an oxidized electron donor

a reduced electron donor

a deaminated amino group acceptor

an aminated amino group acceptor

Charged-LEU-tRNAs

LEU-tRNAs

a 2-oxo acid

an amino acid

an acyl-CoA

a carboxylate

an oxidized ferredoxin [iron-sulfur] cluster

a reduced ferredoxin [iron-sulfur] cluster

NAD(P)H

NAD(P)+

an L-tyrosyl-[tRNAtyr]

a tRNAtyr

(2Z,4Z)-2-hydroxy-5-carboxymuconate-6-semialdehyde

4α,14α-dimethyl-porifersta-8,25(27)-dienol

2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate

4-methylcyclohex-1,5-diene-1-carbonyl-CoA

isoshowacene

2-hydroxyhexadecanal

16-sinapoyloxypalmitate

3-methylquinolin-2-ol

(22R)-hydroxycholesterol

N-(2-methylpropyl)hydroxylamine

chloroeremomycin

3-hydroxy-3-methylbutanoate

2',3',4'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2',3'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

2'-O-methyl-rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tetracyclic spinosyn pseudoaglycone

rhamnosyl tricyclic spinosyn pseudoaglycone

spinosyn tricyclic macrolactone

11-dehydro-15-oxo spinosyn macrolactone

15-oxo spinosyn macrolactone

spinosyn macrolactone

diethylamine N-oxide

triethylamine N-oxide

UDP-2-acetamido-2-deoxy-α-D-ribo-hex-3-uluronate

nitroxyl

trans,octacis-decaprenylphospho-β-D-arabinofuranose

1,3-dihydro-2H-imidazol-2-one

2-phenylethyl β-D-glucopyranoside

formyl hopane

ribosyl hopane

adenosyl hopane

(2Z)-2-hydroxypenta-2,4-dienoate

(2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate

(2Z)-2,4-dihydroxypent-2-enoate

(2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(3R,5Z,8Z,11Z,14Z,17Z)-3-hydroxydocosapentaenoyl-CoA

(5Z,8Z,11Z,14Z,17Z)-3-oxodocosapentaenoyl-CoA

(+)-3'-hydroxylarreatricin

(+)-larreatricin

2-trans,4-trans-xanthoxin

(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

bisorganyltrisulfane

(2S,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran

1-piperideine-2-carboxylate

ammonia

enol-phenylpyruvate

(2S,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

1,2-dihydro-β-NADP

(2R,4S)-2-methyl-2,4-dihydroxydihydrofuran-3-one

5-aminopentanoate

4-oxoglutaramate

selenodiglutathione

glutathioselenol

12α-hydroxy-3-oxochol-4-en-24-oyl-CoA

12α-hydroxy-3-oxochol-4,6-dien-24-oyl-CoA

7α,12α-dihydroxy-3-oxochol-4-en-24-oyl-CoA

(4S,5S)-4,5-dihydroxy-2,6-dioxohexanoate

S-ribosyl-L-homocysteine

autoinducer 2

protoanemonin

hydrogen selenide

5-amino-6-(5-phospho-D-ribitylamino)uracil

5-amino-6-(5-phospho-D-ribosylamino)uracil

3-hydroxypropanoate

(2R)-2-chloro-2,5-dihydro-5-oxofuran-2-acetate

N-succinyl-L,L-2,6-diaminopimelate

4-(γ-L-glutamylamino)butanal

4-(γ-L-glutamylamino)butanoate

4-aminobutanoate

1-piperideine 6-carboxylate

N-ethylammelide

6-phospho D-glucono-1,5-lactone

(7R)-7-(4-carboxybutanamido)cephalosporanate

glutarate

γ-L-glutamyl 5-phosphate

deethylsimazine

N-ethylammeline

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate

3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA

hydroxypyruvate

tartronate semialdehyde

(3R,5S)-3-hydroxy-1-pyrroline-5-carboxylate

shikimate

2-protocatechuoylphloroglucinolcarboxylate

3-deoxy-D-manno-octulosonate 8-phosphate

3-deoxy-α-D-manno-2-octulosonate

7-carboxy-7-deazaguanine

N⁴-(β-N-acetyl-D-glucosaminyl)-L-asparagine

N-acetyl-β-glucosaminylamine

4-amino-2-methyl-5-(phosphooxymethyl)pyrimidine

2-dehydro-3-deoxy-D-galactonate

2-dehydro-3-deoxy-D-galactonate 6-phosphate

5-(methylsulfanyl)-2,3-dioxopentyl 1-phosphate

2-oxoadipate

hydrogenobyrinate

hydrogenobyrinate a,c-diamide

5'-phosphoguanylyl(3'→5')guanosine

methylamine

N-ethylglycine

ethylamine

N-carbamoylputrescine

formamide

5-(methylsulfanyl)-ribulose 1-phosphate

α-D-glucopyranosyl-diphosphoundecaprenol

N⁵-carboxyaminoimidazole ribonucleotide

γ-glutamyl-L-putrescine

(S)-2,3,4,5-tetrahydrodipicolinate

N-succinyl-2-amino-6-ketopimelate

lipid A disaccharide (E. coli)

(S)-2-amino-6-oxohexanoate

2,5-dioxopentanoate

6-amino-2-oxohexanoate

N-(5-phosphoribosyl)-anthranilate

2-maleylacetate

nicotinate adenine dinucleotide

N-ethylmaleimide

N-ethylsuccinimide

phosphonoacetate

S-methyl-5-thio-α-D-ribose 1-phosphate

DNA without lesion

4-amino-4-deoxychorismate

ADP-L-glycero-β-D-manno-heptose

lipid X

aminoacetone

2-methyl-1,4-benzoquinone

methyl-1,4-benzoquinol

L-gulono-1,4-lactone

4-phosphooxy-L-threonine

3-amino-1-hydroxyacetone 1-phosphate

(2S)-2-amino-3-oxo-4-phosphooxybutanoate

thiamine diphosphate

5-amino-6-(D-ribitylamino)uracil

N²-formyl-N¹-(5-phospho-β-D-ribosyl)glycinamide

L-selenocystathionine

7,8-diaminopelargonate

2-phosphoglycolate

5-methylsalicylate

4-methylsalicylate

(1R,2S)-cyclohexa-3,5-diene-1,2-diol

3-methylmuconolactone

muconolactone

(+)-muconolactone

cis,cis-muconate

3-deoxy-D-arabino-heptulosonate 7-phosphate

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate

L-canavanine

urea

D-gluconate 6-phosphate

ethanolamine

2-dehydro-3-deoxy-D-gluconate

2-dehydro-3-deoxy-D-gluconate 6-phosphate

2-oxopent-4-enoate

(S)-4-hydroxy-2-oxopentanoate

3-deoxy-D-glycero-2,5-hexodiulosonate

3-oxocholoyl-CoA

allopregnanolone

deoxycholoyl-CoA

12α-hydroxy-3-oxocholan-24-oyl-CoA

3-(4-hydroxyphenyl)-3-oxo-propanoyl-CoA

4-methyl-3-oxoadipate-enol-lactone

4-methyl-3-oxoadipate

2-dehydropantoate

4-hydroxy-2-nonenal

carbonic acid

3-dehydroquinate

3-dehydroshikimate

pimeloyl-CoA

8-amino-7-oxononanoate

dethiobiotin

S-adenosyl 3-(methylsulfanyl)propylamine

S-methyl-5'-thioadenosine

(4,5-dihydro-5-oxofuran-2-yl)-acetate

hydrogen peroxide

(R)-4'-phosphopantothenoyl-L-cysteine

4'-phosphopantetheine

orotidine 5'-phosphate

1,6-anhydro-N-acetyl-β-muramate

N-acetyl-D-muramate 6-phosphate

3-phosphooxypyruvate

N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate

(2Z,4Z)-2-hydroxyhepta-2,4-dienedioate

(4Z)-2-oxohept-4-enedioate

N-Formyl-L-kynurenine

(2-hydroxyphenyl)acetate

poly (glycerol phosphate)

