine

ITP

GTP

ATP

IDP

GDP

ADP

IMP

XMP

GMP

AMP

dITP

dGTP

dATP

dIDP

dGDP

dADP

7,8-dihydrolumazine

6,7-dimethyl-8-(1-D-ribityl)lumazine

7,8-dihydropterin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

molybdopterin adenine dinucleotide

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

6-carboxy-5,6,7,8-tetrahydropterin

guanosine 2',3'-cyclic monophosphate

adenosine 2',3'-cyclic monophosphate

1-(5-phospho-β-D-ribosyl)-AMP

ppGpp

5'-deoxyadenosine

adenosine 3'-monophosphate

guanosine 3'-monophosphate

1-(5-phospho-β-D-ribosyl)-ATP

adenylo-succinate

8-oxo-GTP

8-oxo-dGTP

pppGpp

cyclic di-3',5'-guanylate

5-hydroxy-CTP

5-hydroxy-CMP

2-hydroxy-dATP

β-nicotinamide D-ribonucleotide

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA