ID Name References
C1

an oxidized electron donor

C2

a reduced electron donor

C3

a deaminated amino group acceptor

C4

an aminated amino group acceptor

C5

Charged-LEU-tRNAs

C6

LEU-tRNAs

C7

a 2-oxo acid

C8

an amino acid

C9

an acyl-CoA

C10

a carboxylate

C11

an oxidized ferredoxin [iron-sulfur] cluster

C12

a reduced ferredoxin [iron-sulfur] cluster

C13

NAD(P)H

C14

NAD(P)+

C15

an L-tyrosyl-[tRNAtyr]

C16

a tRNAtyr

C17

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

C18

4α,14α-dimethyl-porifersta-8,25(27)-dienol

C24

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

C26

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

C27

isoshowacene

C29

2-hydroxyhexadecanal

C30

16-sinapoyloxypalmitate

C31

3-methylquinolin-2-ol

C32

(22R)-hydroxycholesterol

C37

N-(2-methylpropyl)hydroxylamine

C38

chloroeremomycin

C39

3-hydroxy-3-methylbutanoate

C40

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C41

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C42

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

C43

rhamnosyl tetracyclic spinosyn pseudoaglycone

C44

rhamnosyl tricyclic spinosyn pseudoaglycone

C45

spinosyn tricyclic macrolactone

C46

11-dehydro-15-oxo spinosyn macrolactone

C47

15-oxo spinosyn macrolactone

C48

spinosyn macrolactone

C51

diethylamine N-oxide

C52

triethylamine N-oxide

C53

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

C55

nitroxyl

C57

trans,octacis-decaprenylphospho-β-D-arabinofuranose

C58

1,3-dihydro-2H-imidazol-2-one

C63

2-phenylethyl β-D-glucopyranoside

C64

formyl hopane

C65

ribosyl hopane

C66

adenosyl hopane

C70

(2Z)-2-hydroxypenta-2,4-dienoate

C72

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

C73

(2Z)-2,4-dihydroxypent-2-enoate

C75

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C76

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

C77

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

C79

(+)-3'-hydroxylarreatricin

C80

(+)-larreatricin

C81

2-trans,4-trans-xanthoxin

C1231

5-aminolevulinate

C12214

(S)-4-amino-5-oxopentanoate

C11874

N-succinyl-2-amino-6-ketopimelate

C11543

H2O

C12368

(S)-2,3,4,5-tetrahydrodipicolinate

C11479

phosphoenolpyruvate

C14924

carboxyphosphate

C2191

carbamoyl phosphate

C12218

α-D-glucosamine 1-phosphate

C10349

glycerone phosphate

C1180

N1-(5-phospho-β-D-ribosyl)glycinamide

C1184

5-phospho-β-D-ribosylamine

C12162

hydrogen peroxide

C11812

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

C12048

γ-L-glutamyl 5-phosphate

C3421

formate

C928

CO2

C6359

(S)-2-acetolactate

C6369

(S)-2-aceto-2-hydroxybutanoate

C1621

(R)-2,3-dihydroxy-3-methylpentanoate

C1530

(2R,3S)-3-isopropylmalate

C13417

2-isopropylmaleate

C1438

(2S)-2-isopropylmalate

C3259

2-oxovalerate

C506

3-ethylmalate

C3319

4-methyl-2-oxopentanoate

C13786

(2S)-2-isopropyl-3-oxosuccinate

C1528

2-dehydropantoate

C3417

(S)-3-methyl-2-oxopentanoate

C3262

3-methyl-2-oxobutanoate

C2586

(E)-4-coumaroyl-CoA

C371

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

C15306

2,3-didehydroadipyl-CoA

C651

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

C184

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA

C185

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA

C11711

(R)-1-amino-2-propanol O-2-phosphate

C12158

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

C14074

prenyl diphosphate

C12364

isopentenyl diphosphate

C11873

N-succinyl-L,L-2,6-diaminopimelate

C14003

N-acetyl-L-glutamate 5-semialdehyde

C14053

S-methyl-5-thio-α-D-ribose 1-phosphate

C1196

S-methyl-5'-thioadenosine

C15238

5-deoxy-α-ribose 1-phosphate

C1427

5-enolpyruvoyl-shikimate 3-phosphate

C11652

shikimate 3-phosphate

C2169

betaine aldehyde

C12326

1-deoxy-L-glycero-tetrulose 4-phosphate

C11715

quinolinate

C11857

β-nicotinate D-ribonucleotide

C11826

oxalosuccinate

C891

citrate

C1172

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

C1171

2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine

C9422

nicotinate adenine dinucleotide

C12352

(S)-dihydroorotate

C6444

oxaloacetate

C3684

3-deoxy-α-D-manno-2-octulosonate

C12074

3-deoxy-D-manno-octulosonate 8-phosphate

C873

coproporphyrinogen III

C11767

porphobilinogen

C12394

6-phospho D-glucono-1,5-lactone

C13281

1,4-dihydroxy-2-naphthoyl-CoA

C13824

4-(2'-carboxyphenyl)-4-oxobutyryl-CoA

C11774

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

C11653

shikimate

C11930

N-acetylglutamyl-phosphate

C11832

orotidine 5'-phosphate

C1002

anthranilate

C1631

3-amino-1-hydroxyacetone 1-phosphate

C1548

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

C1265

4-phosphooxy-L-threonine

C11946

N-(5-phosphoribosyl)-anthranilate

C12355

dethiobiotin

C1130

8-amino-7-oxononanoate

C13950

pimeloyl-CoA

C12350

7,8-diaminopelargonate

C11606

thiamine phosphate

C1018

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

C3888

7-carboxy-7-deazaguanine

C11483

glycolate

C13635

β-D-ribosylnicotinate

C1538

2-C-methyl-D-erythritol 4-phosphate

C10794

lipid A disaccharide (E. coli)

C949

lipid X

C1449

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

C12056

L-arginino-succinate

C932

canavaninosuccinate

C6614

O-ureido-L-homoserine

C13196

methyl-1,4-benzoquinol

C13197

2-methyl-1,4-benzoquinone

C13627

DNA without lesion

C1291

(4-hydroxyphenyl)acetate

C14963

2-O-(α-D-glucopyranosyl)-sn-glycerol 3-phosphate

C13793

(2R,3S)-3-methylmalate

C1491

citraconate

C13913

N-carbamoylputrescine

C1096

acrylate

C11794

3'-phosphoadenylyl-sulfate

C996

adenosine 5'-phosphosulfate

C192

adenosine 5'-phosphoselenate

C13850

hydrogenobyrinate a,c-diamide

C13851

hydrogenobyrinate

C1036

α-ribazole 5'-phosphate

C12315

5,6-dimethylbenzimidazole

C1102

O-acetyl-L-serine

C656

(24R,25R)-3α,7α,24-trihydroxy-5β-cholestanoyl CoA

C657

(24E)-3α,7α-dihydroxy-5β-cholest-24-enoyl-CoA

C6349

3-oxopropanoate

C11800

(R)-pantothenate

C12492

1,6-anhydro-N-acetyl-β-muramate

C13225

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

C13954

2-ketocyclohexane-1-carbonyl-CoA

C13968

2-hydroxy-cyclohexane-1-carbonyl-CoA

C188

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C194

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

C11802

4'-phosphopantetheine

C6361

acetoacetate

C1353

3-phosphooxypyruvate

C638

5-(methylsulfanyl)-ribulose 1-phosphate

C13649

N-ethylammeline

C13650

deethylsimazine

C571

4-hydroxy-2-nonenal

C13758

12-α-hydroxy-3 oxochola-4,6-dienoate

C13759

7-α,12-α-dihydroxy-3-oxochol-4-enoate

C1367

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

C1371

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

C3269

(S)-4-hydroxy-2-oxopentanoate

C3279

2-oxopent-4-enoate

C10260

ADP-D-glycero-β-D-manno-heptose

C12393

D-glycero-β-D-manno-heptose 1-phosphate

C12443

pregn-5-ene-3,20-dione

C12444

pregn-5-ene-3,20-dione-17-ol

C1072

5-α-androstan-3β,17β-diol

C12442

5-androstene-3,17-dione

C10512

12α-hydroxy-3-oxocholan-24-oyl-CoA

C4198

deoxycholoyl-CoA

C1439

allopregnanolone

C10510

3-oxocholoyl-CoA

C898

cis-3-phenylcyclohexa-3,5-diene-1,2-diol

C11760

prephenate

C1431

3-dehydroshikimate

C12369

3-dehydroquinate

C232

(2Z,4E)-2-hydroxyhexa-2,4-dienedioate

C13604

2-hydroxy-6-oxohepta-2,4-dienoate

C13605

(2Z,4E)-2-hydroxy-5-methyl-6-oxohexa-2,4-dienoate

C15305

(2E,4Z)-2-hydroxymuconate

C1447

(2E,4Z)-2-hydroxy-6-oxohepta-2,4-dienoate

C15304

(2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoate

C3850

5-amino-6-(D-ribitylamino)uracil

C1182

N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide

C1078

(S)-2-amino-6-oxohexanoate

C4620

S-formylglutathione

C13928

urea-1-carboxylate

C7865

urea

C11754

propanoyl phosphate

C1305

4-fumaryl-acetoacetate

C102

2,6-dioxo-6-phenylhexa-3-enoate

C893

cis,cis-muconate

C266

(2E)-3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate

C2588

3-(2,3-dihydroxyphenyl)propanoate

C924

3-(5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate

C2585

3-phenylpropanoate

C14185

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

C11737

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

C3343

(3R)-3-hydroxy-2-oxo-4 phosphooxybutanoate

C1429

3-deoxy-D-arabino-heptulosonate 7-phosphate

C1407

3-hydroxypropanoate

C11688

S-adenosyl 3-(methylsulfanyl)propylamine

C11838

2-succinylbenzoate

C12125

imidazole acetol-phosphate

C12390

D-erythro-imidazole-glycerol-phosphate

C3656

D-gluconate 6-phosphate

C1503

2-dehydro-3-deoxy-D-gluconate 6-phosphate

C793

ε-caprolactone

C12400

cyclohexanone

C841

2,3-dihydroxy-p-cumate

C843

(2R,3S)-2,3-dihydroxy-2,3-dihydro-p-cumate

C902

(1R,2S)-1,2-dihydronaphthalene-1,2-diol

C12848

N5-carboxyaminoimidazole ribonucleotide

C6099

lipid IVA

C11710

(R)-4'-phosphopantothenoyl-L-cysteine