CDP-glycerol

isochorismate

(2S,3S)-2,3-dihydroxy-2,3-dihydrobenzoate

salicyl alcohol

methylsalicylate

5-methylcytosine

(lipoyl)adenylate

N-acetyl-D-galactosamine 6-phosphate

D-galactosamine-6-phosphate

lipid IV_A

4-methyl-2-oxopentanoate

(2S)-2-isopropyl-3-oxosuccinate

3-ethylmalate

2-oxovalerate

(2R,3S)-3-isopropylmalate

2-isopropylmaleate

citraconate

(2R,3S)-3-methylmalate

N-acetyl-L-glutamate 5-semialdehyde

4-amino-2-methyl-5-(diphosphooxymethyl)pyrimidine

thiamine phosphate

carbon monoxide

glycolate

4-fumaryl-acetoacetate

acetoacetate

2-iminoacetate

N-acetylglutamyl-phosphate

L-arginino-succinate

O-ureido-L-homoserine

canavaninosuccinate

2-(formamido)-N¹-(5-phospho-β-D-ribosyl)acetamidine

5-amino-1-(5-phospho-β-D-ribosyl)imidazole

2-C-methyl-D-erythritol-2,4-cyclodiphosphate

(S)-dihydroorotate

histidinal

histidinol

D-erythro-imidazole-glycerol-phosphate

carbamoyl phosphate

carboxyphosphate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoyl-CoA

shikimate 3-phosphate

5-enolpyruvoyl-shikimate 3-phosphate

4-imidazolone-5-propanoate

urocanate

imidazole acetol-phosphate

L-histidinol phosphate

3-hydroxyanthranilate

2-amino-3-carboxymuconate-6-semialdehyde

5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole

prephenate

quinolinate

3-oxopropanoate

2-C-methyl-D-erythritol 4-phosphate

glutathione disulfide

isopentenyl diphosphate

prenyl diphosphate

(E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate

1-deoxy-L-glycero-tetrulose 4-phosphate

α-D-glucosamine 1-phosphate

5-phospho-β-D-ribosylamine

N¹-(5-phospho-β-D-ribosyl)glycinamide

anthranilate

(R)-pantothenate

(R)-4'-phosphopantothenate

coproporphyrinogen III

β-nicotinate D-ribonucleotide

β-D-ribosylnicotinate

(indol-3-yl)pyruvate

(indol-3 yl)acetyl-CoA

preuroporphyrinogen

2,3-didehydroadipyl-CoA

3S-(4-hydroxyphenyl)-3-hydroxy-propanoyl-CoA

(E)-4-coumaroyl-CoA

(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate

porphobilinogen

(R)-2,3-dihydroxy-3-methylpentanoate

(S)-3-methyl-2-oxopentanoate

glycerone phosphate

homogentisate

4-maleyl-acetoacetate

oxalosuccinate

2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

S-formylglutathione

3-methyl-2-oxobutanoate

(2S)-2-isopropylmalate

(S)-2-aceto-2-hydroxybutanoate

(S)-2-acetolactate

CO₂

(S)-4-amino-5-oxopentanoate

5-aminolevulinate

oxaloacetate

H₂O

citrate

phosphoenolpyruvate

3'-phosphoadenylyl-sulfate

adenosine 5'-phosphoselenate

adenosine 5'-phosphosulfate

(glutathion-S-yl)-4-hydroxy-2-nonenal

DNA with lesion

L-homocysteine

phenylacetate

ethylphosphate

adenosylcobalamin

cob(I)alamin

chlorophyllide a

protochlorophyllide a

Mg-protoporphyrin

cob(II)yrinate c-monoamide

cob(II)yrinate a,c-diamide

cobyrinate

3,8-divinyl protochlorophyllide a

13¹-oxo-magnesium-protoporphyrin IX 13-monomethyl ester

magnesium-protoporphyrin IX 13-monomethyl ester

13¹-hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester

cob(I)yrinate a,c-diamide

adenosyl-cob(III)yrinate a,c-diamide

cob(I)inamide

adenosylcobinamide

protoheme

protoporphyrin IX

uroporphyrinogen-I

coproporphyrinogen I

protoporphyrinogen IX

uroporphyrinogen-III

siroheme

hydrogen sulfide

oxygen

2-iminopropanoate

2-iminobutanoate

2-chloroacetate

β-D-mannosyl-(C55 ω-saturated dolichyl phosphate)

sn-glycerol 3-phosphate

(R)-glycerate

3-phospho-D-glyceroyl-phosphate

3-phospho-D-glycerate

2-phospho-D-glycerate

dTDP-4-dehydro-6-deoxy-α-D-glucopyranose

ω-saturated C55 dolichol phosphate

(2R)-2,3-dihydroxy-3-methylbutanoate

α-D-glucosamine 6-phosphate

S-(4-hydroxy-nonenal-3-yl)-L-cysteinylglycine

(S)-citramalate

(R)-citramalate

(R)-methylmalonate-semialdehyde

(S)-methylmalonate-semialdehyde

3-(all-trans-octaprenyl)benzene-1,2-diol

(S)-3-hydroxy-isobutanoate

2-octaprenylphenol

2-methoxy-6-(all-trans-octaprenyl)phenol

(indole-3-yl)acetonitrile

preQ₀

1-chloro-2,4-dinitrobenzene

2,4-dinitrophenyl-S-glutathione

3-chloro-cis,cis-muconate

bromochloromethane

5-chloro-5-deoxy-D-ribonate

5-chloro-4-hydroxy-2-oxopentanoate

4-chlorosalicylate

5-chlorosalicylate

4-chlorocatechol

Fe³⁺

K⁺

H⁺

ammonium

Na⁺

Mg²⁺

Fe²⁺

Mo²⁺

hydrogensulfite

selenite

OH^-

superoxide

sulfite

selenide

hydrogencarbonate

selenate

sulfate

molybdate

nitrate

phosphate

triphosphate

diphosphate

bromide

chloride

hydroxyl radical

(2E,6E)-farnesyl diphosphate

pristanate

glycerophosphoglycerol

glycerophosphoserine

sn-glycero-3-phosphoethanolamine

glycine betaine

2-aminoprop-2-enoate

(2Z)-2-aminobut-2-enoate

agmatine

cadaverine

putrescine

spermidine

S-(hydroxymethyl)glutathione

methanethiol

glutathione

S-sulfanylglutathione

4-methyl-5-(2-phosphooxyethyl)thiazole

2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate

2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate

L-cysteate

3-sulfopyruvate

(R)-S-lactoylglutathione

3-sulfino-L-alanine

all-trans-retinyl palmitate

cis-dienelactone

trans-dienelactone

D-glucono-1,5-lactone

3-hydroxypropanoyl-CoA

acryloyl-CoA

2-methylbutanoyl-CoA

(S)-3-hydroxy-3-methylglutaryl-CoA

isovaleryl-CoA

3-methylcrotonyl-CoA

3-methylglutaconyl-CoA

trans-feruloyl-CoA

choloyl-CoA

succinyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxobutanoyl)-CoA

6-trans-3-oxo-tridecenoyl-CoA

4-trans-undecenoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-butanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxohexanoyl)-CoA

(5E)-3-oxo-dodec-5-enoyl-CoA

(3E)-dec-3-enoyl-CoA

4-hydroxybenzoyl-CoA

6-cis, 3-oxo-tridecenoyl-CoA

4-cis-undecenoyl-CoA

4-trans-3-oxo-undecenoyl-CoA

2-trans-nonenoyl-CoA

5-cis, 7-trans-3-oxo-tetradecadienoyl-CoA

(3Z,5E)-dodeca-3,5-dienoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-hexanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3-oxooctanoyl)-CoA

isobutanoyl-CoA

dihomo γ-linolenoyl-CoA

(+)-7-epi-jasmonoyl-CoA

3'-dephospho-CoA

α-linolenoyl-CoA

linoleoyl-CoA

malonyl-CoA

2-methylacetoacetyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxybutanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-buta-2-enoyl)-CoA

(3S)-hydroxyadipyl-CoA

(2S,3S)-3-hydroxy-2-methylbutanoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyoctanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-octa-2-enoyl)-CoA

3-hydroxyisovaleryl-CoA

(E)-2-methylcrotonoyl-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3R-hydroxyhexanoyl)-CoA

3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(E-hexa-2-enoyl)-CoA

methylacrylyl-CoA

acetyl-CoA

(R)-methylmalonyl-CoA

crotonyl-CoA

phytenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA

(2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA

(2E)-dec-2-enoyl-CoA

(2E)-oct-2-enoyl-CoA

(S)-malyl-CoA

(3Z)-dodec-3-enoyl-CoA

oleoyl-CoA

ω-carboxy-(9Z)-octadec-9-enoyl-CoA

18-hydroxylinoleoyl-CoA

7-hydroxylauroyl-CoA

18-hydroxyoleoyl-CoA

16-hydroxypalmitoyl-CoA

18-hydroxystearoyl-CoA

(3R,7Z,10Z,13Z,16Z)-3-hydroxydocosatetraenoyl-CoA

(3R,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosapentaenoyl-CoA

(3R)-3-hydroxybutanoyl-CoA

(3R)-3-hydroxypentanoyl-CoA

(3R)-3-hydroxyoctadecanoyl-CoA

(3R,9Z,12Z,15Z,18Z)-3-hydroxytetracosatetraenoyl-CoA

(S)-3-hydroxybutanoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z,21Z)-3-hydroxytetracosahexaenoyl-CoA