C352

2-iminoacetate

C14181

2-maleylacetate

C927

carbon monoxide

C1480

2-protocatechuoylphloroglucinolcarboxylate

C2580

methylsalicylate

C15056

salicyl alcohol

C1363

(4,5-dihydro-5-oxofuran-2-yl)-acetate

C13689

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

C13546

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

C11851

N,N-dimethylaniline-N-oxide

C11853

N,N-dimethylaniline

C14198

nicotine-1'-N-oxide

C933

L-canavanine

C12139

preuroporphyrinogen

C12176

histidinol

C12178

histidinal

C13681

5-carboxymethyl-2-hydroxymuconate

C12044

L-histidinol phosphate

C1519

2-hydroxy-5-(methylsulfanyl)-3-oxopent-1-enyl 1-phosphate

C13630

1,2-dihydroxy-5-(methylsulfanyl)pent-1-en-3-one

C3338

2-oxoglutaramate

C12494

N-acetyl-D-muramate 6-phosphate

C1268

(R)-4'-phosphopantothenate

C11863

naphthalene-1,2-diol

C3287

trans-O-hydroxybenzylidenepyruvate

C12324

autoinducer 2

C12029

S-ribosyl-L-homocysteine

C12096

isochorismate

C13284

(1R,6R)-6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate

C13283

2-succinyl-5-enolpyruvoyl-6-hydroxy-3-cyclohexene-1-carboxylate

C12325

1,4-dihydroxy-2-naphthoate

C15200

(2Z,4E)-2-hydroxy-6-oxonona-2,4-diene-1,9-dioate

C2541

3-(3-hydroxyphenyl)propanoate

C15311

muconolactone

C13900

2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate

C12171

homogentisate

C1283

4-maleyl-acetoacetate

C4674

glutathione disulfide

C3629

vanillin

C1369

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

C1417

(1E,2Z)-3-hydroxy-5,9,17-trioxo-4,5:9,10-disecoandrosta-1 (10),2-dien-4-oate

C3376

(S)-4-hydroxy-2-oxohexanoate

C193

(2Z,4Z)-2-hydroxyhexa-2,4-dienoate

C187

5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

C186

(2E)-3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]prop-2-enoyl-CoA

C183

3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-indene-4-carboxylate

C13648

N-ethylammelide

C13854

hydrogen selenide

C4688

glutathioselenol

C4690

selenodiglutathione

C1293

(2E,4Z)-4-hydroxy-6-oxohexa-2,4-dienoate

C11604

thiamine diphosphate

C13702

1-piperideine 6-carboxylate

C585

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C9431

1,2-dihydro-β-NADP

C583

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

C12274

enol-phenylpyruvate

C1010

ammonia

C13855

(2E)-2-hydroxypenta-2,4-dienoate

C3290

4-oxalocrotonate

C3355

(3E)-2-oxopent-3-enoate

C582

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C584

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

C1328

L-cysteinylglycine

C8518

γ-L-glutamyl-L-cysteine

C1434

D-alanyl-D-alanine

C2576

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

C2562

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C11520

hypoglycin B

C5032

carbamate

C3536

L-α-amino-ε-keto-pimelate

C12303

L-citrulline

C5612

L-cysteine

C5583

L-methionine

C5607

L-glutamate

C5609

L-glutamine

C12067

glycine

C5596

L-aspartate

C5588

L-leucine

C5603

L-isoleucine

C5571

L-valine

C5581

L-proline

C5579

L-serine

C2469

L-phenylalanine

C5597

L-alanine

C5577

L-threonine

C5642

L-arginine

C5573

L-tyrosine

C5584

L-lysine

C5575

L-tryptophan

C5605

L-histidine

C12203

S-adenosyl-L-homocysteine

C15292

S-adenosyl-L-methionine

C12239

L-aspartate 4-semialdehyde

C12245

L-homoserine

C12247

L-homocysteine

C12231

L-ornithine

C12229

O-phospho-L-homoserine

C12293

3-sulfino-L-alanine

C12227

O-succinyl-L-homoserine

C12237

L-canaline

C12261

hypoglycin A

C12233

L-glutamate-5-semialdehyde

C5585

meso-diaminopimelate

C12073

L-aspartyl-4-phosphate

C12065

L-saccharopine

C12165

2-hydroxy-5-oxoproline

C11955

O-acetyl-L-homoserine

C10821

trans-4-hydroxy-L-proline

C15000

N-acetyl-L-ornithine

C14973

N-acetyl-L-glutamate

C14976

N-acetyl-L-methionine

C13322

N-carbamoyl-L-aspartate

C3652

L-threonine 3-O-phosphate

C3402

3-phospho-L-serine

C5580

L,L-diaminopimelate

C8799

D-alanine

C8797

D-glutamate

C11441

β-alanine

C11433

(S)-3-amino-2-methylpropanoate

C11421

protocatechuate

C11414

vanillate

C2521

trans-cinnamate

C11429

salicylate

C8974

4-aminobenzoate

C8968

benzoate

C11517

acetate

C11482

(R)-pantoate

C11481

orotate

C11510

5-chloro-5-deoxy-D-ribonate

C4985

(S)-1-pyrroline-5-carboxylate

C2774

pristanate

C3383

palmitate

C3387

stearate

C3409

octanoate

C3415

laurate

C3207

7-hydroxylaurate

C3412

decanoate

C538

18-hydroxyoleate

C553

16-hydroxypalmitate

C550

18-hydroxystearate

C13266

(15Z)-tetracosenoate

C13210

oleate

C13260

phytenate

C10655

(9Z,12Z)-15,16-dihydroxyoctadeca-9,12-dienoate

C10672

(9Z,12Z)-15,16-epoxyoctadeca-9,12-dienoate

C10670

(12Z,15Z)-9,10-dihydroxyoctadeca-12,15-dienoate

C10642

(12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoate

C10639

(9Z,15Z)-12,13-dihydroxyoctadeca-9,15-dienoate

C10658

(9Z,15Z)-12,13-epoxy-octadeca-9,15-dienoate

C6379

linoleate

C10590

α-linolenate

C13463

(2R,3S)-2-methylisocitrate

C6185

(R)-lactate

C3288

(3E,5R)-5-carboxy-2-oxohept-3-enedioate

C3308

pyruvate

C3257

2-oxobutanoate

C3301

2-oxoglutarate

C3351

glyoxylate

C3337

5-chloro-4-hydroxy-2-oxopentanoate

C3086

4-(methylsulfanyl)-2-oxobutanoate

C3345

3-phenyl-2-oxopropanoate

C3315

3-(4-hydroxyphenyl)pyruvate

C6371

3-oxoadipate

C8534

cis-aconitate

C8542

(2S,3S)-2-methylcitrate

C8536

3-carboxy-cis,cis-muconate

C8531

D-threo-isocitrate

C8950

chorismate

C3316

(3E)-2-oxohex-3-enedioate

C8931

(2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioate

C8923

α,ω-9Z-octadecenedioate

C6443

fumarate

C6442

succinate

C2802

(S)-malate

C8043

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

C8039

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

C8014

phosphoribulosylformimino-AICAR-phosphate

C8025

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

C6829

salicylaldehyde

C10223

α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA

C10226

α-Kdo-(2→6)-lipid IVA

C4819

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

C4821

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

C3727

all-trans-retinyl palmitate

C10966

all-trans-retinol

C4047

3-oxo-24-ethyl-cholest-4-ene

C3955

3-oxo-24-ethyl-cholest-5-ene

C9304

trans,octacis-decaprenyl phosphate

C9681

(S)-nicotine

C5113

4-trans-undecenoyl-CoA

C5114

6-trans-3-oxo-tridecenoyl-CoA

C5084

(3E)-dec-3-enoyl-CoA

C5088

(5E)-3-oxo-dodec-5-enoyl-CoA

C5119

4-cis-undecenoyl-CoA

C5121

6-cis, 3-oxo-tridecenoyl-CoA

C5125

2-trans-nonenoyl-CoA

C5111

4-trans-3-oxo-undecenoyl-CoA

C5098

(3Z,5E)-dodeca-3,5-dienoyl-CoA

C5100

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

C5154

(3E)-tetradec-3-enoyl-CoA

C5156

(2E,4E)-tetradeca-2,4-dienoyl-CoA

C5139

(3E)-undec-3-enoyl-CoA

C5128

2-trans, 4-trans-undecadienoyl-CoA

C5141

2-trans, 4-cis-undecadienoyl-CoA

C4549

3-heptaprenyl-4-hydroxybenzoate

C4545

3-nonaprenyl-4-hydroxybenzoate

C4553

3-octaprenyl-4-hydroxybenzoate

C4550

3-decaprenyl-4-hydroxybenzoate

C7060

3-hexaprenyl-4-hydroxybenzoate

C8322

di-trans,octa-cis-undecaprenyl phosphate

C1813

di-trans,octa-cis-undecaprenyl diphosphate

C5382

all-trans-heptaprenyl diphosphate

C15301

all-trans-nonaprenyl diphosphate

C5383

all-trans-octaprenyl diphosphate

C5364

all-trans-decaprenyl diphosphate

C5368

all-trans-hexaprenyl diphosphate

C4334

1-oleoyl-2-palmitoyl-phosphatidylglycerol

C5904

phosphatidylglycerophosphate (1-octadecenoyl(9Z), 2-palmitoyl)