(3S,6Z,9Z,12Z,15Z,18Z)-3-hydroxytetracosapentaenoyl-CoA

(S)-3-hydroxydecanoyl-CoA

(S)-3-hydroxyoctanoyl-CoA

(9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoyl-CoA

(9Z,12Z,15Z,18Z,21Z)-3-oxotetracosapentaenoyl-CoA

(4Z,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA

(Z)-15-tetracosenoyl-CoA

butanoyl-CoA

propanoyl-CoA

hexanoyl-CoA

decanoyl-CoA

octanoyl-CoA

lauroyl-CoA

cis-vaccenoyl-CoA

myristoyl-CoA

palmitoleoyl-CoA

palmitoyl-CoA

stearoyl-CoA

pristanoyl-CoA

(7Z,10Z,13Z,16Z)-3-oxodocosatetraenoyl-CoA

hexadecanedioyl-CoA

(4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA

4-methyl-3-oxoadipyl-CoA

3-oxoadipyl-CoA

3-oxododecanoyl-CoA

3-oxooctanoyl-CoA

3-oxodecanoyl-CoA

3-oxohexanoyl-CoA

acetoacetyl-CoA

3-oxopentanoyl-CoA

(6Z,9Z,12Z,15Z,18Z,21Z)-3-oxotetracosahexaenoyl-CoA

(6Z,9Z,12Z,15Z,18Z)-3-oxotetracosapentaenoyl-CoA

3-oxooctadecanoyl-CoA

3-oxo-palmitoyl-CoA

3-oxo-(5Z)-tetradecenoyl-CoA

3-oxo-myristoyl-CoA

(S)-3-hydroxy-isobutanoyl-CoA

ethene

(25S)-3-oxocholest-4-en-26-oate

(25S)-3-oxocholest-4-en-26-oyl-CoA

5-α-pregnane-3,20-dione

3-oxo-4-pregnene-20-carboxyl-CoA

3,22-dioxochol-4-en-24-oyl-CoA

deoxycholate

cholate

3-dehydrocholate

5β-cholestane-3α,7α,12α-triol

5β-cholestane-3α,7α-diol

androsterone

5-α-androstan-3α,17β-diol

17-β-hydroxy-5-α-androstan-3-one

campest-4-en-3β-ol

7α,12α-dihydroxy-5β-cholestan-3-one

7α-hydroxy-5β-cholestan-3-one

androst-4-ene-3,17-dione

campest-4-en-3-one

5α-androstane-3,17-dione

testosterone

(+)-7-epi-jasmonate

methyl (indol-3-yl)acetate

(indol-3-yl)acetate

thiamine

riboflavin

nicotinate

all-trans-retinol

tetrahydropteroyl tri-L-glutamate

5-methyltetrahydropteroyl tri-L-glutamate

7,8-dihydrofolate monoglutamate

5,10-methylene-tetrahydromethanopterin

tetrahydromethanopterin

pyridoxal

pyridoxine

pyridoxamine

pyridoxamine 5'-phosphate

pyridoxine 5'-phosphate

pyridoxal 5'-phosphate

menadione

adenosine 2',3'-cyclic monophosphate

guanosine 2',3'-cyclic monophosphate

isoguanine

8-oxo-GTP

8-oxo-GMP

8-oxo-dGTP

8-oxo-dGMP

dIDP

dITP

IDP

hypoxanthine

cyclic-AMP

dGMP

dAMP

ITP

ppGpp

pppGpp

1-(5-phospho-β-D-ribosyl)-ATP

1-(5-phospho-β-D-ribosyl)-AMP

adenylo-succinate

IMP

GMP

XMP

AMP

5'-deoxyadenosine

guanosine 3'-monophosphate

adenosine 3'-monophosphate

dATP

dADP

dGTP

dGDP

GTP

GDP

ADP

ATP

5-fluorocytosine

5-fluorouracil

2-sulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

2-methylsulfanyl-N⁶-dimethylallyladenosine³⁷ in tRNA

UTP

CTP

CMP

UMP

UDP

CDP

β-nicotinamide D-ribonucleotide

dTDP

dUDP

dCDP

dTMP

dCMP

dUMP

dTTP

dCTP

dUTP

cytidine-3'-monophosphate

uridine 3'-monophosphate

NADH

NADPH

NAD⁺

NADP⁺

uridine 2'3'-cyclic monophosphate

cytidine 2',3'-cyclic monophosphate

cyclic di-3',5'-guanylate

2-hydroxy-dATP

5-hydroxy-CTP

5-hydroxy-CMP

GDP-α-D-glucose

GDP-α-D-rhamnose

GDP-4-dehydro-α-D-rhamnose

GDP-α-D-mannose

ADP-α-D-glucose

preQ₁

adenine

guanine

thymine

cytosine

uracil

CMP-3-deoxy-β-D-manno-octulosonate

UDP-α-D-glucose

dTDP-α-D-glucose

UDP-α-D-galactofuranose

UDP-α-D-galactose

UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine

UDP-3-O-(3-hydroxymyristoyl)-α-D-glucosamine

UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-α-D-glucosamine

UDP-α-D-glucuronate

UDP-N-acetyl-α-D-muramate

UDP-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-D-glutamate

UDP-N-acetyl-α-D-glucosamine-enolpyruvate

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

UDP-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate

UDP-N-acetyl-α-D-glucosamine

dTDP-3-dehydro-6-deoxy-α-D-galactopyranose

dTDP-β-L-rhamnose

dTDP-4-dehydro-β-L-rhamnose

4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol

P¹,P⁴-bis(5'-adenosyl) tetraphosphate

adenosine

inosine

guanosine

xanthosine

cytidine

uridine

2'-deoxycytidine

thymidine

2'-deoxyuridine

(R)-lipoate

coenzyme A

MoO₂-molybdopterin cofactor

thio-molybdenum cofactor

FAD

FADH₂

FMNH₂

FMN

(R)-NADHX

(S)-NADHX

caldariellaquinone

caldariellaquinol

ubiquinol-7

ubiquinol-10

ubiquinol-9

ubiquinol-8

menaquinol-8

demethylmenaquinol-8

3-demethylubiquinol-7

3-demethylubiquinol-10

3-demethylubiquinol-9

3-demethylubiquinol-8

(S)-1-pyrroline-5-carboxylate

precorrin-2

precorrin-1

sirohydrochlorin

6,7-dimethyl-8-(1-D-ribityl)lumazine

reduced riboflavin

cyclic pyranopterin phosphate

7,8-dihydroneopterin 3'-triphosphate

(7,8-dihydropterin-6-yl)methyl diphosphate

2-amino-6-[1-hydroxyethyl]-7-methyl-7,8-dihydropterin

[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate

7,8-dihydroneopterin

7,8-dihydromonapterin

6-(hydroxymethyl)-7,8-dihydropterin

7,8-dihydropteroate

6-carboxy-5,6,7,8-tetrahydropterin

orotate

(+)-dihydrokaempferol

(+)-taxifolin

(+)-dihydromyricetin

kaempferol

quercetin

myricetin

benzene

3-hexaprenyl-4-hydroxybenzoate

salicyl-6-hydroxy-2-cyclohexene-on-oyl

6-hydroxy-2-cyclohexen-one-carboxylate

4-hydroxybenzoate

benzaldehyde

indole

(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate

phenol

2,3-dihydroxybenzoate

8'-(3,4-dihydroxy-5-alkenyl)phenyl-3-[9'E,11'E,13'Z-pentadecatrienyl]catechol

4-methylcatechol

catechol

protocatechuate

3-[(8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl] )catechol

dimeric urushiol peroxide

menadiol

6-methoxy-3-methyl-2-all-trans-octaprenyl-1,4-benzoquinol

2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol

ferulate

salicylate

4-aminobenzoate

benzoate

diacetyl

methylglyoxal

glycolaldehyde

acetaldehyde

formaldehyde

D-glyceraldehyde

aldehydo-D-ribose

β-D-ribofuranose

α-D-ribofuranose

α-D-xylopyranose

α-D-glucopyranose

β-D-glucopyranose

ethanol

methanol

glycerol

L-iditol

D-sorbitol

myo-inositol

1D-myo-inositol 3-monophosphate

1D-myo-inositol 1-monophosphate

3,5-cyclohexadiene-1,2-diol-1-carboxylate

1-(β-D ribofuranosyl)nicotinamide

5-dehydro-4-deoxy-D-glucuronate

4-O-phospho-α-Kdo-(2→6)-lipid IV_A

α-Kdo8N-(2→6)-lipid IV_A

4-O-phospho-α-Kdo8N-(2→6)-lipid IV_A

heptosyl-Kdo₂-lipid A

(heptosyl)₂-Kdo₂-lipid A

α-Kdo-(2→6)-lipid IV_A

isoprimeverose

α,α-trehalose

keto-L-sorbose

keto-D-fructose

N-acetyl-α-D-muramoyl-L-alanine(1-)