C6241

1-oleoyl-sn-glycerol 3-phosphate

C10024

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

C10025

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

C4086

1-(β-D ribofuranosyl)nicotinamide

C11619

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

C2151

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

C10263

ADP-α-D-glucose

C10343

2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

C1939

dTDP-α-D-glucose

C1896

dTDP-4-dehydro-β-L-rhamnose

C1885

dTDP-3-dehydro-6-deoxy-α-D-galactopyranose

C1930

dTDP-β-L-rhamnose

C7742

UDP-N-acetyl-α-D-muramoyl-L-alanine

C7822

UDP-N-acetyl-α-D-muramate

C7808

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

C7734

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

C7776

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

C7814

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

C7782

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

C7780

UDP-α-D-glucose

C8666

UDP-α-D-galactose

C7722

UDP-α-D-glucuronate

C5849

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

C7804

UDP-α-D-galactofuranose

C7444

UDP-N-acetyl-α-D-glucosamine

C5150

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

C5094

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C5090

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C5848

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C8305

CMP-3-deoxy-β-D-manno-octulosonate

C10338

5-phospho-α-D-ribose 1-diphosphate

C15289

D-sedoheptulose 7-phosphate

C10340

D-erythrose 4-phosphate

C10356

4-phospho-D-erythronate

C10350

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

C8811

α-D-glucopyranose 1-phosphate

C3186

N-acetyl-α-D-glucosamine 1-phosphate

C2082

β-D-fructofuranose 1-phosphate

C2129

β-D-glucopyranose 1-phosphate

C2989

β-D-fructofuranose 6-phosphate

C10326

β-D-fructose 1,6-bisphosphate

C15303

D-fructose 6-phosphate

C2057

α-D-ribose-1-phosphate

C8708

1-deoxy-D-xylulose 5-phosphate

C8704

D-xylulose 5-phosphate

C8699

D-arabinofuranose 5-phosphate

C8700

aldehydo-D-arabinose 5-phosphate

C10604

D-ribulose 5-phosphate

C5615

D-glyceraldehyde 3-phosphate

C3138

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

C3137

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C973

D-ribulose-1,5-bisphosphate

C10372

a peptidoglycan dimer (S. aureus)

C10379

a peptidoglycan dimer (E. faeciums)

C10374

decaprenyl-pyrophosphoryl-(N-acetylglucosamine)-N-acetylmuramyl-(pentapeptide)

C10362

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

C10370

a peptidoglycan dimer (E. faecium, tetrapeptide)

C10358

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10368

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

C10366

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

C10360

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

C10375

a mature peptidoglycan(n) (meso-DAP containing)

C10377

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

C5529

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

C3122

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetyl-β-D-glucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

C3131

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

C3120

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

C3130

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

C3132

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)5-D-alanyl-D-alanine

C3127

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

C355

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C361

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C358

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

C13230

a peptidoglycan dimer (meso-diaminopimelate containing)

C14591

a peptidoglycan with D,D cross-link (S. aureus)

C14587

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

C9494

D-glyceraldehyde

C2065

aldehydo-D-ribose

C2062

β-D-ribofuranose

C2061

α-D-ribofuranose

C5286

N-acetyl-β-D-glucosamine

C3731

glycerol

C11925

3,5-cyclohexadiene-1,2-diol-1-carboxylate

C2903

hydroquinone

C2764

3-methylcatechol

C2770

4-methylcatechol

C8865

3-sulfocatechol

C2768

catechol

C2769

biphenyl-2,3-diol

C10527

myo-inositol

C13573

1D-myo-inositol 3-monophosphate

C13576

1D-myo-inositol 1-monophosphate

C13580

1D-myo-inositol 5-monophosphate

C13588

1D-myo-inositol 6-monophosphate

C13592

1D-myo-inositol 2-monophosphate

C13584

1D-myo-inositol 4-monophosphate

C5871

1-octanol

C3450

ethanol

C3448

methanol

C6090

methylglyoxal

C3500

acetaldehyde

C3523

1-propanal

C3529

1-octanal

C10048

caldariellaquinone

C2040

diacetyl

C6951

4-hydroxyacetophenone

C7101

biphenyl

C6934

4-hydroxybenzoate

C7019

benzene

C7084

naphthalene

C7033

6-hydroxy-2-cyclohexen-one-carboxylate

C6908

salicyl-6-hydroxy-2-cyclohexene-on-oyl

C2565

2,3-dihydroxy-trans-cinnamate

C2461

3-hydroxy-trans-cinnamate

C4356

quercetin

C2883

all trans-decaprenyl-2-methoxy-6-1,4-benzoquinol

C2879

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

C9503

6-methoxy-3-methyl-2-all-trans-decaprenyl-1,4-benzoquinol

C9501

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

C1869

caldariellaquinol

C1867

3-demethylubiquinol-8

C1863

demethylmenaquinol-8

C1680

menaquinol-8

C5543

ubiquinol-8

C12836

phenol

C6043

4-methylphenol

C8413

indole

C7694

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

C2631

2-hydroxychromene-2-carboxylate

C9455

guanine

C9454

adenine

C7809

AMP

C7741

IMP

C7827

GMP

C7811

XMP

C7844

ATP

C7745

GTP

C7759

ITP

C7757

ADP

C7795

GDP

C7817

IDP

C7807

dGDP

C7747

dIDP

C7823

dADP

C7751

dGTP

C7749

dITP

C7783

dATP

C7743

dAMP

C7840

dGMP

C7785

hypoxanthine

C15088

adenosine

C15091

inosine

C15085

guanosine

C15094

xanthosine

C7848

2'-deoxyguanosine

C14603

tetrahydromethanopterin

C5590

(6R)-6-pyruvoyl-5,6,7,8-tetrahydropterin

C5578

6-carboxy-5,6,7,8-tetrahydropterin

C12680

(7,8-dihydropterin-6-yl)methyl diphosphate

C12730

7,8-dihydroneopterin 3'-triphosphate

C12702

cyclic pyranopterin phosphate

C12718

molybdopterin

C12668

molybdopterin adenine dinucleotide

C10609

7,8-dihydropteroate

C14624

5,10-methylene-tetrahydromethanopterin

C10597

7,8-dihydrofolate monoglutamate

C7134

tetrahydropteroyl tri-L-glutamate

C8566

5-methyltetrahydropteroyl tri-L-glutamate

C6007

MoO2-molybdopterin cofactor

C10050

FADH2

C10049

FMNH2

C10053

FAD

C10052

FMN

C10988

riboflavin

C1659

6,7-dimethyl-8-(1-D-ribityl)lumazine

C9540

preQ1

C7649

isoguanine

C8760

UTP

C8761

CTP

C8724

dUTP

C8772

dCTP

C8752

dUDP

C8732

CDP

C8733

dCDP

C8714

UDP

C8764

dTTP

C8720

dTDP

C8770

dUMP

C8755

dCMP

C8744

dTMP

C6460

cytidine-3'-monophosphate

C8750

cytidine 2',3'-cyclic monophosphate

C6462

uridine 3'-monophosphate

C8747

uridine 2'3'-cyclic monophosphate

C2245

CMP

C2241

UMP

C2702

cytidine

C2706

uridine

C5221

adenosylcobalamin

C9861

cobyrinate

C1705

sirohydrochlorin

C2311

precorrin-2

C2305

precorrin-1

C10614

coenzyme A

C5552

5'-deoxyadenosine

C10288

adenylo-succinate

C5485

1-(5-phospho-β-D-ribosyl)-ATP

C5489

1-(5-phospho-β-D-ribosyl)-AMP

C7653

guanosine 3'-monophosphate

C7645

guanosine 2',3'-cyclic monophosphate

C7641

adenosine 3'-monophosphate

C7841

adenosine 2',3'-cyclic monophosphate

C10267

pppGpp

C10266

ppGpp

C7655

8-oxo-GTP

C7647

8-oxo-dGTP

C4243

β-nicotinamide D-ribonucleotide

C10280

5-hydroxy-CMP

C10290

5-hydroxy-CTP

C10284

2-hydroxy-dATP

C4020

NAD+

C4018

NADP+

C14497

NADPH

C14500

NADH

C11516

glycine betaine

C5392

(S)-NADHX

C5394

(R)-NADHX

C10982

nicotinate

C4214

pyridoxine 5'-phosphate

C4210

pyridoxal 5'-phosphate

C9874

cob(I)alamin

C12556

androsterone

C12545

ethene

C9096

(indol-3-yl)acetate

C9098

methyl (indol-3-yl)acetate

C12483

campesterol

C12485

campest-4-en-3-one

C11744

17-β-hydroxy-5-α-androstan-3-one

C11720

testosterone

C10546

progesterone

C4560

3,24-dioxocholest-4-en-26-oyl-CoA

C4513

24-hydroxy-3-oxocholest-4-en-26-oyl-CoA

C4796

3,22-dioxochol-4-en-24-oyl-CoA

C4490

3-oxo-4-pregnene-20-carboxyl-CoA

C4572

(25S)-3-oxocholest-4-en-26-oyl-CoA

C4520

(25S)-3-oxocholest-4-en-26-oate

C4498

cholest-4-en-3-one

C4476

3-oxo-23,24-bisnorchol-1,4-dien-22-yl-CoA

C4460

cholest-dien-3-one

C4806

5-α-pregnane-3,20-dione

C11726

campest-4-en-3β-ol

C11740

7α-hydroxy-5β-cholestan-3-one

C11742

7α,12α-dihydroxy-5β-cholestan-3-one

C10555

5α-androstane-3,17-dione

C10542

androst-4-ene-3,17-dione

C10538

androsta-1,4-diene-3,17-dione

C10545

9α-hydroxyandrosta-1,4-diene-3,17-dione

C10544

3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C10548

3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione

C11763

5β-cholestane-3α,7α,12α-triol

C11761

17-α-hydroxyprogesterone

C11346

cholest-5-en-3-one

C10462

5β-cholestane-3α,7α-diol

C9456

5-α-androstan-3α,17β-diol

C6306

3-dehydrocholate

C6332

cholate

C6362

deoxycholate

C4901

succinyl-CoA

C4913

malonyl-CoA

C5298

acetyl-CoA

C5314

2-methylacetoacetyl-CoA

C4911

methylacrylyl-CoA

C5274

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

C5272

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

C5285

(E)-2-methylcrotonoyl-CoA

C5310

3-hydroxyisovaleryl-CoA

C5279

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

C5278

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

C5315

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

C5308

(3S)-hydroxyadipyl-CoA

C5266

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

C5265

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

C5276

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

C5263

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

C5270

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

C5260

(+)-7-epi-jasmonoyl-CoA

C5268

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

C5035

4-hydroxybenzoyl-CoA

C5275

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

C4915

α-linolenoyl-CoA

C5056

linoleoyl-CoA

C5306

3-methylcrotonyl-CoA

C4920

isovaleryl-CoA

C4963

(24E)-3α,7α,12α-trihydroxy-5β-cholest-24-enoyl-CoA

C4959

(24R,25R)-3α,7α,12α,24-tetrahydroxy-5β-cholestanoyl CoA

C4899

3-methylglutaconyl-CoA

C4196

choloyl-CoA

C4937

3'-dephospho-CoA

C4922

isobutanoyl-CoA

C5313

2-methylbutanoyl-CoA

C5311

(S)-3-hydroxy-3-methylglutaryl-CoA

C11197

(S)-3-hydroxy-isobutanoyl-CoA

C5635

oleoyl-CoA

C3150

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

C10758

3-oxoadipyl-CoA

C6074

3-oxo-(5Z)-tetradecenoyl-CoA

C6079

3-oxo-myristoyl-CoA

C6083

3-oxo-palmitoyl-CoA

C5843

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

C5845

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

C2009

3-oxopentanoyl-CoA

C2008

acetoacetyl-CoA

C6198

3-oxodecanoyl-CoA

C6200

3-oxohexanoyl-CoA

C6197

3-oxooctanoyl-CoA

C6201

3-oxododecanoyl-CoA

C6558

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

C6566

16-hydroxypalmitoyl-CoA

C6562

hexadecanedioyl-CoA

C5892

palmitoyl-CoA

C5885

stearoyl-CoA

C5890

myristoyl-CoA

C491

18-hydroxyoleoyl-CoA

C480

18-hydroxystearoyl-CoA

C2873

pristanoyl-CoA

C14697

decanoyl-CoA

C14662

hexanoyl-CoA

C14677

octanoyl-CoA

C14674

lauroyl-CoA

C11187

7-hydroxylauroyl-CoA

C1177

propanoyl-CoA

C1175

butanoyl-CoA

C11399

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

C7176

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

C7168

(Z)-15-tetracosenoyl-CoA

C5499

(S)-3-hydroxytetradecanoyl-CoA

C7353

(S)-3-hydroxydecanoyl-CoA

C2744

(S)-3-hydroxyhexadecanoyl-CoA

C15307

(S)-3-hydroxyoctanoyl-CoA

C5922

(S)-3-hydroxyhexanoyl-CoA

C10775

(S)-3-hydroxybutanoyl-CoA

C7152

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

C7149

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

C10774

(3R)-3-hydroxybutanoyl-CoA

C8353

(3Z)-dodec-3-enoyl-CoA

C11400

phytenoyl-CoA

C4301

(2E)-dodec-2-enoyl-CoA

C4299

(2E)-oct-2-enoyl-CoA

C4309

(2E)-dec-2-enoyl-CoA

C4300

trans-Δ2, cis-Δ4-decadienoyl-CoA

C11402

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

C1337

crotonyl-CoA

C5920

(R)-methylmalonyl-CoA

C10100

trans-dienelactone

C10102

cis-dienelactone

C4678

glutathione

C4580

(R)-S-lactoylglutathione

C12637

3-sulfopyruvate

C12587

L-cysteate

C5753

4-methyl-5-(2-phosphooxyethyl)thiazole

C5750

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

C3998

methanethiol

C10301

agmatine

C3576

cadaverine

C3574

spermidine

C3548

putrescine

C6526

(2Z)-2-aminobut-2-enoate

C8958

superoxide

C8965

hydroxyl radical

C7014

sulfate

C7030

nitrate

C7036

hydrogencarbonate

C7016

sulfite

C7020

selenate

C7025

OH-

C7017

selenite

C7057

molybdate

C7034

hydrogensulfite

C7006

chloride

C6762

phosphonate

C6097

phosphate

C6093

diphosphate

C6094

triphosphate

C7864

Fe3+

C11023

Fe2+

C4328

ammonium

C4318

K+

C4320

H+

C11281

2-chloroacetate

C4658

2,4-dinitrophenyl-S-glutathione

C13114

1-chloro-2,4-dinitrobenzene

C13354

preQ0

C13382

acrylonitrile

C6277

2-methoxy-6-(all-trans-octaprenyl)phenol

C6287

2-octaprenylphenol

C6290

(S)-3-hydroxy-isobutanoate

C6293

3-(all-trans-octaprenyl)benzene-1,2-diol

C6741

(S)-methylmalonate-semialdehyde

C6763

(R)-methylmalonate-semialdehyde

C6755

(R)-citramalate

C2150

(2R)-2,3-dihydroxy-3-methylbutanoate

C6437

3-phospho-D-glyceroyl-phosphate

C6425

2-phospho-D-glycerate

C6438

3-phospho-D-glycerate

C8419

sn-glycerol 3-phosphate

C6596

2-iminosuccinate

C6599

2-iminobutanoate

C7121

oxygen

C7118

hydrogen sulfide

C7666

protoporphyrinogen IX

C7658

uroporphyrinogen-III

C7672

coproporphyrinogen I

C7662

uroporphyrinogen-I

C7676

protoporphyrin IX

C7632

siroheme

C6624

protoheme

C9807

adenosylcobinamide

C9869

cob(I)inamide

C9853

adenosyl-cob(III)yrinate a,c-diamide

C9823

cob(I)yrinate a,c-diamide

C9828

cob(II)yrinate a,c-diamide

C9811

cob(II)yrinate c-monoamide

C9800

adenosylcobyrate

C9855

adenosyl-cobinamide phosphate

C9830

adenosylcobinamide-GDP

C1218

adenosylcobalamin 5'-phosphate

C803

ethylphosphate

C10799

DNA with lesion

C4632

(glutathion-S-yl)-4-hydroxy-2-nonenal