N-acetylmuramate

N-acetyl-α-D-glucosamine 1-phosphate

N-acetyl-β-D-mannosamine

N-acetyl-β-D-glucosamine

D-xylulose

β-D-fructofuranose

β-L-fucopyranose

α-L-fucopyranose

4-deoxy-L-threo-hex-4-enopyranuronate

4-deoxy-L-erythro-hex-4-enopyranuronate

decaprenyl-diphospho-N-acetylmuramoyl-pentapeptide

1-O-acetyl-α-maltose

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-glycine) tetrapeptide

a mature peptidoglycan_(n) (meso-DAP containing)

a nascent peptidoglycan with L,D cross links (meso-diaminopimelate containing)

a mature peptidoglycan with L,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a mature peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimelate) tripeptide

a peptidoglycan dimer (E. faecium, tetrapeptide)

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine

a peptidoglycan dimer (E. faeciums)

a peptidoglycan dimer (S. aureus)

a peptidoglycan tetramer with a D,D cross-link (Enterococcus faecium)

a peptidoglycan with D,D cross-link (S. aureus)

a peptidoglycan dimer with pentapeptide stems (meso-diaminopimelate containing)

a peptidoglycan dimer with pentapeptide stem (meso-diaminopimelate containing)

a peptidoglycan dimer (meso-diaminopimelate containing)

a mature peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-L-lysyl-(glycyl)₅-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-[(N-acetyl-β-D-glucosaminyl)-(1,4)-]-N-acetyl-α-D-muramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

ditrans,octacis-undecaprenyldiphospho-N-acetyl-(N-acetylglucosaminyl)muramoyl-L-alanyl-γ-D-isoglutaminyl-N-(β-D-asparaginyl)-L-lysyl-D-alanine

GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-DAP-D-Ala

undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanyl-D-alanine

undecaprenyldiphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

α,α-trehalose 6-phosphate

α-D-glucopyranose 1-phosphate

D-glyceraldehyde 3-phosphate

5-phospho-α-D-ribose 1-diphosphate

1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate

D-erythrose 4-phosphate

D-sedoheptulose 7-phosphate

D-tagatofuranose 1,6-bisphosphate

β-D-fructose 1,6-bisphosphate

keto-L-tagatose 6-phosphate

D-fructose 6-phosphate

D-tagatofuranose 6-phosphate

β-D-fructofuranose 6-phosphate

α-D-glucose 6-phosphate

1-deoxy-D-xylulose 5-phosphate

D-xylulose 5-phosphate

D-arabinofuranose 5-phosphate

aldehydo-D-arabinose 5-phosphate

D-ribulose 5-phosphate

aldehydo-D-ribose 5-phosphate

β-D-ribose 5-phosphate

α-D-ribose 5-phosphate

α-D-ribose-1-phosphate

2-deoxy-α-D-ribose 1-phosphate

β-D-glucopyranose 1-phosphate

β-D-fructofuranose 1-phosphate

α-D-mannose 1-phosphate

D-galactonate

L-gulonate

D-gluconate

(3E,5Z)-tetradeca-3,5-dienoyl-CoA

6-O-trans-methoxy-mycolyl-trehalose 6-phosphate

trehalose-trans-methoxy-mono-mycolate

6-O-cis-methoxy-mycolyl-trehalose 6-phosphate

trehalose-cis-methoxy-mono-mycolate

6-O-trans-keto-mycolyl-trehalose 6-phosphate

trehalose-trans-keto-mono-mycolate

6-O-α-mycolyl-trehalose 6-phosphate

α, α'-trehalose 6-α-mycolate

6-O-cis-keto-mycolyl-trehalose 6-phosphate

trehalose-cis-keto-mono-mycolate

18-hydroxyoleate

16-hydroxypalmitate

18-hydroxystearate

1-(oleoyl)-sn-glycero-3-phosphoethanolamine

1-C16:0-α,ω-dicarboxyl-2-lysophosphatidate

1-oleoyl-sn-glycerol 3-phosphate

1-(18-hydroxyoleoyl)-sn-glycrol 3-phosphate

1-myristoyl-sn-glycerol 3-phosphate

1-palmitoyl-sn-glycerol 3-phosphate

1-cis-vaccenoyl-sn-glycerol-3-phosphate

1-[18-hydroxyoeoyl]-2-[18-hydroxy-lioleoyl]-sn-glycerol 3-phosphate

1,2-dimyristoyl-sn-glycerol 3-phosphate

1-palmitoyl-2-myristoyl phosphatidate

dioleoyl phosphatidate

1,2-dicis-vaccenoyl-phosphatidate

1-cis-vaccenoyl-2-palmitoleoyl-sn-glycerol-3-phosphate

1-palmitoyl-2-cis-vaccenoyl phosphatidate

1-palmitoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

1-myristoyl-2-palmitoleoyl-sn-glycerol 3-phosphate

geranyl diphosphate

trans,octacis-decaprenyl phosphate

di-trans,octa-cis-undecaprenyl phosphate

all-trans-nonaprenyl diphosphate

all-trans-hexaprenyl diphosphate

all-trans-decaprenyl diphosphate

all-trans-octaprenyl diphosphate

all-trans-heptaprenyl diphosphate

di-trans,octa-cis-undecaprenyl diphosphate

3-nonaprenyl-4-hydroxybenzoate

3-decaprenyl-4-hydroxybenzoate

3-octaprenyl-4-hydroxybenzoate

3-heptaprenyl-4-hydroxybenzoate

6-aminopenicillanate

isopenicillin N

penicillin G

(7R)-7 aminocephalosporanate

aklavinone

aklaviketone

ε-rhodomycinone

maggiemycin

3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine

3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine

phosphoribulosylformimino-AICAR-phosphate

5-amino-4-imidazolecarboxyamide

1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide

5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide

5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide

chorismate

fumarate

L-aspartate

succinate

(S)-malate

α,ω-9Z-octadecenedioate

cis-homoaconitate

cis-2-methylaconitate

(2R)-homocitrate

cis-aconitate

(2S,3S)-2-methylcitrate

(2R,3S)-2-methylisocitrate

3-carboxy-cis,cis-muconate

D-threo-isocitrate

3-oxoadipate

3-phenyl-2-oxopropanoate

3-(4-hydroxyphenyl)pyruvate

pyruvate

4-(methylsulfanyl)-2-oxobutanoate

glyoxylate

2-oxoglutarate

2-oxobutanoate

acetate

formate

propanoate

(R)-lactate

decanoate

octanoate

laurate

7-hydroxylaurate

(R)-3-hydroxybutanoate

(15Z)-tetracosenoate

(5Z,8Z,11Z,14Z,17Z)-icosapentaenoate

(3E,5Z)-tetradecadienoate

oleate

palmitate

stearate

α-linolenate

linoleate

di-homo-γ-linolenate

phytenate

(R)-pantoate

L-α-amino-ε-keto-pimelate

L-2-aminoadipate

L-kynurenine

carbamate

L-serine

L-asparagine

glycine

L-glutamine

L-tyrosine

L-threonine

L-cysteine

L-lysine

L-histidine

L-arginine

L-glutamate

L-isoleucine

L-valine

L-phenylalanine

L-selenocysteine

L-leucine

L-proline

L-alanine

L-tryptophan

L-methionine

β-alanine

(S)-3-amino-2-methylpropanoate

D-glutamate

D-lysine

cis-4-hydroxy-D-proline

D-alanine

L-isoglutamine

L,L-diaminopimelate

L-ornithine

L-aspartyl-4-phosphate

L-cystathionine

N-carbamoyl-L-aspartate

formyl-L-isoglutamine

N-formyl-L-glutamate

N-formimino-L-glutamate

N-acetyl-L-ornithine

N-acetyl-L-citrulline

L-2-amino-3-oxobutanoate

seleno-L-homocysteine

3-phospho-L-serine

sarcosine

N-acetyl-L-glutamate

3-hydroxy-L-kynurenine

trans-4-hydroxy-L-proline

O-acetyl-L-homoserine

L-citrulline

L-glutamate-5-semialdehyde

O-phospho-L-homoserine

L-aspartate 4-semialdehyde

L-canaline

hypoglycin A

L-homoserine

O-succinyl-L-homoserine

S-adenosyl-L-homocysteine

S-adenosyl-L-methionine

meso-diaminopimelate

S-(4-hydroxy-nonenal-3-yl)-L-cysteine

hypoglycin B

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine

L-alanyl-γ-D-glutamyl-meso-diaminopimelate

L-cysteinylglycine

D-alanyl-D-alanine

γ-L-glutamyl-L-cysteine

L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine